You are here

Home

KJC3_001340-T2, KJC3_001340-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001340-T2
Unique NameKJC3_001340-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3476108..3478760+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001340-T2 ID=KJC3_001340-T2|Name=KJC3_001340-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2653bp|location=Sequence derived from alignment at ch1:3476108..3478760+ (Aspergillus niger KJC3)
CTGAAACTTCCCATCATGAAATGGAGATATATTTATCAGCCCCAGAATTC
CCCTTTGATGGATCGGGGAAATTATTCTTCTTCTTCTTGATCTTTTGTGA
TCATTCCTGTCTACTGCCTTCTACCAAACTCACTAAACTGTCCTCGGTCC
TCCGTGCTACATACTACATACTACTTACTGTTCTCATCCGCTCCCGTCAC
TTTCACACTGGAAACGGGGCATGTGTGATTTGATTCACATTGGACTGGAC
TCAACTGGACTTGATTCAACTCTGGCAACACTAACTGGACGGGACTGAAT
TGACCCTCTTCTTCCCTCTCTGTCTCCTTCTCCTGTCTTTCTCATCGTCA
CCCTCTCTCCTCCTGTTTCCCTTCTCCTTCTCCCTCCCTCCCTCCCTCTC
TCTCTCCAACCCTTCTCCTGTTCCATCTTTGGTTTCCACTCCTATCTTCT
CCTCCTCCACTCTCCATTTCCCGTCAATCATCCCTTCAGTTCTTTGTGAG
CAAATCAACCAGTAAATTCCTCCACGATGGGTAGTCTCTGGGAGTCTCCC
ACTTTGGGCGATCCCTTCAACCTCACCTCCCCCGACAATCAGCTGGACCA
GGTCAACAACCACGGCAACAACCATGGTGCCGGTTTCTACACCGACTTGT
TGACCTTCGCCTTTCGGGGCCCAGTCCACTATGACCGGCAACAGCCAATA
TTCATCGACGCTGAGGACGCTACGCGATTCTTCAACGCGTTGCAGTTCGA
GACGCTGGTTCGAGCGCTGATTGCTGGCCTCAAAGCCCACAACGTACAGC
CTGGCGATTGTGTCTTGGTCCACCTGGGCAATAGTGTAAGTAGTAGTCAT
CTAATCATCTTCCTCCCCTGACTGGCCCGCTTATCAAATCTCCCTCCCCC
CAATACTACTTAACTCAACCTCGACATCTCTGCCCCTCCCCCCACCTCAC
CACCCTCCTGTTCTCTGTTCTCGTCCATTTGATTTGTTACCTGTTTCTCC
ATCATGTTGTCGTCATCCCATCATGCCCCTCCATCATCCTCTTCTCACTG
ACTCATGGCGTGGTAGATCATATACCCCGCGCTGTTCTTCAGTATCATCG
GCGCTGGCGGTGTGTTCATGGGCTCCAATGCGCGCAGCCAACCACAAGAA
CTGGAGCATATTCTGCAACTGGCGGAGCCAAAGCTGATCATCACCTCGTC
CGATGCACTGCCCACGGTGCTGAGCGTGTCAGCCGACCGCGGAATGCATC
CCAGCCAGGTGTGTTTGGTGGACGAAGCTGCAGGGGATTACATCGCCCAA
TACTTCCTCGCCGGACCATTGGCCTATGCGACTGCCGGCACCTCCTACCT
ACTACCGAGTAGTGGGGGCGGCTCTTTGGTGAACTTCGCCCACCTTCTGG
CGTATGGCGAAAGTGATTGGGTGGCCTTTGATGACGAGAGGATCGCCAAA
TCGACGCCGGCCGCCATGTTCTCCACCAGCGGAACCGGAGGCCTGCCTAA
GGCAGCTTACCTCACCCACCATGCCATGATCTCTCACCACCTCACCATCC
ACTACGATGTGCCCTATGAGGTAACTCGCCTGATGTCGCTCCCGATGTTC
CACATGTTTGGCGCATTGTGGACCCACTTATTTCCCATTCGCTATGGCGA
GCCCTTGTTTGTGCTGTCGCGATTTGAAATGACCCAGTTCATTGCGACGG
TGCGCGATTTTGGTATCACCGAGACCTACATGGTCCCCGCCATGATTCAC
AAGTTCAATCGGTCAGCCGCGTCCGCCGCAAGCTCCCTGTCCTCTCTCCG
GTATGTTGGGGTCGCGGGCGCTCCCATTGATGCTGCCGCCATGCAGCGCT
TTCGGGAACTGCTTCATAGTGACGCCCGTGCCTCCCAGCTGTGGGGGATG
ACGGAAGTGGGGGTGGTGTTCCAGAATCGCTATGGTCCCCAGCAGGCACC
TGCCGGCAGCATTGGCCGATTGCTGGCGGGCTACGAGGTGCGGCTGGTCG
GACAGGACCACCAGCTGGTGCTCGAGGACAACCAACCTGGCGAGCTCTGG
GTGCGCGGGCCCGGGGTCCTCAGTGGATACAAGGGCCGGTCAGACGCCAA
AGACGCCCGAGGGTGGTTCCGCACCGGCGATGTTGCGTACGTGAGCGCCG
GGCAGTTCTACATCTACGGGCGCACGAAGGAGCTAATCAAAGTGCGAGGG
TAAGTGATTGTCAGTTGGAAAGCAAACCCCGAAAGCAAGTGCTAACTGTG
ACGTGCAGATGGCAGGTGGCGCCGGCGGAGGTGGAGGCAGCGCTTCTCAA
GCACCCGGAGATAGAGGACGCCGCAGTGATTGGGGTTACATCGCGGGACG
GCAGCACGGAGTTGCCCCGAGCGTTCGTGGTGCGAGCCAAGAGCCTGACG
GGCAGCCGGCTGACCGCGGACGATGTGTACAACTTCACGCGGCGCCAATT
GGCCAGCTACAAGGCGCTGGATGGAGGGGTGATTTTCGTGGAGGAGATCC
CACGGACCGCGAGTGGGAAGATCCAGCGGTTCAAACTCTCCCAGATGAAC
ACCTATCGGGAGATAGTGAGTAACTTGCTGGCACGGTTCAAGGGTGCTAG
TATGCAGACGGTGGGGATAATGCATCCAGGGCGCATTACGGTGTAAAGGG
GGG
back to top

Coding sequence (CDS) from alignment at ch1:3476108..3478760+

>KJC3_001340-T2 ID=KJC3_001340-T2|Name=KJC3_001340-T2|organism=Aspergillus niger KJC3|type=CDS|length=2940bp|location=Sequence derived from alignment at ch1:3476108..3478760+ (Aspergillus niger KJC3)
ATGGGCTCCAATGCGCGCAGCCAACCACAAGAACTGGAGCATATTCTGCA
ACTGGCGGAGCCAAAGCTGATCATCACCTCGTCCGATGCACTGCCCACGG
TGCTGAGCGTGTCAGCCGACCGCGGAATGCATCCCAGCCAGGTGTGTTTG
GTGGACGAAGCTGCAGGGGATTACATCGCCCAATACTTCCTCGCCGGACC
ATTGGCCTATGCGACTGCCGGCACCTCCTACCTACTACCGAGTAGTGGGG
GCGGCTCTTTGGTGAACTTCGCCCACCTTCTGGCGTATGGCGAAAGTGAT
TGGGTGGCCTTTGATGACGAGAGGATCGCCAAATCGACGCCGGCCGCCAT
GTTCTCCACCAGCGGAACCGGAGGCCTGCCTAAGGCAGCTTACCTCACCC
ACCATGCCATGATCTCTCACCACCTCACCATCCACTACGATGTGCCCTAT
GAGGTAACTCGCCTGATGTCGCTCCCGATGTTCCACATGTTTGGCGCATT
GTGGACCCACTTATTTCCCATTCGCTATGGCGAGCCCTTGTTTGTGCTGT
CGCGATTTGAAATGACCCAGTTCATTGCGACGGTGCGCGATTTTGGTATC
ACCGAGACCTACATGGTCCCCGCCATGATTCACAAGTTCAATCGGTCAGC
CGCGTCCGCCGCAAGCTCCCTGTCCTCTCTCCGGTATGTTGGGGTCGCGG
GCGCTCCCATTGATGCTGCCGCCATGCAGCGCTTTCGGGAACTGCTTCAT
AGTGACGCCCGTGCCTCCCAGCTGTGGGGGATGACGGAAGTGGGGGTGGT
GTTCCAGAATCGCTATGGTCCCCAGCAGGCACCTGCCGGCAGCATTGGCC
GATTGCTGGCGGGCTACGAGGTGCGGCTGGTCGGACAGGACCACCAGCTG
GTGCTCGAGGACAACCAACCTGGCGAGCTCTGGGTGCGCGGGCCCGGGGT
CCTCAGTGGATACAAGGGCCGGTCAGACGCCAAAGACGCCCGAGGGTGGT
TCCGCACCGGCGATGTTGCGTACGTGAGCGCCGGGCAGTTCTACATCTAC
GGGCGCACGAAGGAGCTAATCAAAGTGCGAGGATGGCAGGTGGCGCCGGC
GGAGGTGGAGGCAGCGCTTCTCAAGCACCCGGAGATAGAGGACGCCGCAG
TGATTGGGGTTACATCGCGGGACGGCAGCACGGAGTTGCCCCGAGCGTTC
GTGGTGCGAGCCAAGAGCCTGACGGGCAGCCGGCTGACCGCGGACGATGT
GTACAACTTCACGCGGCGCCAATTGGCCAGCTACAAGGCGCTGGATGGAG
GGGTGATTTTCGTGGAGGAGATCCCACGGACCGCGAGTGGGAAGATCCAG
CGGTTCAAACTCTCCCAGATGAACACCTATCGGGAGATAGTGAGTAACTT
GCTGGCACGGTTCAAGGGTGCTAGTATGCAGACGGTGGGGATAATGCATC
CAGGGCGCATTACGGTGTAAATGGGCTCCAATGCGCGCAGCCAACCACAA
GAACTGGAGCATATTCTGCAACTGGCGGAGCCAAAGCTGATCATCACCTC
GTCCGATGCACTGCCCACGGTGCTGAGCGTGTCAGCCGACCGCGGAATGC
ATCCCAGCCAGGTGTGTTTGGTGGACGAAGCTGCAGGGGATTACATCGCC
CAATACTTCCTCGCCGGACCATTGGCCTATGCGACTGCCGGCACCTCCTA
CCTACTACCGAGTAGTGGGGGCGGCTCTTTGGTGAACTTCGCCCACCTTC
TGGCGTATGGCGAAAGTGATTGGGTGGCCTTTGATGACGAGAGGATCGCC
AAATCGACGCCGGCCGCCATGTTCTCCACCAGCGGAACCGGAGGCCTGCC
TAAGGCAGCTTACCTCACCCACCATGCCATGATCTCTCACCACCTCACCA
TCCACTACGATGTGCCCTATGAGGTAACTCGCCTGATGTCGCTCCCGATG
TTCCACATGTTTGGCGCATTGTGGACCCACTTATTTCCCATTCGCTATGG
CGAGCCCTTGTTTGTGCTGTCGCGATTTGAAATGACCCAGTTCATTGCGA
CGGTGCGCGATTTTGGTATCACCGAGACCTACATGGTCCCCGCCATGATT
CACAAGTTCAATCGGTCAGCCGCGTCCGCCGCAAGCTCCCTGTCCTCTCT
CCGGTATGTTGGGGTCGCGGGCGCTCCCATTGATGCTGCCGCCATGCAGC
GCTTTCGGGAACTGCTTCATAGTGACGCCCGTGCCTCCCAGCTGTGGGGG
ATGACGGAAGTGGGGGTGGTGTTCCAGAATCGCTATGGTCCCCAGCAGGC
ACCTGCCGGCAGCATTGGCCGATTGCTGGCGGGCTACGAGGTGCGGCTGG
TCGGACAGGACCACCAGCTGGTGCTCGAGGACAACCAACCTGGCGAGCTC
TGGGTGCGCGGGCCCGGGGTCCTCAGTGGATACAAGGGCCGGTCAGACGC
CAAAGACGCCCGAGGGTGGTTCCGCACCGGCGATGTTGCGTACGTGAGCG
CCGGGCAGTTCTACATCTACGGGCGCACGAAGGAGCTAATCAAAGTGCGA
GGATGGCAGGTGGCGCCGGCGGAGGTGGAGGCAGCGCTTCTCAAGCACCC
GGAGATAGAGGACGCCGCAGTGATTGGGGTTACATCGCGGGACGGCAGCA
CGGAGTTGCCCCGAGCGTTCGTGGTGCGAGCCAAGAGCCTGACGGGCAGC
CGGCTGACCGCGGACGATGTGTACAACTTCACGCGGCGCCAATTGGCCAG
CTACAAGGCGCTGGATGGAGGGGTGATTTTCGTGGAGGAGATCCCACGGA
CCGCGAGTGGGAAGATCCAGCGGTTCAAACTCTCCCAGATGAACACCTAT
CGGGAGATAGTGAGTAACTTGCTGGCACGGTTCAAGGGTGCTAGTATGCA
GACGGTGGGGATAATGCATCCAGGGCGCATTACGGTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001340KJC3_001340Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001340-T2.utr5p1KJC3_001340-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001340-T2.exon1KJC3_001340-T2.exon1Aspergillus niger KJC3exon
KJC3_001340-T2.exon2KJC3_001340-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001340-T2.cdsKJC3_001340-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001340-T2.utr3p1KJC3_001340-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001340-T2KJC3_001340-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR042099
DBxrefInterPro:IPR000873
DBxrefInterPro:IPR025110
DBxrefPFAM:PF13193
DBxrefPFAM:PF00501
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3476108..3478760 +
Powered by Drupal