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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3476108..3478760+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001340-T1 ID=KJC3_001340-T1|Name=KJC3_001340-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2653bp|location=Sequence derived from alignment at ch1:3476108..3478760+ (Aspergillus niger KJC3)
CTGAAACTTCCCATCATGAAATGGAGATATATTTATCAGCCCCAGAATTC
CCCTTTGATGGATCGGGGAAATTATTCTTCTTCTTCTTGATCTTTTGTGA
TCATTCCTGTCTACTGCCTTCTACCAAACTCACTAAACTGTCCTCGGTCC
TCCGTGCTACATACTACATACTACTTACTGTTCTCATCCGCTCCCGTCAC
TTTCACACTGGAAACGGGGCATGTGTGATTTGATTCACATTGGACTGGAC
TCAACTGGACTTGATTCAACTCTGGCAACACTAACTGGACGGGACTGAAT
TGACCCTCTTCTTCCCTCTCTGTCTCCTTCTCCTGTCTTTCTCATCGTCA
CCCTCTCTCCTCCTGTTTCCCTTCTCCTTCTCCCTCCCTCCCTCCCTCTC
TCTCTCCAACCCTTCTCCTGTTCCATCTTTGGTTTCCACTCCTATCTTCT
CCTCCTCCACTCTCCATTTCCCGTCAATCATCCCTTCAGTTCTTTGTGAG
CAAATCAACCAGTAAATTCCTCCACGATGGGTAGTCTCTGGGAGTCTCCC
ACTTTGGGCGATCCCTTCAACCTCACCTCCCCCGACAATCAGCTGGACCA
GGTCAACAACCACGGCAACAACCATGGTGCCGGTTTCTACACCGACTTGT
TGACCTTCGCCTTTCGGGGCCCAGTCCACTATGACCGGCAACAGCCAATA
TTCATCGACGCTGAGGACGCTACGCGATTCTTCAACGCGTTGCAGTTCGA
GACGCTGGTTCGAGCGCTGATTGCTGGCCTCAAAGCCCACAACGTACAGC
CTGGCGATTGTGTCTTGGTCCACCTGGGCAATAGTGTAAGTAGTAGTCAT
CTAATCATCTTCCTCCCCTGACTGGCCCGCTTATCAAATCTCCCTCCCCC
CAATACTACTTAACTCAACCTCGACATCTCTGCCCCTCCCCCCACCTCAC
CACCCTCCTGTTCTCTGTTCTCGTCCATTTGATTTGTTACCTGTTTCTCC
ATCATGTTGTCGTCATCCCATCATGCCCCTCCATCATCCTCTTCTCACTG
ACTCATGGCGTGGTAGATCATATACCCCGCGCTGTTCTTCAGTATCATCG
GCGCTGGCGGTGTGTTCATGGGCTCCAATGCGCGCAGCCAACCACAAGAA
CTGGAGCATATTCTGCAACTGGCGGAGCCAAAGCTGATCATCACCTCGTC
CGATGCACTGCCCACGGTGCTGAGCGTGTCAGCCGACCGCGGAATGCATC
CCAGCCAGGTGTGTTTGGTGGACGAAGCTGCAGGGGATTACATCGCCCAA
TACTTCCTCGCCGGACCATTGGCCTATGCGACTGCCGGCACCTCCTACCT
ACTACCGAGTAGTGGGGGCGGCTCTTTGGTGAACTTCGCCCACCTTCTGG
CGTATGGCGAAAGTGATTGGGTGGCCTTTGATGACGAGAGGATCGCCAAA
TCGACGCCGGCCGCCATGTTCTCCACCAGCGGAACCGGAGGCCTGCCTAA
GGCAGCTTACCTCACCCACCATGCCATGATCTCTCACCACCTCACCATCC
ACTACGATGTGCCCTATGAGGTAACTCGCCTGATGTCGCTCCCGATGTTC
CACATGTTTGGCGCATTGTGGACCCACTTATTTCCCATTCGCTATGGCGA
GCCCTTGTTTGTGCTGTCGCGATTTGAAATGACCCAGTTCATTGCGACGG
TGCGCGATTTTGGTATCACCGAGACCTACATGGTCCCCGCCATGATTCAC
AAGTTCAATCGGTCAGCCGCGTCCGCCGCAAGCTCCCTGTCCTCTCTCCG
GTATGTTGGGGTCGCGGGCGCTCCCATTGATGCTGCCGCCATGCAGCGCT
TTCGGGAACTGCTTCATAGTGACGCCCGTGCCTCCCAGCTGTGGGGGATG
ACGGAAGTGGGGGTGGTGTTCCAGAATCGCTATGGTCCCCAGCAGGCACC
TGCCGGCAGCATTGGCCGATTGCTGGCGGGCTACGAGGTGCGGCTGGTCG
GACAGGACCACCAGCTGGTGCTCGAGGACAACCAACCTGGCGAGCTCTGG
GTGCGCGGGCCCGGGGTCCTCAGTGGATACAAGGGCCGGTCAGACGCCAA
AGACGCCCGAGGGTGGTTCCGCACCGGCGATGTTGCGTACGTGAGCGCCG
GGCAGTTCTACATCTACGGGCGCACGAAGGAGCTAATCAAAGTGCGAGGG
TAAGTGATTGTCAGTTGGAAAGCAAACCCCGAAAGCAAGTGCTAACTGTG
ACGTGCAGATGGCAGGTGGCGCCGGCGGAGGTGGAGGCAGCGCTTCTCAA
GCACCCGGAGATAGAGGACGCCGCAGTGATTGGGGTTACATCGCGGGACG
GCAGCACGGAGTTGCCCCGAGCGTTCGTGGTGCGAGCCAAGAGCCTGACG
GGCAGCCGGCTGACCGCGGACGATGTGTACAACTTCACGCGGCGCCAATT
GGCCAGCTACAAGGCGCTGGATGGAGGGGTGATTTTCGTGGAGGAGATCC
CACGGACCGCGAGTGGGAAGATCCAGCGGTTCAAACTCTCCCAGATGAAC
ACCTATCGGGAGATAGTGAGTAACTTGCTGGCACGGTTCAAGGGTGCTAG
TATGCAGACGGTGGGGATAATGCATCCAGGGCGCATTACGGTGTAAAGGG
GGG back to topCoding sequence (CDS) from alignment at ch1:3476108..3478760+ >KJC3_001340-T1 ID=KJC3_001340-T1|Name=KJC3_001340-T1|organism=Aspergillus niger KJC3|type=CDS|length=5490bp|location=Sequence derived from alignment at ch1:3476108..3478760+ (Aspergillus niger KJC3)
ATGGGTAGTCTCTGGGAGTCTCCCACTTTGGGCGATCCCTTCAACCTCAC
CTCCCCCGACAATCAGCTGGACCAGGTCAACAACCACGGCAACAACCATG
GTGCCGGTTTCTACACCGACTTGTTGACCTTCGCCTTTCGGGGCCCAGTC
CACTATGACCGGCAACAGCCAATATTCATCGACGCTGAGGACGCTACGCG
ATTCTTCAACGCGTTGCAGTTCGAGACGCTGGTTCGAGCGCTGATTGCTG
GCCTCAAAGCCCACAACGTACAGCCTGGCGATTGTGTCTTGGTCCACCTG
GGCAATAGTATCATATACCCCGCGCTGTTCTTCAGTATCATCGGCGCTGG
CGGTGTGTTCATGGGCTCCAATGCGCGCAGCCAACCACAAGAACTGGAGC
ATATTCTGCAACTGGCGGAGCCAAAGCTGATCATCACCTCGTCCGATGCA
CTGCCCACGGTGCTGAGCGTGTCAGCCGACCGCGGAATGCATCCCAGCCA
GGTGTGTTTGGTGGACGAAGCTGCAGGGGATTACATCGCCCAATACTTCC
TCGCCGGACCATTGGCCTATGCGACTGCCGGCACCTCCTACCTACTACCG
AGTAGTGGGGGCGGCTCTTTGGTGAACTTCGCCCACCTTCTGGCGTATGG
CGAAAGTGATTGGGTGGCCTTTGATGACGAGAGGATCGCCAAATCGACGC
CGGCCGCCATGTTCTCCACCAGCGGAACCGGAGGCCTGCCTAAGGCAGCT
TACCTCACCCACCATGCCATGATCTCTCACCACCTCACCATCCACTACGA
TGTGCCCTATGAGGTAACTCGCCTGATGTCGCTCCCGATGTTCCACATGT
TTGGCGCATTGTGGACCCACTTATTTCCCATTCGCTATGGCGAGCCCTTG
TTTGTGCTGTCGCGATTTGAAATGACCCAGTTCATTGCGACGGTGCGCGA
TTTTGGTATCACCGAGACCTACATGGTCCCCGCCATGATTCACAAGTTCA
ATCGGTCAGCCGCGTCCGCCGCAAGCTCCCTGTCCTCTCTCCGGTATGTT
GGGGTCGCGGGCGCTCCCATTGATGCTGCCGCCATGCAGCGCTTTCGGGA
ACTGCTTCATAGTGACGCCCGTGCCTCCCAGCTGTGGGGGATGACGGAAG
TGGGGGTGGTGTTCCAGAATCGCTATGGTCCCCAGCAGGCACCTGCCGGC
AGCATTGGCCGATTGCTGGCGGGCTACGAGGTGCGGCTGGTCGGACAGGA
CCACCAGCTGGTGCTCGAGGACAACCAACCTGGCGAGCTCTGGGTGCGCG
GGCCCGGGGTCCTCAGTGGATACAAGGGCCGGTCAGACGCCAAAGACGCC
CGAGGGTGGTTCCGCACCGGCGATGTTGCGTACGTGAGCGCCGGGCAGTT
CTACATCTACGGGCGCACGAAGGAGCTAATCAAAGTGCGAGGATGGCAGG
TGGCGCCGGCGGAGGTGGAGGCAGCGCTTCTCAAGCACCCGGAGATAGAG
GACGCCGCAGTGATTGGGGTTACATCGCGGGACGGCAGCACGGAGTTGCC
CCGAGCGTTCGTGGTGCGAGCCAAGAGCCTGACGGGCAGCCGGCTGACCG
CGGACGATGTGTACAACTTCACGCGGCGCCAATTGGCCAGCTACAAGGCG
CTGGATGGAGGGGTGATTTTCGTGGAGGAGATCCCACGGACCGCGAGTGG
GAAGATCCAGCGGTTCAAACTCTCCCAGATGAACACCTATCGGGAGATAG
TGAGTAACTTGCTGGCACGGTTCAAGGGTGCTAGTATGCAGACGGTGGGG
ATAATGCATCCAGGGCGCATTACGGTGTAAATGGGTAGTCTCTGGGAGTC
TCCCACTTTGGGCGATCCCTTCAACCTCACCTCCCCCGACAATCAGCTGG
ACCAGGTCAACAACCACGGCAACAACCATGGTGCCGGTTTCTACACCGAC
TTGTTGACCTTCGCCTTTCGGGGCCCAGTCCACTATGACCGGCAACAGCC
AATATTCATCGACGCTGAGGACGCTACGCGATTCTTCAACGCGTTGCAGT
TCGAGACGCTGGTTCGAGCGCTGATTGCTGGCCTCAAAGCCCACAACGTA
CAGCCTGGCGATTGTGTCTTGGTCCACCTGGGCAATAGTATCATATACCC
CGCGCTGTTCTTCAGTATCATCGGCGCTGGCGGTGTGTTCATGGGCTCCA
ATGCGCGCAGCCAACCACAAGAACTGGAGCATATTCTGCAACTGGCGGAG
CCAAAGCTGATCATCACCTCGTCCGATGCACTGCCCACGGTGCTGAGCGT
GTCAGCCGACCGCGGAATGCATCCCAGCCAGGTGTGTTTGGTGGACGAAG
CTGCAGGGGATTACATCGCCCAATACTTCCTCGCCGGACCATTGGCCTAT
GCGACTGCCGGCACCTCCTACCTACTACCGAGTAGTGGGGGCGGCTCTTT
GGTGAACTTCGCCCACCTTCTGGCGTATGGCGAAAGTGATTGGGTGGCCT
TTGATGACGAGAGGATCGCCAAATCGACGCCGGCCGCCATGTTCTCCACC
AGCGGAACCGGAGGCCTGCCTAAGGCAGCTTACCTCACCCACCATGCCAT
GATCTCTCACCACCTCACCATCCACTACGATGTGCCCTATGAGGTAACTC
GCCTGATGTCGCTCCCGATGTTCCACATGTTTGGCGCATTGTGGACCCAC
TTATTTCCCATTCGCTATGGCGAGCCCTTGTTTGTGCTGTCGCGATTTGA
AATGACCCAGTTCATTGCGACGGTGCGCGATTTTGGTATCACCGAGACCT
ACATGGTCCCCGCCATGATTCACAAGTTCAATCGGTCAGCCGCGTCCGCC
GCAAGCTCCCTGTCCTCTCTCCGGTATGTTGGGGTCGCGGGCGCTCCCAT
TGATGCTGCCGCCATGCAGCGCTTTCGGGAACTGCTTCATAGTGACGCCC
GTGCCTCCCAGCTGTGGGGGATGACGGAAGTGGGGGTGGTGTTCCAGAAT
CGCTATGGTCCCCAGCAGGCACCTGCCGGCAGCATTGGCCGATTGCTGGC
GGGCTACGAGGTGCGGCTGGTCGGACAGGACCACCAGCTGGTGCTCGAGG
ACAACCAACCTGGCGAGCTCTGGGTGCGCGGGCCCGGGGTCCTCAGTGGA
TACAAGGGCCGGTCAGACGCCAAAGACGCCCGAGGGTGGTTCCGCACCGG
CGATGTTGCGTACGTGAGCGCCGGGCAGTTCTACATCTACGGGCGCACGA
AGGAGCTAATCAAAGTGCGAGGATGGCAGGTGGCGCCGGCGGAGGTGGAG
GCAGCGCTTCTCAAGCACCCGGAGATAGAGGACGCCGCAGTGATTGGGGT
TACATCGCGGGACGGCAGCACGGAGTTGCCCCGAGCGTTCGTGGTGCGAG
CCAAGAGCCTGACGGGCAGCCGGCTGACCGCGGACGATGTGTACAACTTC
ACGCGGCGCCAATTGGCCAGCTACAAGGCGCTGGATGGAGGGGTGATTTT
CGTGGAGGAGATCCCACGGACCGCGAGTGGGAAGATCCAGCGGTTCAAAC
TCTCCCAGATGAACACCTATCGGGAGATAGTGAGTAACTTGCTGGCACGG
TTCAAGGGTGCTAGTATGCAGACGGTGGGGATAATGCATCCAGGGCGCAT
TACGGTGTAAATGGGTAGTCTCTGGGAGTCTCCCACTTTGGGCGATCCCT
TCAACCTCACCTCCCCCGACAATCAGCTGGACCAGGTCAACAACCACGGC
AACAACCATGGTGCCGGTTTCTACACCGACTTGTTGACCTTCGCCTTTCG
GGGCCCAGTCCACTATGACCGGCAACAGCCAATATTCATCGACGCTGAGG
ACGCTACGCGATTCTTCAACGCGTTGCAGTTCGAGACGCTGGTTCGAGCG
CTGATTGCTGGCCTCAAAGCCCACAACGTACAGCCTGGCGATTGTGTCTT
GGTCCACCTGGGCAATAGTATCATATACCCCGCGCTGTTCTTCAGTATCA
TCGGCGCTGGCGGTGTGTTCATGGGCTCCAATGCGCGCAGCCAACCACAA
GAACTGGAGCATATTCTGCAACTGGCGGAGCCAAAGCTGATCATCACCTC
GTCCGATGCACTGCCCACGGTGCTGAGCGTGTCAGCCGACCGCGGAATGC
ATCCCAGCCAGGTGTGTTTGGTGGACGAAGCTGCAGGGGATTACATCGCC
CAATACTTCCTCGCCGGACCATTGGCCTATGCGACTGCCGGCACCTCCTA
CCTACTACCGAGTAGTGGGGGCGGCTCTTTGGTGAACTTCGCCCACCTTC
TGGCGTATGGCGAAAGTGATTGGGTGGCCTTTGATGACGAGAGGATCGCC
AAATCGACGCCGGCCGCCATGTTCTCCACCAGCGGAACCGGAGGCCTGCC
TAAGGCAGCTTACCTCACCCACCATGCCATGATCTCTCACCACCTCACCA
TCCACTACGATGTGCCCTATGAGGTAACTCGCCTGATGTCGCTCCCGATG
TTCCACATGTTTGGCGCATTGTGGACCCACTTATTTCCCATTCGCTATGG
CGAGCCCTTGTTTGTGCTGTCGCGATTTGAAATGACCCAGTTCATTGCGA
CGGTGCGCGATTTTGGTATCACCGAGACCTACATGGTCCCCGCCATGATT
CACAAGTTCAATCGGTCAGCCGCGTCCGCCGCAAGCTCCCTGTCCTCTCT
CCGGTATGTTGGGGTCGCGGGCGCTCCCATTGATGCTGCCGCCATGCAGC
GCTTTCGGGAACTGCTTCATAGTGACGCCCGTGCCTCCCAGCTGTGGGGG
ATGACGGAAGTGGGGGTGGTGTTCCAGAATCGCTATGGTCCCCAGCAGGC
ACCTGCCGGCAGCATTGGCCGATTGCTGGCGGGCTACGAGGTGCGGCTGG
TCGGACAGGACCACCAGCTGGTGCTCGAGGACAACCAACCTGGCGAGCTC
TGGGTGCGCGGGCCCGGGGTCCTCAGTGGATACAAGGGCCGGTCAGACGC
CAAAGACGCCCGAGGGTGGTTCCGCACCGGCGATGTTGCGTACGTGAGCG
CCGGGCAGTTCTACATCTACGGGCGCACGAAGGAGCTAATCAAAGTGCGA
GGATGGCAGGTGGCGCCGGCGGAGGTGGAGGCAGCGCTTCTCAAGCACCC
GGAGATAGAGGACGCCGCAGTGATTGGGGTTACATCGCGGGACGGCAGCA
CGGAGTTGCCCCGAGCGTTCGTGGTGCGAGCCAAGAGCCTGACGGGCAGC
CGGCTGACCGCGGACGATGTGTACAACTTCACGCGGCGCCAATTGGCCAG
CTACAAGGCGCTGGATGGAGGGGTGATTTTCGTGGAGGAGATCCCACGGA
CCGCGAGTGGGAAGATCCAGCGGTTCAAACTCTCCCAGATGAACACCTAT
CGGGAGATAGTGAGTAACTTGCTGGCACGGTTCAAGGGTGCTAGTATGCA
GACGGTGGGGATAATGCATCCAGGGCGCATTACGGTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001340-T1.utr5p1 | KJC3_001340-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001340-T1.utr3p1 | KJC3_001340-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042099 |
| DBxref | InterPro:IPR025110 |
| DBxref | InterPro:IPR000873 |
| DBxref | PFAM:PF13193 |
| DBxref | PFAM:PF00501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3476108..3478760 + |
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