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KJC3_001335-T1, KJC3_001335-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001335-T1
Unique NameKJC3_001335-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3457028..3457726-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001335-T1 ID=KJC3_001335-T1|Name=KJC3_001335-T1|organism=Aspergillus niger KJC3|type=mRNA|length=699bp|location=Sequence derived from alignment at ch1:3457028..3457726- (Aspergillus niger KJC3)
ATGAGGAGGTGCCGCTTGTTGTGGTCTTGGCGGGCCAGATCCCTGTCAGA
CTCTGTAGCCTTTTTCACCATCCATGTCCCGCGTCTGCTGTGCACGCTGC
AGCTTGGATCCCTCCCCCCTTCCTTTCGTTCGCTTAGCTTCACGCTCGAG
TCTCTCCTTTTCCACCCTCTCGACCTCGACATGGCCGACACCGAGGATGC
GGGCACATCGTCCGTCTCCGAACCCTTAGATCTGGTGCGCCTGTCGCTCG
ATGAAATCGTCTTTGTCAAACTGCGCGGCGATCGCGAGCTCAAGGGTCGT
CTCCATGTGAGTCTTACGCCGACCTCCGACTTCTGACTACGTGGCGTTTT
ACTGACATATGGTCTGTGGTAGGCATACGATAGCCATTGCAACCTGGTGC
TAGGAGATGTTGAGGAGACCATCTACGTGGTGGAGGAAGACGAGAACGAG
CAAGAGACCCTCCGAGTACGTCGCTCTATCCATCTACCTCGGTTATAGTA
CAACCAGTTAGGGGGGAGGCTATATTAGTGCGGTGCTGGGCTAACGCAGA
ATGATCGTCTTTAGACCATCAAGAAGCAAGAAGAGATGCTCTTCGTTCGA
GGTGCGTTTTGTGATGCCGTTCCCGGCAGAGCCCGGGGCTTGTCATACTG
ACCTTTCGTAATAGGAGACTCCGTCGTTCTGATTTCGCCTCAGGCATAA
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Coding sequence (CDS) from alignment at ch1:3457028..3457726-

>KJC3_001335-T1 ID=KJC3_001335-T1|Name=KJC3_001335-T1|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at ch1:3457028..3457726- (Aspergillus niger KJC3)
GAGACTCCGTCGTTCTGATTTCGCCTCAGGCATAAACCATCAAGAAGCAA
GAAGAGATGCTCTTCGTTCGAGGCATACGATAGCCATTGCAACCTGGTGC
TAGGAGATGTTGAGGAGACCATCTACGTGGTGGAGGAAGACGAGAACGAG
CAAGAGACCCTCCGAATGAGGAGGTGCCGCTTGTTGTGGTCTTGGCGGGC
CAGATCCCTGTCAGACTCTGTAGCCTTTTTCACCATCCATGTCCCGCGTC
TGCTGTGCACGCTGCAGCTTGGATCCCTCCCCCCTTCCTTTCGTTCGCTT
AGCTTCACGCTCGAGTCTCTCCTTTTCCACCCTCTCGACCTCGACATGGC
CGACACCGAGGATGCGGGCACATCGTCCGTCTCCGAACCCTTAGATCTGG
TGCGCCTGTCGCTCGATGAAATCGTCTTTGTCAAACTGCGCGGCGATCGC
GAGCTCAAGGGTCGTCTCCATGAGACTCCGTCGTTCTGATTTCGCCTCAG
GCATAAACCATCAAGAAGCAAGAAGAGATGCTCTTCGTTCGAGGCATACG
ATAGCCATTGCAACCTGGTGCTAGGAGATGTTGAGGAGACCATCTACGTG
GTGGAGGAAGACGAGAACGAGCAAGAGACCCTCCGAATGAGGAGGTGCCG
CTTGTTGTGGTCTTGGCGGGCCAGATCCCTGTCAGACTCTGTAGCCTTTT
TCACCATCCATGTCCCGCGTCTGCTGTGCACGCTGCAGCTTGGATCCCTC
CCCCCTTCCTTTCGTTCGCTTAGCTTCACGCTCGAGTCTCTCCTTTTCCA
CCCTCTCGACCTCGACATGGCCGACACCGAGGATGCGGGCACATCGTCCG
TCTCCGAACCCTTAGATCTGGTGCGCCTGTCGCTCGATGAAATCGTCTTT
GTCAAACTGCGCGGCGATCGCGAGCTCAAGGGTCGTCTCCATGAGACTCC
GTCGTTCTGATTTCGCCTCAGGCATAAACCATCAAGAAGCAAGAAGAGAT
GCTCTTCGTTCGAGGCATACGATAGCCATTGCAACCTGGTGCTAGGAGAT
GTTGAGGAGACCATCTACGTGGTGGAGGAAGACGAGAACGAGCAAGAGAC
CCTCCGAATGAGGAGGTGCCGCTTGTTGTGGTCTTGGCGGGCCAGATCCC
TGTCAGACTCTGTAGCCTTTTTCACCATCCATGTCCCGCGTCTGCTGTGC
ACGCTGCAGCTTGGATCCCTCCCCCCTTCCTTTCGTTCGCTTAGCTTCAC
GCTCGAGTCTCTCCTTTTCCACCCTCTCGACCTCGACATGGCCGACACCG
AGGATGCGGGCACATCGTCCGTCTCCGAACCCTTAGATCTGGTGCGCCTG
TCGCTCGATGAAATCGTCTTTGTCAAACTGCGCGGCGATCGCGAGCTCAA
GGGTCGTCTCCATGAGACTCCGTCGTTCTGATTTCGCCTCAGGCATAAAC
CATCAAGAAGCAAGAAGAGATGCTCTTCGTTCGAGGCATACGATAGCCAT
TGCAACCTGGTGCTAGGAGATGTTGAGGAGACCATCTACGTGGTGGAGGA
AGACGAGAACGAGCAAGAGACCCTCCGAATGAGGAGGTGCCGCTTGTTGT
GGTCTTGGCGGGCCAGATCCCTGTCAGACTCTGTAGCCTTTTTCACCATC
CATGTCCCGCGTCTGCTGTGCACGCTGCAGCTTGGATCCCTCCCCCCTTC
CTTTCGTTCGCTTAGCTTCACGCTCGAGTCTCTCCTTTTCCACCCTCTCG
ACCTCGACATGGCCGACACCGAGGATGCGGGCACATCGTCCGTCTCCGAA
CCCTTAGATCTGGTGCGCCTGTCGCTCGATGAAATCGTCTTTGTCAAACT
GCGCGGCGATCGCGAGCTCAAGGGTCGTCTCCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000956nuclear-transcribed mRNA catabolic process
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001335KJC3_001335Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001335-T1KJC3_001335-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001335-T1.cdsKJC3_001335-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001335-T1.exon4KJC3_001335-T1.exon4Aspergillus niger KJC3exon
KJC3_001335-T1.exon3KJC3_001335-T1.exon3Aspergillus niger KJC3exon
KJC3_001335-T1.exon2KJC3_001335-T1.exon2Aspergillus niger KJC3exon
KJC3_001335-T1.exon1KJC3_001335-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034105
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3457028..3457726 -
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