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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3493166..3494931- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001347-T1 ID=KJC3_001347-T1|Name=KJC3_001347-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1766bp|location=Sequence derived from alignment at ch1:3493166..3494931- (Aspergillus niger KJC3)
GCAATGAACTTCGACTCAACAATCTGATGCATCATGACACCGCCTCGTCT
CTTATCGTTTGTCGAACTTCTGGGAAACTAAGGATGGATGGAACTTCAAT
GCCTTCCCCAGCTCAGATAGCACTTGCAATGGCTATCGTCAAGCTTAAGC
CACTGGATGTGGATCTCAAAGGCAATAATCCCGTCTGCTTTCTATGACGG
ACATGCAGATTAATTGAAAGTCTAGAGCATTTATTGCAGATTCGTCATCA
CATCAGAAGCACCCACTCAAGTGACAGGTCCTACACGCATGACAAATTCT
TCGACAGCGTCTCATTCTGGCAACAAGCGTACGAGCGGTCCGAAGCAGAA
CAAAGCAAATTGCTGGATCGAATATACGAGTTAGAGCAACGCAATGAGTC
TCTTCATGCACGGCTTCAGGGTGGAGATATCGCAGGTGCAGAAAACGATC
AAGGGACATTGAAACGCAAGGCTACTGCGAAGGCTGCTGCTTCCGGCAGT
GGTGCCACAACAAGGAAGAGAGCGAAGACCCAGACATTCTCTCGAACGGA
TGCCTCGGTGCTTAACAGTAGTCATTCTGCAGGACTTGGTGGCGGTGTGG
CCGATCCACCAGGCCTTTCTGAGCAATGTCTGTTCGCCGGCCACTTCAGT
GAAGGAGACTATACTGACCTAATTCCCGTTCTAGTCACTGCACCTTTCAT
GAGGCAACTCTTCGCATTACAGAAAGTTCTGCAGAAGCGACCAAATAGTT
CAAGCATTGTTAGTGCCGCAGTGGAGCTTTGCGCTACTGCAACCAAGAAT
GTTCTTGATGCTATTGAACAGCCAGCTGTATCCCGGTCTACGAAGAAAAC
AATACCACAGCCCAAGAGGCCGGATATACTAGCTGTTTTGAACAGCACTG
AGAGCGCCTTTCGAATCCTAATCCAGACTTTTAAGAAACTTTCTGCATCT
GGCCAGCAGATGCGAGATGCTGGACAAGTTACGTACCATATAGTTCGCTT
ATATGAGGTTATCATTGAAGCTTTGAGCCGGCATTGCAGGATCAGAACCG
AACAAAAACTTCGCGAGTCTCAGATAAGCATAAAACCTTCTCGGCAAAGA
CAAAAGGCAGAAGCCAAGCGGCCCAAAACAGGTCACGCTGACAATGCTCA
GAGTTACGGAGGTGAAAGAGATGAGATAGCCACTCAAATGAGCCTGTTGC
TGGGTAGAATGGCGCTCTCGCTCGAAATAGACTGTGTAGCTAAACAGAAT
GTTCTTGAAGGGTTTGTATTCGTACTTCTTAGTCGCGTGGGGAAACTAGT
CTCCTTATTTGTCTTCCACGATTTGCGTTCGCAACCTGATCTACAGATGG
ATGACGCCAAGTTTCCTTTGCCAAGGGGACTTGATGGAATTGGCATGGAT
GAAAGCACATTGCCCGCAGCGGCCATGGAGGCTAAGAGCCTTATATGGCC
ATTAGAGAGGATTTTACTCCTACTCGAAGATGCGCCGTCTATGTCTTCAG
AACCCAGTCACGCGTGTACAAACAAACAGTTGGCTGCAAAGCTCAAGCAA
AAACTACAGACTACCCTGCTTCACTCAGTCTTTGGCGCTGACTCACTTTG
GCAAGATACTTTACAAAACCCCGTCCAACCAGATGAACGGGACCTTGAAC
GACTTCGGACTTATTCACAGGTCCCCGAGCAATCCGTACCCGACTGGTTT
GTACAAGAGGTTTGGAGGCTCATAGGCTGGAAGATGCTAGCTGCGAGCAA
TAGCCCGAGAGCGTAG back to topCoding sequence (CDS) from alignment at ch1:3493166..3494931- >KJC3_001347-T1 ID=KJC3_001347-T1|Name=KJC3_001347-T1|organism=Aspergillus niger KJC3|type=CDS|length=4887bp|location=Sequence derived from alignment at ch1:3493166..3494931- (Aspergillus niger KJC3)
TCACTGCACCTTTCATGAGGCAACTCTTCGCATTACAGAAAGTTCTGCAG
AAGCGACCAAATAGTTCAAGCATTGTTAGTGCCGCAGTGGAGCTTTGCGC
TACTGCAACCAAGAATGTTCTTGATGCTATTGAACAGCCAGCTGTATCCC
GGTCTACGAAGAAAACAATACCACAGCCCAAGAGGCCGGATATACTAGCT
GTTTTGAACAGCACTGAGAGCGCCTTTCGAATCCTAATCCAGACTTTTAA
GAAACTTTCTGCATCTGGCCAGCAGATGCGAGATGCTGGACAAGTTACGT
ACCATATAGTTCGCTTATATGAGGTTATCATTGAAGCTTTGAGCCGGCAT
TGCAGGATCAGAACCGAACAAAAACTTCGCGAGTCTCAGATAAGCATAAA
ACCTTCTCGGCAAAGACAAAAGGCAGAAGCCAAGCGGCCCAAAACAGGTC
ACGCTGACAATGCTCAGAGTTACGGAGGTGAAAGAGATGAGATAGCCACT
CAAATGAGCCTGTTGCTGGGTAGAATGGCGCTCTCGCTCGAAATAGACTG
TGTAGCTAAACAGAATGTTCTTGAAGGGTTTGTATTCGTACTTCTTAGTC
GCGTGGGGAAACTAGTCTCCTTATTTGTCTTCCACGATTTGCGTTCGCAA
CCTGATCTACAGATGGATGACGCCAAGTTTCCTTTGCCAAGGGGACTTGA
TGGAATTGGCATGGATGAAAGCACATTGCCCGCAGCGGCCATGGAGGCTA
AGAGCCTTATATGGCCATTAGAGAGGATTTTACTCCTACTCGAAGATGCG
CCGTCTATGTCTTCAGAACCCAGTCACGCGTGTACAAACAAACAGTTGGC
TGCAAAGCTCAAGCAAAAACTACAGACTACCCTGCTTCACTCAGTCTTTG
GCGCTGACTCACTTTGGCAAGATACTTTACAAAACCCCGTCCAACCAGAT
GAACGGGACCTTGAACGACTTCGGACTTATTCACAGGTCCCCGAGCAATC
CGTACCCGACTGGTTTGTACAAGAGGTTTGGAGGCTCATAGGCTGGAAGA
TGCTAGCTGCGAGCAATAGCCCGAGAGCGTAGAGCATTTATTGCAGATTC
GTCATCACATCAGAAGCACCCACTCAAGTGACAGGTCCTACACGCATGAC
AAATTCTTCGACAGCGTCTCATTCTGGCAACAAGCGTACGAGCGGTCCGA
AGCAGAACAAAGCAAATTGCTGGATCGAATATACGAGTTAGAGCAACGCA
ATGAGTCTCTTCATGCACGGCTTCAGGGTGGAGATATCGCAGGTGCAGAA
AACGATCAAGGGACATTGAAACGCAAGGCTACTGCGAAGGCTGCTGCTTC
CGGCAGTGGTGCCACAACAAGGAAGAGAGCGAAGACCCAGACATTCTCTC
GAACGGATGCCTCGGTGCTTAACAGTAGTCATTCTGCAGGACTTGGTGGC
GGTGTGGCCGATCCACCAGGCCTTTCTGAGCAATATGCATCATGACACCG
CCTCGTCTCTTATCGTTTGTCGAACTTCTGGGAAACTAAGGATGGATGGA
ACTTCAATGCCTTCCCCAGCTCAGATAGCACTTGCAATGGCTATCGTCAA
GCTTAAGCCACTGGATGTGGATCTCAAAGTCACTGCACCTTTCATGAGGC
AACTCTTCGCATTACAGAAAGTTCTGCAGAAGCGACCAAATAGTTCAAGC
ATTGTTAGTGCCGCAGTGGAGCTTTGCGCTACTGCAACCAAGAATGTTCT
TGATGCTATTGAACAGCCAGCTGTATCCCGGTCTACGAAGAAAACAATAC
CACAGCCCAAGAGGCCGGATATACTAGCTGTTTTGAACAGCACTGAGAGC
GCCTTTCGAATCCTAATCCAGACTTTTAAGAAACTTTCTGCATCTGGCCA
GCAGATGCGAGATGCTGGACAAGTTACGTACCATATAGTTCGCTTATATG
AGGTTATCATTGAAGCTTTGAGCCGGCATTGCAGGATCAGAACCGAACAA
AAACTTCGCGAGTCTCAGATAAGCATAAAACCTTCTCGGCAAAGACAAAA
GGCAGAAGCCAAGCGGCCCAAAACAGGTCACGCTGACAATGCTCAGAGTT
ACGGAGGTGAAAGAGATGAGATAGCCACTCAAATGAGCCTGTTGCTGGGT
AGAATGGCGCTCTCGCTCGAAATAGACTGTGTAGCTAAACAGAATGTTCT
TGAAGGGTTTGTATTCGTACTTCTTAGTCGCGTGGGGAAACTAGTCTCCT
TATTTGTCTTCCACGATTTGCGTTCGCAACCTGATCTACAGATGGATGAC
GCCAAGTTTCCTTTGCCAAGGGGACTTGATGGAATTGGCATGGATGAAAG
CACATTGCCCGCAGCGGCCATGGAGGCTAAGAGCCTTATATGGCCATTAG
AGAGGATTTTACTCCTACTCGAAGATGCGCCGTCTATGTCTTCAGAACCC
AGTCACGCGTGTACAAACAAACAGTTGGCTGCAAAGCTCAAGCAAAAACT
ACAGACTACCCTGCTTCACTCAGTCTTTGGCGCTGACTCACTTTGGCAAG
ATACTTTACAAAACCCCGTCCAACCAGATGAACGGGACCTTGAACGACTT
CGGACTTATTCACAGGTCCCCGAGCAATCCGTACCCGACTGGTTTGTACA
AGAGGTTTGGAGGCTCATAGGCTGGAAGATGCTAGCTGCGAGCAATAGCC
CGAGAGCGTAGAGCATTTATTGCAGATTCGTCATCACATCAGAAGCACCC
ACTCAAGTGACAGGTCCTACACGCATGACAAATTCTTCGACAGCGTCTCA
TTCTGGCAACAAGCGTACGAGCGGTCCGAAGCAGAACAAAGCAAATTGCT
GGATCGAATATACGAGTTAGAGCAACGCAATGAGTCTCTTCATGCACGGC
TTCAGGGTGGAGATATCGCAGGTGCAGAAAACGATCAAGGGACATTGAAA
CGCAAGGCTACTGCGAAGGCTGCTGCTTCCGGCAGTGGTGCCACAACAAG
GAAGAGAGCGAAGACCCAGACATTCTCTCGAACGGATGCCTCGGTGCTTA
ACAGTAGTCATTCTGCAGGACTTGGTGGCGGTGTGGCCGATCCACCAGGC
CTTTCTGAGCAATATGCATCATGACACCGCCTCGTCTCTTATCGTTTGTC
GAACTTCTGGGAAACTAAGGATGGATGGAACTTCAATGCCTTCCCCAGCT
CAGATAGCACTTGCAATGGCTATCGTCAAGCTTAAGCCACTGGATGTGGA
TCTCAAAGTCACTGCACCTTTCATGAGGCAACTCTTCGCATTACAGAAAG
TTCTGCAGAAGCGACCAAATAGTTCAAGCATTGTTAGTGCCGCAGTGGAG
CTTTGCGCTACTGCAACCAAGAATGTTCTTGATGCTATTGAACAGCCAGC
TGTATCCCGGTCTACGAAGAAAACAATACCACAGCCCAAGAGGCCGGATA
TACTAGCTGTTTTGAACAGCACTGAGAGCGCCTTTCGAATCCTAATCCAG
ACTTTTAAGAAACTTTCTGCATCTGGCCAGCAGATGCGAGATGCTGGACA
AGTTACGTACCATATAGTTCGCTTATATGAGGTTATCATTGAAGCTTTGA
GCCGGCATTGCAGGATCAGAACCGAACAAAAACTTCGCGAGTCTCAGATA
AGCATAAAACCTTCTCGGCAAAGACAAAAGGCAGAAGCCAAGCGGCCCAA
AACAGGTCACGCTGACAATGCTCAGAGTTACGGAGGTGAAAGAGATGAGA
TAGCCACTCAAATGAGCCTGTTGCTGGGTAGAATGGCGCTCTCGCTCGAA
ATAGACTGTGTAGCTAAACAGAATGTTCTTGAAGGGTTTGTATTCGTACT
TCTTAGTCGCGTGGGGAAACTAGTCTCCTTATTTGTCTTCCACGATTTGC
GTTCGCAACCTGATCTACAGATGGATGACGCCAAGTTTCCTTTGCCAAGG
GGACTTGATGGAATTGGCATGGATGAAAGCACATTGCCCGCAGCGGCCAT
GGAGGCTAAGAGCCTTATATGGCCATTAGAGAGGATTTTACTCCTACTCG
AAGATGCGCCGTCTATGTCTTCAGAACCCAGTCACGCGTGTACAAACAAA
CAGTTGGCTGCAAAGCTCAAGCAAAAACTACAGACTACCCTGCTTCACTC
AGTCTTTGGCGCTGACTCACTTTGGCAAGATACTTTACAAAACCCCGTCC
AACCAGATGAACGGGACCTTGAACGACTTCGGACTTATTCACAGGTCCCC
GAGCAATCCGTACCCGACTGGTTTGTACAAGAGGTTTGGAGGCTCATAGG
CTGGAAGATGCTAGCTGCGAGCAATAGCCCGAGAGCGTAGAGCATTTATT
GCAGATTCGTCATCACATCAGAAGCACCCACTCAAGTGACAGGTCCTACA
CGCATGACAAATTCTTCGACAGCGTCTCATTCTGGCAACAAGCGTACGAG
CGGTCCGAAGCAGAACAAAGCAAATTGCTGGATCGAATATACGAGTTAGA
GCAACGCAATGAGTCTCTTCATGCACGGCTTCAGGGTGGAGATATCGCAG
GTGCAGAAAACGATCAAGGGACATTGAAACGCAAGGCTACTGCGAAGGCT
GCTGCTTCCGGCAGTGGTGCCACAACAAGGAAGAGAGCGAAGACCCAGAC
ATTCTCTCGAACGGATGCCTCGGTGCTTAACAGTAGTCATTCTGCAGGAC
TTGGTGGCGGTGTGGCCGATCCACCAGGCCTTTCTGAGCAATATGCATCA
TGACACCGCCTCGTCTCTTATCGTTTGTCGAACTTCTGGGAAACTAAGGA
TGGATGGAACTTCAATGCCTTCCCCAGCTCAGATAGCACTTGCAATGGCT
ATCGTCAAGCTTAAGCCACTGGATGTGGATCTCAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001347-T1.utr5p1 | KJC3_001347-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3493166..3494931 - |
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