You are here

Home

KJC3_001324-T2, KJC3_001324-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001324-T2
Unique NameKJC3_001324-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3414273..3417490-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001324-T2 ID=KJC3_001324-T2|Name=KJC3_001324-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3218bp|location=Sequence derived from alignment at ch1:3414273..3417490- (Aspergillus niger KJC3)
TGTTCATGTGAGCAGCAAAAAAAAAATAATATTGGGAATTTTGGGGATCG
GTTGGAAAATGGATCAATCAAGTTGCTACTGGTCACCGACTCGACTTACG
ACATCCTGAAGTACCCCCCAGCACGTCCACGATACTCCGTGTCCGGTTCT
TCGTCCTATTTATGTCCAGCTCTCGCACTCGGTCTCTGGGGTCTTCTCAT
CGCTTTTCCTATACTACTCATATAACAACCTTCTTCTCCCTCAGCAATTG
ACCCTTCCCGGCTTGCTGTCCGTCCTCCATTCCAATCAGACTCTCCTCCT
GCCCTCAGATCCACTTACCACATCTTCCTCCGTGATCTACAAGGTCATCC
CCATACATCTGAGGTTATCCAGCCAATCGACCGATCCCCCACCTGACAAG
TGACCGTGAGTGCGACTGACAAATGATAATCCCTTCTTCTTCCATTCTCC
AGTTTTTTCGATGCACGAAAATCAGTGGACTGACAGCTGCCGCTCAAACA
GGCGAATCCGACTTCTCCACTTTTTCCCCGCCTTATCCGGATTGTATTCC
GAGCCTACGCGCCATCCCCAGAGATTGCCATTGTCTGCTTTGGTACGCTT
GAAGCGAATTATCCCGATGCGTGTGAGGAGGGAAACTGACAGGCCAAGGT
CATTTAAGCACCGAAGCTCTAGCGATAAAGCGTATATAAAGAGTCGAAGC
AGTCGCCTTTCTGGAAAGTCGACCAGCCGCGATCTCAAGTGTTGAATCTT
GCGCTTATACCCGTACTTCGTCGAACCCCACTTTCGAGCCGGATCGTGTT
CCTACGCGCCCGCCAAACGTCATACACCATCAAGTCCCCAGTTTTTTGTT
GCGATCAACCCTTAGATCTCCCTCCATCATGCAGAGTATGTTCCACACAC
ACCTCTTCTCTGGAGATCTTCTCTTTTTCCTGTTTCCCCTTTGCCCCAGA
ATTTGTGTCCCTCTGCGTCAGACCATGCAATCCAAGATCCGGTTTCCACA
GCCGGCATGAAGTCAGATCTACTCCACAAAATTCACTGGATCAGACACTG
TCCGATACATACGCTAACGCGGCCATCAGCCAAACACTTCTTCTCGGACC
CAACCCATCTGGTCCAGACCGCCCTGAACTCCCTGACTCTCACAAACCCT
TCTCTTGCCTATGACCCCGAAAACAAAATTATTTTCCGTCGTCCGGATAC
GACTTCAAAGTCCAAGGTCGCGATTGTATCTGGAGGAGGATCCGGCCATG
AGCCTGCCTTTGCCGGCTATGTTGGCAAGGGTTTCCTAGATGCCTCGGCC
GCCGGGACCATTTTCGCCTCTCCTTCCGCAGAGCAGATCCGTAAGGCTGT
CATGGACTGCGTCGACAACGAGAAGGGTGTCCTCATCATCCCCATGAACT
ACACTGGTGATGTCCTCAACTTCGGTATGGCTACGGAGAAGGCCCGCGCC
GCCGGTATCAAGACTGAATTCTTCGCCATCAACGACGACGTTGGTGTCGG
CAAGAAGAAGGGCGGCAAGGTCGGCCGTCGCGGTATTAGTGGTGGTATCA
TCATCCTGAAGATCGTCAGCGCGCTGGCCGAAGCTGGGTAAGTTGAGCCC
TTTGAAACTGAGAAGCGTAGGCTAAGACGACTGACTGACTGTACCAGTGG
ATCTCTCGAGGATGTTTACCGCACCGCTCAGTTGGCAAACAAGAACCTCG
TCTCAGTTGGCTCTTCCCTGGAGCACGTCCACGTCCCTGGCAGAGCTCCG
CCAACGGACACCATCCCCGATGGTGAGGTTGAGGTCGGCATGGGCATCCA
CAATGAACCGGGATCTCACCGGGAAAAGTTCGAGCTGACCGAACTGGTCG
CTACCATGCTCCTTCAGCTCTTGGACCACAACGATCCCGACCGCGCCTGG
ATCACTCGCAAGCCCGATGATGACTTTGTGCTGCTGATCAACAATTTGGG
TGGTGTGAGCGCTCTGGAACTTTCGGGCATCACCGATGAGGTCTACCGCC
AGCTGAACAGAGACTACAACGTTCGGCCCATCCGGGTGATCCAGGGAACC
TTCCTCACCAGTCTGAACGGCCTAGGCTTCAGCATTTCCTTGATGAAGCT
CGTGGACTCTGGATTGGGCGAGGGCAAGTCCTTCCTTGAACTCCTTGATG
CCCCCGCTGAGGCGGTTGGCTGGTCTGCTCCCATCCGTCCTGAGACCTGG
GAGCACCGCTCTGATGCTCCTGTTGAGCTGAAGAGGACCAAGATGCCCGA
GGATCAGCCCAGCAACGTCAAGTGTGAGTTCCCGTATCCGGTCGATTATG
GCCGCCTGTTCTCTCCGGCTTGAGCTAACGTGACTCAGTGGATGTTGATT
CCCTCAAGAAGGTCCTGGGCAGTGCACTCAAGCGTGTCATTGCCGCCGAG
CCCGAAGTCACCCGCTTCGACACCATCGTCGGAGACGGAGACTGCGGCGT
AGGCTTGAAGCGTGGCGCCGAGGCCGTCCTTAAGCTCGTCGAAGACCCCT
CCTCTCCGCTCACCGACGATGTCGTGAACGCAGTGAACCGCATCGTCAGC
ATTGTCGAGAACGTCATGGATGGAACCTCCGGAGCCATCTACGCTATCTT
CCTGAACGCCCTGGCCCACGGTCTTCGCGAGCAAGACCGAGGCACCACCA
CCCCCGCCACGGTGGATGTCTGGGCTGCTGCACTGTCCTACTCCCTCACC
GCGCTGTCCCGCTACACCCCTGCCCAACCCGGTGACCGTACCCTCCTGGA
CGCCCTTGTACCCTTCTGCACGCAGCTCCAAAAGGCCAAGGACGTGCACA
TCGCTGCCAAAGCAGCACAGGAAGGCACCGACTCCACCAAGAACATGAAG
GCCAGCCTAGGACGGTCCGTCTACGTCGGCGGCGAAGAAGAATGGGTGGG
CAAGATCCCCGACCCCGGCGCTTACGGACTCAGCGTGTTCCTTAATGGTC
TGTCTGAGGCGCTGTAAGGGAGTTGGAGAGAGAAAAAATGTCACTTGCAG
TTCTTTTCTTTTCTTCGGGGCCAGGGTAAATACATAATTTGCATCCGCTG
GTGATGATATTATGGGTTTTTTTTATTGACTCTTCTTATCTTAATATAAT
TTCATGATGATGAATATGATGATAAATTGGGCGCGTTTTTGCATGTCTGC
TTCTTTGTATTTACTGCTTAGCTTTCAGTATTGAATGGTCAGGATCATGG
TCGGGTTCATCTATCGTA
back to top

Coding sequence (CDS) from alignment at ch1:3414273..3417490-

>KJC3_001324-T2 ID=KJC3_001324-T2|Name=KJC3_001324-T2|organism=Aspergillus niger KJC3|type=CDS|length=5508bp|location=Sequence derived from alignment at ch1:3414273..3417490- (Aspergillus niger KJC3)
TGGATGTTGATTCCCTCAAGAAGGTCCTGGGCAGTGCACTCAAGCGTGTC
ATTGCCGCCGAGCCCGAAGTCACCCGCTTCGACACCATCGTCGGAGACGG
AGACTGCGGCGTAGGCTTGAAGCGTGGCGCCGAGGCCGTCCTTAAGCTCG
TCGAAGACCCCTCCTCTCCGCTCACCGACGATGTCGTGAACGCAGTGAAC
CGCATCGTCAGCATTGTCGAGAACGTCATGGATGGAACCTCCGGAGCCAT
CTACGCTATCTTCCTGAACGCCCTGGCCCACGGTCTTCGCGAGCAAGACC
GAGGCACCACCACCCCCGCCACGGTGGATGTCTGGGCTGCTGCACTGTCC
TACTCCCTCACCGCGCTGTCCCGCTACACCCCTGCCCAACCCGGTGACCG
TACCCTCCTGGACGCCCTTGTACCCTTCTGCACGCAGCTCCAAAAGGCCA
AGGACGTGCACATCGCTGCCAAAGCAGCACAGGAAGGCACCGACTCCACC
AAGAACATGAAGGCCAGCCTAGGACGGTCCGTCTACGTCGGCGGCGAAGA
AGAATGGGTGGGCAAGATCCCCGACCCCGGCGCTTACGGACTCAGCGTGT
TCCTTAATGGTCTGTCTGAGGCGCTGTAATGGATCTCTCGAGGATGTTTA
CCGCACCGCTCAGTTGGCAAACAAGAACCTCGTCTCAGTTGGCTCTTCCC
TGGAGCACGTCCACGTCCCTGGCAGAGCTCCGCCAACGGACACCATCCCC
GATGGTGAGGTTGAGGTCGGCATGGGCATCCACAATGAACCGGGATCTCA
CCGGGAAAAGTTCGAGCTGACCGAACTGGTCGCTACCATGCTCCTTCAGC
TCTTGGACCACAACGATCCCGACCGCGCCTGGATCACTCGCAAGCCCGAT
GATGACTTTGTGCTGCTGATCAACAATTTGGGTGGTGTGAGCGCTCTGGA
ACTTTCGGGCATCACCGATGAGGTCTACCGCCAGCTGAACAGAGACTACA
ACGTTCGGCCCATCCGGGTGATCCAGGGAACCTTCCTCACCAGTCTGAAC
GGCCTAGGCTTCAGCATTTCCTTGATGAAGCTCGTGGACTCTGGATTGGG
CGAGGGCAAGTCCTTCCTTGAACTCCTTGATGCCCCCGCTGAGGCGGTTG
GCTGGTCTGCTCCCATCCGTCCTGAGACCTGGGAGCACCGCTCTGATGCT
CCTGTTGAGCTGAAGAGGACCAAGATGCCCGAGGATCAGCCCAGCAACGT
CAAGTATGAAGTCAGATCTACTCCACAAAATTCACTGGATCAGACACTGT
CCGATACATACGCTAACGCGGCCATCAGCCAAACACTTCTTCTCGGACCC
AACCCATCTGGTCCAGACCGCCCTGAACTCCCTGACTCTCACAAACCCTT
CTCTTGCCTATGACCCCGAAAACAAAATTATTTTCCGTCGTCCGGATACG
ACTTCAAAGTCCAAGGTCGCGATTGTATCTGGAGGAGGATCCGGCCATGA
GCCTGCCTTTGCCGGCTATGTTGGCAAGGGTTTCCTAGATGCCTCGGCCG
CCGGGACCATTTTCGCCTCTCCTTCCGCAGAGCAGATCCGTAAGGCTGTC
ATGGACTGCGTCGACAACGAGAAGGGTGTCCTCATCATCCCCATGAACTA
CACTGGTGATGTCCTCAACTTCGGTATGGCTACGGAGAAGGCCCGCGCCG
CCGGTATCAAGACTGAATTCTTCGCCATCAACGACGACGTTGGTGTCGGC
AAGAAGAAGGGCGGCAAGGTCGGCCGTCGCGGTATTAGTGGTGGTATCAT
CATCCTGAAGATCGTCAGCGCGCTGGCCGAAGCTGGTGGATGTTGATTCC
CTCAAGAAGGTCCTGGGCAGTGCACTCAAGCGTGTCATTGCCGCCGAGCC
CGAAGTCACCCGCTTCGACACCATCGTCGGAGACGGAGACTGCGGCGTAG
GCTTGAAGCGTGGCGCCGAGGCCGTCCTTAAGCTCGTCGAAGACCCCTCC
TCTCCGCTCACCGACGATGTCGTGAACGCAGTGAACCGCATCGTCAGCAT
TGTCGAGAACGTCATGGATGGAACCTCCGGAGCCATCTACGCTATCTTCC
TGAACGCCCTGGCCCACGGTCTTCGCGAGCAAGACCGAGGCACCACCACC
CCCGCCACGGTGGATGTCTGGGCTGCTGCACTGTCCTACTCCCTCACCGC
GCTGTCCCGCTACACCCCTGCCCAACCCGGTGACCGTACCCTCCTGGACG
CCCTTGTACCCTTCTGCACGCAGCTCCAAAAGGCCAAGGACGTGCACATC
GCTGCCAAAGCAGCACAGGAAGGCACCGACTCCACCAAGAACATGAAGGC
CAGCCTAGGACGGTCCGTCTACGTCGGCGGCGAAGAAGAATGGGTGGGCA
AGATCCCCGACCCCGGCGCTTACGGACTCAGCGTGTTCCTTAATGGTCTG
TCTGAGGCGCTGTAATGGATCTCTCGAGGATGTTTACCGCACCGCTCAGT
TGGCAAACAAGAACCTCGTCTCAGTTGGCTCTTCCCTGGAGCACGTCCAC
GTCCCTGGCAGAGCTCCGCCAACGGACACCATCCCCGATGGTGAGGTTGA
GGTCGGCATGGGCATCCACAATGAACCGGGATCTCACCGGGAAAAGTTCG
AGCTGACCGAACTGGTCGCTACCATGCTCCTTCAGCTCTTGGACCACAAC
GATCCCGACCGCGCCTGGATCACTCGCAAGCCCGATGATGACTTTGTGCT
GCTGATCAACAATTTGGGTGGTGTGAGCGCTCTGGAACTTTCGGGCATCA
CCGATGAGGTCTACCGCCAGCTGAACAGAGACTACAACGTTCGGCCCATC
CGGGTGATCCAGGGAACCTTCCTCACCAGTCTGAACGGCCTAGGCTTCAG
CATTTCCTTGATGAAGCTCGTGGACTCTGGATTGGGCGAGGGCAAGTCCT
TCCTTGAACTCCTTGATGCCCCCGCTGAGGCGGTTGGCTGGTCTGCTCCC
ATCCGTCCTGAGACCTGGGAGCACCGCTCTGATGCTCCTGTTGAGCTGAA
GAGGACCAAGATGCCCGAGGATCAGCCCAGCAACGTCAAGTATGAAGTCA
GATCTACTCCACAAAATTCACTGGATCAGACACTGTCCGATACATACGCT
AACGCGGCCATCAGCCAAACACTTCTTCTCGGACCCAACCCATCTGGTCC
AGACCGCCCTGAACTCCCTGACTCTCACAAACCCTTCTCTTGCCTATGAC
CCCGAAAACAAAATTATTTTCCGTCGTCCGGATACGACTTCAAAGTCCAA
GGTCGCGATTGTATCTGGAGGAGGATCCGGCCATGAGCCTGCCTTTGCCG
GCTATGTTGGCAAGGGTTTCCTAGATGCCTCGGCCGCCGGGACCATTTTC
GCCTCTCCTTCCGCAGAGCAGATCCGTAAGGCTGTCATGGACTGCGTCGA
CAACGAGAAGGGTGTCCTCATCATCCCCATGAACTACACTGGTGATGTCC
TCAACTTCGGTATGGCTACGGAGAAGGCCCGCGCCGCCGGTATCAAGACT
GAATTCTTCGCCATCAACGACGACGTTGGTGTCGGCAAGAAGAAGGGCGG
CAAGGTCGGCCGTCGCGGTATTAGTGGTGGTATCATCATCCTGAAGATCG
TCAGCGCGCTGGCCGAAGCTGGTGGATGTTGATTCCCTCAAGAAGGTCCT
GGGCAGTGCACTCAAGCGTGTCATTGCCGCCGAGCCCGAAGTCACCCGCT
TCGACACCATCGTCGGAGACGGAGACTGCGGCGTAGGCTTGAAGCGTGGC
GCCGAGGCCGTCCTTAAGCTCGTCGAAGACCCCTCCTCTCCGCTCACCGA
CGATGTCGTGAACGCAGTGAACCGCATCGTCAGCATTGTCGAGAACGTCA
TGGATGGAACCTCCGGAGCCATCTACGCTATCTTCCTGAACGCCCTGGCC
CACGGTCTTCGCGAGCAAGACCGAGGCACCACCACCCCCGCCACGGTGGA
TGTCTGGGCTGCTGCACTGTCCTACTCCCTCACCGCGCTGTCCCGCTACA
CCCCTGCCCAACCCGGTGACCGTACCCTCCTGGACGCCCTTGTACCCTTC
TGCACGCAGCTCCAAAAGGCCAAGGACGTGCACATCGCTGCCAAAGCAGC
ACAGGAAGGCACCGACTCCACCAAGAACATGAAGGCCAGCCTAGGACGGT
CCGTCTACGTCGGCGGCGAAGAAGAATGGGTGGGCAAGATCCCCGACCCC
GGCGCTTACGGACTCAGCGTGTTCCTTAATGGTCTGTCTGAGGCGCTGTA
ATGGATCTCTCGAGGATGTTTACCGCACCGCTCAGTTGGCAAACAAGAAC
CTCGTCTCAGTTGGCTCTTCCCTGGAGCACGTCCACGTCCCTGGCAGAGC
TCCGCCAACGGACACCATCCCCGATGGTGAGGTTGAGGTCGGCATGGGCA
TCCACAATGAACCGGGATCTCACCGGGAAAAGTTCGAGCTGACCGAACTG
GTCGCTACCATGCTCCTTCAGCTCTTGGACCACAACGATCCCGACCGCGC
CTGGATCACTCGCAAGCCCGATGATGACTTTGTGCTGCTGATCAACAATT
TGGGTGGTGTGAGCGCTCTGGAACTTTCGGGCATCACCGATGAGGTCTAC
CGCCAGCTGAACAGAGACTACAACGTTCGGCCCATCCGGGTGATCCAGGG
AACCTTCCTCACCAGTCTGAACGGCCTAGGCTTCAGCATTTCCTTGATGA
AGCTCGTGGACTCTGGATTGGGCGAGGGCAAGTCCTTCCTTGAACTCCTT
GATGCCCCCGCTGAGGCGGTTGGCTGGTCTGCTCCCATCCGTCCTGAGAC
CTGGGAGCACCGCTCTGATGCTCCTGTTGAGCTGAAGAGGACCAAGATGC
CCGAGGATCAGCCCAGCAACGTCAAGTATGAAGTCAGATCTACTCCACAA
AATTCACTGGATCAGACACTGTCCGATACATACGCTAACGCGGCCATCAG
CCAAACACTTCTTCTCGGACCCAACCCATCTGGTCCAGACCGCCCTGAAC
TCCCTGACTCTCACAAACCCTTCTCTTGCCTATGACCCCGAAAACAAAAT
TATTTTCCGTCGTCCGGATACGACTTCAAAGTCCAAGGTCGCGATTGTAT
CTGGAGGAGGATCCGGCCATGAGCCTGCCTTTGCCGGCTATGTTGGCAAG
GGTTTCCTAGATGCCTCGGCCGCCGGGACCATTTTCGCCTCTCCTTCCGC
AGAGCAGATCCGTAAGGCTGTCATGGACTGCGTCGACAACGAGAAGGGTG
TCCTCATCATCCCCATGAACTACACTGGTGATGTCCTCAACTTCGGTATG
GCTACGGAGAAGGCCCGCGCCGCCGGTATCAAGACTGAATTCTTCGCCAT
CAACGACGACGTTGGTGTCGGCAAGAAGAAGGGCGGCAAGGTCGGCCGTC
GCGGTATTAGTGGTGGTATCATCATCCTGAAGATCGTCAGCGCGCTGGCC
GAAGCTGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004371glycerone kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006071glycerol metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001324KJC3_001324Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001324-T2KJC3_001324-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001324-T2.cdsKJC3_001324-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001324-T2.utr3p1KJC3_001324-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001324-T2.exon3KJC3_001324-T2.exon3Aspergillus niger KJC3exon
KJC3_001324-T2.exon2KJC3_001324-T2.exon2Aspergillus niger KJC3exon
KJC3_001324-T2.exon1KJC3_001324-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001324-T2.utr5p1KJC3_001324-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004006
DBxrefInterPro:IPR036117
DBxrefInterPro:IPR012734
DBxrefInterPro:IPR004007
DBxrefPFAM:PF02734
DBxrefPFAM:PF02733
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3414273..3417490 -
Powered by Drupal