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KJC3_001311-T1, KJC3_001311-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001311-T1
Unique NameKJC3_001311-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3378486..3379718-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001311-T1 ID=KJC3_001311-T1|Name=KJC3_001311-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1233bp|location=Sequence derived from alignment at ch1:3378486..3379718- (Aspergillus niger KJC3)
ACTTTTGCTACTCCTCCTCCAAAGCATCACCGAGATCCCTCCCCCATCCA
GGCTACCTTCCGGGGTTTAATCACACTCTTCCAAACACAATGCCTGGAAG
TGACGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTCCGGGGGTCTCC
TCTCGGGCGCTGAGACGACCACGGTAAGACCGACGTTTTTCGATTCCGCT
GCTAGTCTTTTGCACATGGCCGAATGCAAGATACTGACCATTGATGCCTC
GATCTTATAGCAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCTA
CCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCC
GTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCATTTCCCTCGAT
GGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGC
TACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACC
CGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGG
CAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACA
AGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCC
CGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGACCAGGCGTGGCG
GATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACA
ACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATT
TTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCAC
GGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAAC
ACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAG
ACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCA
GCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAAATTT
CTTTTACCTGGCGATGGGGTCTTTTACTGGTTAGCTTCGTTCTGTGTTTT
ATTTTGTACAAATAGATTCGAAATATGTATGATGGCATTACGGATTTTCA
AGGATGAAAGTCACGGCATTCTTAGCAGAAACCTACGCCAAGCTGCCCGG
TAATTCGTAAAGATCGATGTAGTTGGAAAGCAC
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Coding sequence (CDS) from alignment at ch1:3378486..3379718-

>KJC3_001311-T1 ID=KJC3_001311-T1|Name=KJC3_001311-T1|organism=Aspergillus niger KJC3|type=CDS|length=1740bp|location=Sequence derived from alignment at ch1:3378486..3379718- (Aspergillus niger KJC3)
CAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCTACCGAGGCCCA
GTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCCGTGTGGAATC
CCGAACCCGTCAAGGCGACACTCTACTCATTTCCCTCGATGGAGCCCCTG
CGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGCTACGCAAAGA
CATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACCCGACAAGGTA
CCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGGCAGGAAGTTG
CATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACAAGAAATCCCC
GATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCCCGCGACTTCT
CTACGGAGCTCCCTCAGAAAATCTACGACCAGGCGTGGCGGATAGCCCTC
AGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACAACGAAATCGC
CCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATTTTCAAGGTCA
ACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCACGGACCAGCCG
AACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAACACGCGAAGAT
CCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAGACTGGACGCT
TGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCAGCATTCCAAG
GATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAAATGCCTGGAAGTGA
CGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTCCGGGGGTCTCCTCT
CGGGCGCTGAGACGACCACGCAACGATGCCTGGCGAAGACTTTCTCCCGC
TCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGGT
TCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCAT
TTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCTC
CTGATGCCGCTACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGGG
TGACATGACCCGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTGC
ATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGT
GTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGG
CCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGACC
AGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGATC
ATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTGT
TGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCAA
CATTGATCACGGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAG
GCTGGCGAACACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGGA
CCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGCA
TTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTG
TACTAAATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCG
CAGCTCCGGGGGTCTCCTCTCGGGCGCTGAGACGACCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001311KJC3_001311Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001311-T1KJC3_001311-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001311-T1.cdsKJC3_001311-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001311-T1.utr3p1KJC3_001311-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001311-T1.exon2KJC3_001311-T1.exon2Aspergillus niger KJC3exon
KJC3_001311-T1.exon1KJC3_001311-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001311-T1.utr5p1KJC3_001311-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264NNY
DBxrefInterPro:IPR013005
DBxrefInterPro:IPR023574
DBxrefInterPro:IPR002136
DBxrefPFAM:PF00573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3378486..3379718 -
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