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KJC3_001348-T1, KJC3_001348-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001348-T1
Unique NameKJC3_001348-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3495439..3497106+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001348-T1 ID=KJC3_001348-T1|Name=KJC3_001348-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1668bp|location=Sequence derived from alignment at ch1:3495439..3497106+ (Aspergillus niger KJC3)
CCTCTTTCATCTCTCCAACACAAGACCTTCGAGTGGCGTGCATCGCCGGT
GAAAACACCACCTTAACTCAGTTTTACAAATAACAAAGCTATAATCTACG
CCTGAACTTAGACACAACAACGCGGCGGCCAAACGCGCAGCACCATGGCC
TCAAAAGACGACCTCAAGGCCCACGCGGCCTCCAACGAAGACTTCTACGC
CCTCCTCGACATTTCCCCCGCAGCTGCAGAATCAGAAATCCGTCGCGCCT
ACCGCCGAACTGCACTGAAATATCACCCCGACAAAATCGCGAACCCCACA
CCTGCAGACATCGACAAGTTCCATCTGCTCCAGATCGCCTACGATGTTCT
CTCCGATCCGTCGGTGCGGCAGCTCTACGATAATGCGCGTGAAGCGCGCC
AGCGCAAGCAGCGCGAGCGGGATATGATGGATGCCGCGAAGAGGAAGATG
AGGGAGGACTTGGAGGCTAGGGAGCGCGCGGGGGCTGCGGCGATGGGTGG
CGCTGGTGCGCAACGCGGTGTGAAGCGGCCGTGGATGGGGAGCGGCGCTG
ATGATGATGCTGAAGCTAAGTTGCAGAGAGAGATCGAGCGGATTGCGGAG
GATGGACGAAGGCGACGACGCGAGGCGGAGGAACGGCTGAAGCATGAAAT
GGAGGAGGAAGAGAAGTTGATGCGCCAGGAGGAGGAAGAGGCACAACGGG
CGGCGGACAGGAGTAGTCAGAAGGTTGATCGCTCGAAAGAAGGCGGTACA
AATGTTCCGGAGTTAGAACGAGGTGTCAAGGTGCGCTGGGTACGTGAAGG
ACGCGGGCTGGACCTGGATAAAGATCGGTTGATCTCTCTGTTCTCGTCTT
ACGGCAAGATCGAAAATATCCTGCTCCTTAAAGACAAACGACAACGTCTC
GGGGATAATCGCGAGAAAAAGACGGTTGCGACAGGTGTCGTGATATTCGC
TTCCATTGTCAGTGCCCACGCTGCTGTTCTGGATAGTGAGAAGAAGGTGC
GTCAGAGTATTGGGCAAGCGGATAGCGACTGGTCTGCCGTCGAATCCGTC
TTCTGGGCATCTGGCAGTCAACCTGACCTGAGCGTTGAATCCAACGGCTA
TTCTACAGCCTCCACTCCCTCCGAACAGGGCACCGCAGCACCCAACTCGT
CCGGGCCAGTTCCTTCAGCTGCTCCTCCCAAACCGTCTTTCAACTTTGCT
GGGTTGAAGTCAGCAGCGTCTGATGCCCCCAGCAAGAATCCCGGAAAGGC
ACCATCTTTCGGTTCCTTTGCTGCTGGCGCGGCAGCAAAGTCGGCGAAAC
CTGCGCCTGCTGGCTCGACCAATGGCTCGAGCGCTCCGAGCATGGCGGAG
TTGACGTTGATGCGGCTGAGAAATGCGCAGCGTGAGAAGGAACGCAAGGC
CCTTGAAGAGCAGCTTCGGAAAGAAGATGAAGCTGCAGATGCAGCTGAGG
CCGAAACTAAAGTATAGATGCGATATTCCCTTAATGACTCGAGGCCATGG
TGAGCATTTACAAAGGCGTTATGGTCGGATGAGCTCGAACAGCAGCATCA
AGTGCTGCGCTTTGTATTCTTAGACCCTTCATTCCAAGTATAGAGATACC
CTCACGTTTTGTACTATCAACTACTTGCATTTTCGCTAAATGAGACATGG
AGACATGGTATTTACCGG
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Coding sequence (CDS) from alignment at ch1:3495439..3497106+

>KJC3_001348-T1 ID=KJC3_001348-T1|Name=KJC3_001348-T1|organism=Aspergillus niger KJC3|type=CDS|length=1323bp|location=Sequence derived from alignment at ch1:3495439..3497106+ (Aspergillus niger KJC3)
ATGGCCTCAAAAGACGACCTCAAGGCCCACGCGGCCTCCAACGAAGACTT
CTACGCCCTCCTCGACATTTCCCCCGCAGCTGCAGAATCAGAAATCCGTC
GCGCCTACCGCCGAACTGCACTGAAATATCACCCCGACAAAATCGCGAAC
CCCACACCTGCAGACATCGACAAGTTCCATCTGCTCCAGATCGCCTACGA
TGTTCTCTCCGATCCGTCGGTGCGGCAGCTCTACGATAATGCGCGTGAAG
CGCGCCAGCGCAAGCAGCGCGAGCGGGATATGATGGATGCCGCGAAGAGG
AAGATGAGGGAGGACTTGGAGGCTAGGGAGCGCGCGGGGGCTGCGGCGAT
GGGTGGCGCTGGTGCGCAACGCGGTGTGAAGCGGCCGTGGATGGGGAGCG
GCGCTGATGATGATGCTGAAGCTAAGTTGCAGAGAGAGATCGAGCGGATT
GCGGAGGATGGACGAAGGCGACGACGCGAGGCGGAGGAACGGCTGAAGCA
TGAAATGGAGGAGGAAGAGAAGTTGATGCGCCAGGAGGAGGAAGAGGCAC
AACGGGCGGCGGACAGGAGTAGTCAGAAGGTTGATCGCTCGAAAGAAGGC
GGTACAAATGTTCCGGAGTTAGAACGAGGTGTCAAGGTGCGCTGGGTACG
TGAAGGACGCGGGCTGGACCTGGATAAAGATCGGTTGATCTCTCTGTTCT
CGTCTTACGGCAAGATCGAAAATATCCTGCTCCTTAAAGACAAACGACAA
CGTCTCGGGGATAATCGCGAGAAAAAGACGGTTGCGACAGGTGTCGTGAT
ATTCGCTTCCATTGTCAGTGCCCACGCTGCTGTTCTGGATAGTGAGAAGA
AGGTGCGTCAGAGTATTGGGCAAGCGGATAGCGACTGGTCTGCCGTCGAA
TCCGTCTTCTGGGCATCTGGCAGTCAACCTGACCTGAGCGTTGAATCCAA
CGGCTATTCTACAGCCTCCACTCCCTCCGAACAGGGCACCGCAGCACCCA
ACTCGTCCGGGCCAGTTCCTTCAGCTGCTCCTCCCAAACCGTCTTTCAAC
TTTGCTGGGTTGAAGTCAGCAGCGTCTGATGCCCCCAGCAAGAATCCCGG
AAAGGCACCATCTTTCGGTTCCTTTGCTGCTGGCGCGGCAGCAAAGTCGG
CGAAACCTGCGCCTGCTGGCTCGACCAATGGCTCGAGCGCTCCGAGCATG
GCGGAGTTGACGTTGATGCGGCTGAGAAATGCGCAGCGTGAGAAGGAACG
CAAGGCCCTTGAAGAGCAGCTTCGGAAAGAAGATGAAGCTGCAGATGCAG
CTGAGGCCGAAACTAAAGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001348KJC3_001348Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001348-T1.utr5p1KJC3_001348-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001348-T1.exon1KJC3_001348-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001348-T1.cdsKJC3_001348-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001348-T1.utr3p1KJC3_001348-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001348-T1KJC3_001348-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3495439..3497106 +
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