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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3439117..3440700+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001328-T1 ID=KJC3_001328-T1|Name=KJC3_001328-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1584bp|location=Sequence derived from alignment at ch1:3439117..3440700+ (Aspergillus niger KJC3)
ATGTCGTCTACCTCTGCACCTAACCGGGGCCTGGTGGTCTTCTCCGGAGG
CAGTGCCGCGAATAACCTCGTTGACGTGTTCAATGCCGTGCGCGGGAGCA
AACACTGCTCCCTTAGCTACATCATCCCCATCAGCGACAATGGAGGCTCC
TCATCCGAGTTGATCCGCATCTTTGGTGGCCCTGGCATTGGAGACGTGCG
CAGTGAGTCACATACCAACTTCCACCCTATCTCACATCTCTAACCAAACC
AACCAGGCCGCCTAGTCCGACTGATCCCTGAATCGCCCCCCAACTCTGAA
CGAGCAGCCATCAAAGCTCTCTTCAACCATCGGCTCCCAGCCGACCCCAG
TCTCGCTCACGCAGAGTGGCACTCCATTGTGGATGGCACCTCCATCCTCT
GGGCCGCCATCACTCCAGCCAAACGGGAACTGATCCGTTCCTTCTTCAAC
CTCCTGAACCTGGAGATCCTGAAGCGTGCCCGACCCCCAACTTCTACCTT
CGAATTCACCTCTGCCAGCGTAGGCAATCTATTTCTCACCGGAGCCCGCC
TTTTCAGCGGTAGCTTCGAAAGCGCCATCTACCTCCTAGGCAGCATCGGC
GGCGTACCCTGGGACCTCGTCCGGGTCATCCCAGCCATCAATTCCAACTT
CTCACACCACATCTCCGCCTCTCTGGCCAACGGAACCGTCATTGTAGGTC
AAAACAGCATCTCACATCCCTGCGAAGCTATCCCCCTTCGCTCTCCTCGG
CCTCTCCTCGCCGACGGCACAGAAAACTCTCCCCACCACCCTTCATCAAC
ACCGACGCCACTCTACTTCGAAGACGACGACCACCCCCCAGGCTTCCTCC
CCACTCTCCGCCACAAGAACATCTCCTTCAGCAAATCTGACACCCAGGAC
CTCCCCTCCCGCATCTCCCGCATCTGGTACATCAATCCCTACGGCCAGGA
AATCCAACCCCCGGCTAACCCCCGCGTCATTGAATCCCTCCATGACGCCC
AAGCTATCATATATAGCATTGGATCCTTGTACACCTCCATCATCCCATCC
ATTATTCTTCGTGGCGTCGGCCAAGCCATCGCTACCGGTCCAGCGAGGCA
TAAAATCCTCATCTTGAACGGGTCCCTCGATCGCGAGACAGGACCGTCTC
ATGAGCCGTTTACGGCGGCGGACTTTGTAGAGGCTATTACGAGGGCTGGG
GAGGAGAGTCGGGGTAGGGGGCCTTTGAATTTGGACCCTTCTGCTGGCGC
TGGTGCTGTGGAAGATGGAGACAAGAGAAAGGAGGATGAGCGACTCCCGT
ATTCGGCGTATGTTACGCATGTTCTGCATCTGGATGGACCGGGTACTCCC
CGCGTCGATAAGGATCGGCTTGCTGAGATGGGTATCGAGACGTTGCGGCT
GTATGGGAGGAAGATTGTTGGCGCTGCTGGAGAGGATGTGGCTCTTGGGA
TGCGGTATGATTCGACGGCGTTGGTGCAGGCGCTGGAGGTGGTGTTGGGA
AAGAAGGGAGATGCTATGTTGAGGGGGAAGGATAGGAGTGGGATGAGTCG
GAGGAATACGCTGGATCCGGGGAGGAGGGATTAG back to topCoding sequence (CDS) from alignment at ch1:3439117..3440700+ >KJC3_001328-T1 ID=KJC3_001328-T1|Name=KJC3_001328-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch1:3439117..3440700+ (Aspergillus niger KJC3)
ATGTCGTCTACCTCTGCACCTAACCGGGGCCTGGTGGTCTTCTCCGGAGG
CAGTGCCGCGAATAACCTCGTTGACGTGTTCAATGCCGTGCGCGGGAGCA
AACACTGCTCCCTTAGCTACATCATCCCCATCAGCGACAATGGAGGCTCC
TCATCCGAGTTGATCCGCATCTTTGGTGGCCCTGGCATTGGAGACGTGCG
CAGCCGCCTAGTCCGACTGATCCCTGAATCGCCCCCCAACTCTGAACGAG
CAGCCATCAAAGCTCTCTTCAACCATCGGCTCCCAGCCGACCCCAGTCTC
GCTCACGCAGAGTGGCACTCCATTGTGGATGGCACCTCCATCCTCTGGGC
CGCCATCACTCCAGCCAAACGGGAACTGATCCGTTCCTTCTTCAACCTCC
TGAACCTGGAGATCCTGAAGCGTGCCCGACCCCCAACTTCTACCTTCGAA
TTCACCTCTGCCAGCGTAGGCAATCTATTTCTCACCGGAGCCCGCCTTTT
CAGCGGTAGCTTCGAAAGCGCCATCTACCTCCTAGGCAGCATCGGCGGCG
TACCCTGGGACCTCGTCCGGGTCATCCCAGCCATCAATTCCAACTTCTCA
CACCACATCTCCGCCTCTCTGGCCAACGGAACCGTCATTGTAGGTCAAAA
CAGCATCTCACATCCCTGCGAAGCTATCCCCCTTCGCTCTCCTCGGCCTC
TCCTCGCCGACGGCACAGAAAACTCTCCCCACCACCCTTCATCAACACCG
ACGCCACTCTACTTCGAAGACGACGACCACCCCCCAGGCTTCCTCCCCAC
TCTCCGCCACAAGAACATCTCCTTCAGCAAATCTGACACCCAGGACCTCC
CCTCCCGCATCTCCCGCATCTGGTACATCAATCCCTACGGCCAGGAAATC
CAACCCCCGGCTAACCCCCGCGTCATTGAATCCCTCCATGACGCCCAAGC
TATCATATATAGCATTGGATCCTTGTACACCTCCATCATCCCATCCATTA
TTCTTCGTGGCGTCGGCCAAGCCATCGCTACCGGTCCAGCGAGGCATAAA
ATCCTCATCTTGAACGGGTCCCTCGATCGCGAGACAGGACCGTCTCATGA
GCCGTTTACGGCGGCGGACTTTGTAGAGGCTATTACGAGGGCTGGGGAGG
AGAGTCGGGGTAGGGGGCCTTTGAATTTGGACCCTTCTGCTGGCGCTGGT
GCTGTGGAAGATGGAGACAAGAGAAAGGAGGATGAGCGACTCCCGTATTC
GGCGTATGTTACGCATGTTCTGCATCTGGATGGACCGGGTACTCCCCGCG
TCGATAAGGATCGGCTTGCTGAGATGGGTATCGAGACGTTGCGGCTGTAT
GGGAGGAAGATTGTTGGCGCTGCTGGAGAGGATGTGGCTCTTGGGATGCG
GTATGATTCGACGGCGTTGGTGCAGGCGCTGGAGGTGGTGTTGGGAAAGA
AGGGAGATGCTATGTTGAGGGGGAAGGATAGGAGTGGGATGAGTCGGAGG
AATACGCTGGATCCGGGGAGGAGGGATTAGATGTCGTCTACCTCTGCACC
TAACCGGGGCCTGGTGGTCTTCTCCGGAGGCAGTGCCGCGAATAACCTCG
TTGACGTGTTCAATGCCGTGCGCGGGAGCAAACACTGCTCCCTTAGCTAC
ATCATCCCCATCAGCGACAATGGAGGCTCCTCATCCGAGTTGATCCGCAT
CTTTGGTGGCCCTGGCATTGGAGACGTGCGCAGCCGCCTAGTCCGACTGA
TCCCTGAATCGCCCCCCAACTCTGAACGAGCAGCCATCAAAGCTCTCTTC
AACCATCGGCTCCCAGCCGACCCCAGTCTCGCTCACGCAGAGTGGCACTC
CATTGTGGATGGCACCTCCATCCTCTGGGCCGCCATCACTCCAGCCAAAC
GGGAACTGATCCGTTCCTTCTTCAACCTCCTGAACCTGGAGATCCTGAAG
CGTGCCCGACCCCCAACTTCTACCTTCGAATTCACCTCTGCCAGCGTAGG
CAATCTATTTCTCACCGGAGCCCGCCTTTTCAGCGGTAGCTTCGAAAGCG
CCATCTACCTCCTAGGCAGCATCGGCGGCGTACCCTGGGACCTCGTCCGG
GTCATCCCAGCCATCAATTCCAACTTCTCACACCACATCTCCGCCTCTCT
GGCCAACGGAACCGTCATTGTAGGTCAAAACAGCATCTCACATCCCTGCG
AAGCTATCCCCCTTCGCTCTCCTCGGCCTCTCCTCGCCGACGGCACAGAA
AACTCTCCCCACCACCCTTCATCAACACCGACGCCACTCTACTTCGAAGA
CGACGACCACCCCCCAGGCTTCCTCCCCACTCTCCGCCACAAGAACATCT
CCTTCAGCAAATCTGACACCCAGGACCTCCCCTCCCGCATCTCCCGCATC
TGGTACATCAATCCCTACGGCCAGGAAATCCAACCCCCGGCTAACCCCCG
CGTCATTGAATCCCTCCATGACGCCCAAGCTATCATATATAGCATTGGAT
CCTTGTACACCTCCATCATCCCATCCATTATTCTTCGTGGCGTCGGCCAA
GCCATCGCTACCGGTCCAGCGAGGCATAAAATCCTCATCTTGAACGGGTC
CCTCGATCGCGAGACAGGACCGTCTCATGAGCCGTTTACGGCGGCGGACT
TTGTAGAGGCTATTACGAGGGCTGGGGAGGAGAGTCGGGGTAGGGGGCCT
TTGAATTTGGACCCTTCTGCTGGCGCTGGTGCTGTGGAAGATGGAGACAA
GAGAAAGGAGGATGAGCGACTCCCGTATTCGGCGTATGTTACGCATGTTC
TGCATCTGGATGGACCGGGTACTCCCCGCGTCGATAAGGATCGGCTTGCT
GAGATGGGTATCGAGACGTTGCGGCTGTATGGGAGGAAGATTGTTGGCGC
TGCTGGAGAGGATGTGGCTCTTGGGATGCGGTATGATTCGACGGCGTTGG
TGCAGGCGCTGGAGGTGGTGTTGGGAAAGAAGGGAGATGCTATGTTGAGG
GGGAAGGATAGGAGTGGGATGAGTCGGAGGAATACGCTGGATCCGGGGAG
GAGGGATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002882 |
| DBxref | PFAM:PF01933 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3439117..3440700 + |
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