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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3491558..3492983+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001346-T1 ID=KJC3_001346-T1|Name=KJC3_001346-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1426bp|location=Sequence derived from alignment at ch1:3491558..3492983+ (Aspergillus niger KJC3)
TGATTGACTGCAGTTGATCAGTCATCTTCATGCATCTCACATGGTGGTAT
TTACCCCTCATTTGCTGCACCCTCTCATTAGTTACATAGGTAAGTAGTTG
TTGAACACCAACACAAACAACAACAACCATTCTTCCTCCTCCCCCCTTCT
TTTCTTCATTATCATCTTCAGTCATAGTCACAACGTAAAGATGCCCCCTC
TAATCGTCGACATCCACACTCATGTCTACCCTCCTTCTTATATGCATATG
CTTCGCGCGCGCAAGACAGTCCCCTATGTCCATGACCCAGCCAACAATGC
AACCCCTCGTCTCATCATCCTTTCATCCGACGATGACCCGTCAATTCCCG
TCGATCAGCGTGGTCGCCCCGTGGATTCGTCCTATTCAGACATTAATGTG
AAGCTGGCGTTCATGCGCCGCCACGGAATCAACTGCAGCGTTATCTCGCT
GGCCAATCCTTGGCTGGATTTCCTCGAGCCGGACGAAGCCCAGACATGGG
CTGAGCGCATCAATGATGACCTCGAGGCAACTTGCGCGCGGGTGAATAAC
GATGCAGACGCAAACAAAACAAAGGCACTCCATGAGAAGGAAACGCTGTT
TGCTTTCGGGGCACTTCCGCTCAGCGCCCCGAGCCCCGATATCGTTGTGA
ATGAGATCAGAAGGCTCAAGTCATTGCCCCATCTACGGGGGGTAATCATG
GGAACAACAGGTCTAGGCAAGGGGTTAGACGATAGTAGGCTGGATCCTGT
CTGGGAGGCATTACAAGATACGGAGTCCATGCTGTTCCTACACCCGCACT
ATGGGCTACCGGATGAAGCCTTTGGTGGACCCGAAGCAACGAATCGCTAT
GGCCATGTTCTTCCCCTAGCTCTAGGTTTTCCTCTTGAAACAACCATTGC
GGTAACGAGGATGCTTTTGGCGGGTGTCTTTGATCGCTTCCCGCGGTTGA
AGATCCTCCTGGCCCATTCCGGAGGCACACTTCCCTTCCTCGCTGGTCGG
ATCGAGAGCTGTATCCTTCATGAACGCAAATTCATGGCCAACGGAGGTGA
TGTACCTGGTCCGCAGCGGAGTGTGTGGGATGTTCTGAGCACCAATATTT
ATCTGGACGCCGTGGTGTACGGCACTGCTGGGTTGAAAGCAGCTGTGACT
GCTGCAGGAGGAAGTGATCGCCTCCTCTTTGGTACGTTTGTTCCGGGATG
CTTCTCTGCTACAACATTATTGACATTAGTGTAGGAACCGATCATCCGTT
CTTCCCTCCTTTGGGCAAGGATGACGAAGAATGGCCTAGTGTGACGACCA
ATTACAAAGCAATCCATGAAGCATTTGAATCAGAAGGAGATACTGCTGCA
GGGGTCTTGGGTGGCAACGCGGCTCGCATACTAAATTTGAGATAGACATG
ATTCATATAATAATAGCAATGCCGCA back to topCoding sequence (CDS) from alignment at ch1:3491558..3492983+ >KJC3_001346-T1 ID=KJC3_001346-T1|Name=KJC3_001346-T1|organism=Aspergillus niger KJC3|type=CDS|length=2304bp|location=Sequence derived from alignment at ch1:3491558..3492983+ (Aspergillus niger KJC3)
ATGCCCCCTCTAATCGTCGACATCCACACTCATGTCTACCCTCCTTCTTA
TATGCATATGCTTCGCGCGCGCAAGACAGTCCCCTATGTCCATGACCCAG
CCAACAATGCAACCCCTCGTCTCATCATCCTTTCATCCGACGATGACCCG
TCAATTCCCGTCGATCAGCGTGGTCGCCCCGTGGATTCGTCCTATTCAGA
CATTAATGTGAAGCTGGCGTTCATGCGCCGCCACGGAATCAACTGCAGCG
TTATCTCGCTGGCCAATCCTTGGCTGGATTTCCTCGAGCCGGACGAAGCC
CAGACATGGGCTGAGCGCATCAATGATGACCTCGAGGCAACTTGCGCGCG
GGTGAATAACGATGCAGACGCAAACAAAACAAAGGCACTCCATGAGAAGG
AAACGCTGTTTGCTTTCGGGGCACTTCCGCTCAGCGCCCCGAGCCCCGAT
ATCGTTGTGAATGAGATCAGAAGGCTCAAGTCATTGCCCCATCTACGGGG
GGTAATCATGGGAACAACAGGTCTAGGCAAGGGGTTAGACGATAGTAGGC
TGGATCCTGTCTGGGAGGCATTACAAGATACGGAGTCCATGCTGTTCCTA
CACCCGCACTATGGGCTACCGGATGAAGCCTTTGGTGGACCCGAAGCAAC
GAATCGCTATGGCCATGTTCTTCCCCTAGCTCTAGGTTTTCCTCTTGAAA
CAACCATTGCGGTAACGAGGATGCTTTTGGCGGGTGTCTTTGATCGCTTC
CCGCGGTTGAAGATCCTCCTGGCCCATTCCGGAGGCACACTTCCCTTCCT
CGCTGGTCGGATCGAGAGCTGTATCCTTCATGAACGCAAATTCATGGCCA
ACGGAGGTGATGTACCTGGTCCGCAGCGGAGTGTGTGGGATGTTCTGAGC
ACCAATATTTATCTGGACGCCGTGGTGTACGGCACTGCTGGGTTGAAAGC
AGCTGTGACTGCTGCAGGAGGAAGTGATCGCCTCCTCTTTGGAACCGATC
ATCCGTTCTTCCCTCCTTTGGGCAAGGATGACGAAGAATGGCCTAGTGTG
ACGACCAATTACAAAGCAATCCATGAAGCATTTGAATCAGAAGGAGATAC
TGCTGCAGGGGTCTTGGGTGGCAACGCGGCTCGCATACTAAATTTGAGAT
AGATGCCCCCTCTAATCGTCGACATCCACACTCATGTCTACCCTCCTTCT
TATATGCATATGCTTCGCGCGCGCAAGACAGTCCCCTATGTCCATGACCC
AGCCAACAATGCAACCCCTCGTCTCATCATCCTTTCATCCGACGATGACC
CGTCAATTCCCGTCGATCAGCGTGGTCGCCCCGTGGATTCGTCCTATTCA
GACATTAATGTGAAGCTGGCGTTCATGCGCCGCCACGGAATCAACTGCAG
CGTTATCTCGCTGGCCAATCCTTGGCTGGATTTCCTCGAGCCGGACGAAG
CCCAGACATGGGCTGAGCGCATCAATGATGACCTCGAGGCAACTTGCGCG
CGGGTGAATAACGATGCAGACGCAAACAAAACAAAGGCACTCCATGAGAA
GGAAACGCTGTTTGCTTTCGGGGCACTTCCGCTCAGCGCCCCGAGCCCCG
ATATCGTTGTGAATGAGATCAGAAGGCTCAAGTCATTGCCCCATCTACGG
GGGGTAATCATGGGAACAACAGGTCTAGGCAAGGGGTTAGACGATAGTAG
GCTGGATCCTGTCTGGGAGGCATTACAAGATACGGAGTCCATGCTGTTCC
TACACCCGCACTATGGGCTACCGGATGAAGCCTTTGGTGGACCCGAAGCA
ACGAATCGCTATGGCCATGTTCTTCCCCTAGCTCTAGGTTTTCCTCTTGA
AACAACCATTGCGGTAACGAGGATGCTTTTGGCGGGTGTCTTTGATCGCT
TCCCGCGGTTGAAGATCCTCCTGGCCCATTCCGGAGGCACACTTCCCTTC
CTCGCTGGTCGGATCGAGAGCTGTATCCTTCATGAACGCAAATTCATGGC
CAACGGAGGTGATGTACCTGGTCCGCAGCGGAGTGTGTGGGATGTTCTGA
GCACCAATATTTATCTGGACGCCGTGGTGTACGGCACTGCTGGGTTGAAA
GCAGCTGTGACTGCTGCAGGAGGAAGTGATCGCCTCCTCTTTGGAACCGA
TCATCCGTTCTTCCCTCCTTTGGGCAAGGATGACGAAGAATGGCCTAGTG
TGACGACCAATTACAAAGCAATCCATGAAGCATTTGAATCAGAAGGAGAT
ACTGCTGCAGGGGTCTTGGGTGGCAACGCGGCTCGCATACTAAATTTGAG
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001346-T1.utr5p1 | KJC3_001346-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001346-T1.utr3p1 | KJC3_001346-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032466 |
| DBxref | InterPro:IPR006680 |
| DBxref | PFAM:PF04909 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3491558..3492983 + |
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