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KJC3_001314-T1, KJC3_001314-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001314-T1
Unique NameKJC3_001314-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3382716..3383595-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001314-T1 ID=KJC3_001314-T1|Name=KJC3_001314-T1|organism=Aspergillus niger KJC3|type=mRNA|length=880bp|location=Sequence derived from alignment at ch1:3382716..3383595- (Aspergillus niger KJC3)
AACCAAACTACTTCCCTAATATACCTCACTTCTCATATTCGTTTACGAAA
AAAATGACCACCGAAACAACCGACGGCCTCCCCGGCACCGCCAAAACCAC
CAAAAGCCAAGTCCTCGAGGCCGGCGCCAGCGCCATCCAAGACTTCACGC
CCGTGAAGCACATCTGCGCCCACCTGAACGCATTCCACGTCTACGCCTCA
GACAAGACGCGCTGCGTGGAAGCAAACCACTACTGTTCTCACATCACAGA
GGGTATACCCTCCCTCCCCCCTCCTTTCATCCCTAAACACATACATACTC
ACACACCCCGCCTCAACATTTATAGATCTACGACAATGCCTCCTCTATGA
CAGCACCGCGCCGAACGCGCGCCTGCTAGGCATCGAATACATGATCACGC
CCAAACTCTTCGCGACACTACCCGCCGAAGAGAAGAAACTCTGGCACACG
CATGTCTACGAAGTCAGCAGCGGGATGCTAATTATGCCAGCGCCGGCGAT
GGTTCCCAATGCCGTATGGGAAGCAGCCGAGACGGCGGAAATGAAGGATA
TTGTGCCGTTGTATGGCAAGACGTATCATTTCTGGCAGGTGGATCGGGGA
GATCCGGTGCCAATGGGGGCGCCGGAGTTGATGGCGAGTTTCACGAGTGA
GGAGAGGGTCAAGCTGGCTTGTCCGGGGGGATTGGGGGAGTTGGTGAAGG
GGAGGGATGAGAGGTTTGGGACGGATTACAGGGCGAAGGCGGAGAAGAGG
AGGGGGCTTGAGAAGGAGAGTGAAGGGAAGATGATTGAGGGTGAGTTTAT
CCCTTTCTATTTGTTTCTTTGTTGGGTTGGGTATGTGTGCTAATCGGTGT
ATAGGTGCGGATGGGATGTGGGAGGATTGA
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Coding sequence (CDS) from alignment at ch1:3382716..3383595-

>KJC3_001314-T1 ID=KJC3_001314-T1|Name=KJC3_001314-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch1:3382716..3383595- (Aspergillus niger KJC3)
GTGCGGATGGGATGTGGGAGGATTGAATCTACGACAATGCCTCCTCTATG
ACAGCACCGCGCCGAACGCGCGCCTGCTAGGCATCGAATACATGATCACG
CCCAAACTCTTCGCGACACTACCCGCCGAAGAGAAGAAACTCTGGCACAC
GCATGTCTACGAAGTCAGCAGCGGGATGCTAATTATGCCAGCGCCGGCGA
TGGTTCCCAATGCCGTATGGGAAGCAGCCGAGACGGCGGAAATGAAGGAT
ATTGTGCCGTTGTATGGCAAGACGTATCATTTCTGGCAGGTGGATCGGGG
AGATCCGGTGCCAATGGGGGCGCCGGAGTTGATGGCGAGTTTCACGAGTG
AGGAGAGGGTCAAGCTGGCTTGTCCGGGGGGATTGGGGGAGTTGGTGAAG
GGGAGGGATGAGAGGTTTGGGACGGATTACAGGGCGAAGGCGGAGAAGAG
GAGGGGGCTTGAGAAGGAGAGTGAAGGGAAGATGATTGAGGATGACCACC
GAAACAACCGACGGCCTCCCCGGCACCGCCAAAACCACCAAAAGCCAAGT
CCTCGAGGCCGGCGCCAGCGCCATCCAAGACTTCACGCCCGTGAAGCACA
TCTGCGCCCACCTGAACGCATTCCACGTCTACGCCTCAGACAAGACGCGC
TGCGTGGAAGCAAACCACTACTGTTCTCACATCACAGAGGGTGCGGATGG
GATGTGGGAGGATTGAATCTACGACAATGCCTCCTCTATGACAGCACCGC
GCCGAACGCGCGCCTGCTAGGCATCGAATACATGATCACGCCCAAACTCT
TCGCGACACTACCCGCCGAAGAGAAGAAACTCTGGCACACGCATGTCTAC
GAAGTCAGCAGCGGGATGCTAATTATGCCAGCGCCGGCGATGGTTCCCAA
TGCCGTATGGGAAGCAGCCGAGACGGCGGAAATGAAGGATATTGTGCCGT
TGTATGGCAAGACGTATCATTTCTGGCAGGTGGATCGGGGAGATCCGGTG
CCAATGGGGGCGCCGGAGTTGATGGCGAGTTTCACGAGTGAGGAGAGGGT
CAAGCTGGCTTGTCCGGGGGGATTGGGGGAGTTGGTGAAGGGGAGGGATG
AGAGGTTTGGGACGGATTACAGGGCGAAGGCGGAGAAGAGGAGGGGGCTT
GAGAAGGAGAGTGAAGGGAAGATGATTGAGGATGACCACCGAAACAACCG
ACGGCCTCCCCGGCACCGCCAAAACCACCAAAAGCCAAGTCCTCGAGGCC
GGCGCCAGCGCCATCCAAGACTTCACGCCCGTGAAGCACATCTGCGCCCA
CCTGAACGCATTCCACGTCTACGCCTCAGACAAGACGCGCTGCGTGGAAG
CAAACCACTACTGTTCTCACATCACAGAGGGTGCGGATGGGATGTGGGAG
GATTGAATCTACGACAATGCCTCCTCTATGACAGCACCGCGCCGAACGCG
CGCCTGCTAGGCATCGAATACATGATCACGCCCAAACTCTTCGCGACACT
ACCCGCCGAAGAGAAGAAACTCTGGCACACGCATGTCTACGAAGTCAGCA
GCGGGATGCTAATTATGCCAGCGCCGGCGATGGTTCCCAATGCCGTATGG
GAAGCAGCCGAGACGGCGGAAATGAAGGATATTGTGCCGTTGTATGGCAA
GACGTATCATTTCTGGCAGGTGGATCGGGGAGATCCGGTGCCAATGGGGG
CGCCGGAGTTGATGGCGAGTTTCACGAGTGAGGAGAGGGTCAAGCTGGCT
TGTCCGGGGGGATTGGGGGAGTTGGTGAAGGGGAGGGATGAGAGGTTTGG
GACGGATTACAGGGCGAAGGCGGAGAAGAGGAGGGGGCTTGAGAAGGAGA
GTGAAGGGAAGATGATTGAGGATGACCACCGAAACAACCGACGGCCTCCC
CGGCACCGCCAAAACCACCAAAAGCCAAGTCCTCGAGGCCGGCGCCAGCG
CCATCCAAGACTTCACGCCCGTGAAGCACATCTGCGCCCACCTGAACGCA
TTCCACGTCTACGCCTCAGACAAGACGCGCTGCGTGGAAGCAAACCACTA
CTGTTCTCACATCACAGAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001314KJC3_001314Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001314-T1KJC3_001314-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001314-T1.cdsKJC3_001314-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001314-T1.exon3KJC3_001314-T1.exon3Aspergillus niger KJC3exon
KJC3_001314-T1.exon2KJC3_001314-T1.exon2Aspergillus niger KJC3exon
KJC3_001314-T1.exon1KJC3_001314-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001314-T1.utr5p1KJC3_001314-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010686
DBxrefPFAM:PF06884
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3382716..3383595 -
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