You are here

Home

KJC3_001351-T1, KJC3_001351-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001351-T1
Unique NameKJC3_001351-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3502310..3503231+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001351-T1 ID=KJC3_001351-T1|Name=KJC3_001351-T1|organism=Aspergillus niger KJC3|type=mRNA|length=922bp|location=Sequence derived from alignment at ch1:3502310..3503231+ (Aspergillus niger KJC3)
ATGTCGGCGCAACTGGCAAATCTAGTGGGCAAGAAGATTCTCGCAGAATC
CGCCCGAAATCATTTCGGACAAGAGGTAAAGCCCATTCCATTTTCTGAAC
CATCCTACTCTAGCGAACTATGGGCTAAGACTGTGTGTGTTGCTGTAGGA
CCCATATTTCGAAGAGGTTCCTGCATCACGCCTGAATCGCGCGTTCGGGA
AGAAGACACAAAAGCGACGCAAAGCAGTACCTCCCGGTCTATCGCAGAAC
GACAGCAAGGTCTTGACGCAAGTAAAAAGAAGAGCGTATCGCTTGGACTT
ATGTCTCTTTAGCTTGTGTGGAATCCGATTCGGATGGGGGAGTGTGATAG
GTCTATTCCCATTGTAAGTTGCAATCCCTGCACATGGTATGCAATCCAAG
ACTCATGCAAGGATTCAAAATAGTATTGGCGATGGAGCAGATGCTGCATT
GGCTTTAATGGTGGTGCACACCTGTGACAAAATCGACGGGGGCCTCCCAT
CGCGGCTGCGAATGATGATGCTCATGAATATCGTGATTGATTTCTTCATC
GGCCTGGTTCCTTTCATAGGTGATGTTGCCGATGCCGTGTACAAGTGCAA
CACGCGGAACGCCGTGCTCCTGGAAAAGCATCTGCGGGAAAAGGGGGCCA
AGGCGCTTTCCAAACAAGAGCGGAGGCAGAATACAGCGGATATGAGCTTG
CCGGACGAGTTCGACCGCTATGACGACGATACCTCGGGTGAGCCATCTAG
TCATAAAGGCCAACCACACAGTAGGAACACTGATGGTCCAGCGAAGCCTC
AAGCAGCACGGCATCCCAAGAAAAGCCGTTCAAAAGGCAGATGGTTCGGA
GGAAGAGCCCAACCGGAGGATGACCTTGAGAGTGGAGTGATCGATAACTC
CCGGCCCTCTCGGCGGCCATGA
back to top

Coding sequence (CDS) from alignment at ch1:3502310..3503231+

>KJC3_001351-T1 ID=KJC3_001351-T1|Name=KJC3_001351-T1|organism=Aspergillus niger KJC3|type=CDS|length=2367bp|location=Sequence derived from alignment at ch1:3502310..3503231+ (Aspergillus niger KJC3)
ATGTCGGCGCAACTGGCAAATCTAGTGGGCAAGAAGATTCTCGCAGAATC
CGCCCGAAATCATTTCGGACAAGAGGACCCATATTTCGAAGAGGTTCCTG
CATCACGCCTGAATCGCGCGTTCGGGAAGAAGACACAAAAGCGACGCAAA
GCAGTACCTCCCGGTCTATCGCAGAACGACAGCAAGGTCTTGACGCAAGT
AAAAAGAAGAGCGTATCGCTTGGACTTATGTCTCTTTAGCTTGTGTGGAA
TCCGATTCGGATGGGGGAGTGTGATAGGTCTATTCCCATTTATTGGCGAT
GGAGCAGATGCTGCATTGGCTTTAATGGTGGTGCACACCTGTGACAAAAT
CGACGGGGGCCTCCCATCGCGGCTGCGAATGATGATGCTCATGAATATCG
TGATTGATTTCTTCATCGGCCTGGTTCCTTTCATAGGTGATGTTGCCGAT
GCCGTGTACAAGTGCAACACGCGGAACGCCGTGCTCCTGGAAAAGCATCT
GCGGGAAAAGGGGGCCAAGGCGCTTTCCAAACAAGAGCGGAGGCAGAATA
CAGCGGATATGAGCTTGCCGGACGAGTTCGACCGCTATGACGACGATACC
TCGGGTGAGCCATCTAGTCATAAAGGCCAACCACACAGTAGGAACACTGA
TGGTCCAGCGAAGCCTCAAGCAGCACGGCATCCCAAGAAAAGCCGTTCAA
AAGGCAGATGGTTCGGAGGAAGAGCCCAACCGGAGGATGACCTTGAGAGT
GGAGTGATCGATAACTCCCGGCCCTCTCGGCGGCCATGAATGTCGGCGCA
ACTGGCAAATCTAGTGGGCAAGAAGATTCTCGCAGAATCCGCCCGAAATC
ATTTCGGACAAGAGGACCCATATTTCGAAGAGGTTCCTGCATCACGCCTG
AATCGCGCGTTCGGGAAGAAGACACAAAAGCGACGCAAAGCAGTACCTCC
CGGTCTATCGCAGAACGACAGCAAGGTCTTGACGCAAGTAAAAAGAAGAG
CGTATCGCTTGGACTTATGTCTCTTTAGCTTGTGTGGAATCCGATTCGGA
TGGGGGAGTGTGATAGGTCTATTCCCATTTATTGGCGATGGAGCAGATGC
TGCATTGGCTTTAATGGTGGTGCACACCTGTGACAAAATCGACGGGGGCC
TCCCATCGCGGCTGCGAATGATGATGCTCATGAATATCGTGATTGATTTC
TTCATCGGCCTGGTTCCTTTCATAGGTGATGTTGCCGATGCCGTGTACAA
GTGCAACACGCGGAACGCCGTGCTCCTGGAAAAGCATCTGCGGGAAAAGG
GGGCCAAGGCGCTTTCCAAACAAGAGCGGAGGCAGAATACAGCGGATATG
AGCTTGCCGGACGAGTTCGACCGCTATGACGACGATACCTCGGGTGAGCC
ATCTAGTCATAAAGGCCAACCACACAGTAGGAACACTGATGGTCCAGCGA
AGCCTCAAGCAGCACGGCATCCCAAGAAAAGCCGTTCAAAAGGCAGATGG
TTCGGAGGAAGAGCCCAACCGGAGGATGACCTTGAGAGTGGAGTGATCGA
TAACTCCCGGCCCTCTCGGCGGCCATGAATGTCGGCGCAACTGGCAAATC
TAGTGGGCAAGAAGATTCTCGCAGAATCCGCCCGAAATCATTTCGGACAA
GAGGACCCATATTTCGAAGAGGTTCCTGCATCACGCCTGAATCGCGCGTT
CGGGAAGAAGACACAAAAGCGACGCAAAGCAGTACCTCCCGGTCTATCGC
AGAACGACAGCAAGGTCTTGACGCAAGTAAAAAGAAGAGCGTATCGCTTG
GACTTATGTCTCTTTAGCTTGTGTGGAATCCGATTCGGATGGGGGAGTGT
GATAGGTCTATTCCCATTTATTGGCGATGGAGCAGATGCTGCATTGGCTT
TAATGGTGGTGCACACCTGTGACAAAATCGACGGGGGCCTCCCATCGCGG
CTGCGAATGATGATGCTCATGAATATCGTGATTGATTTCTTCATCGGCCT
GGTTCCTTTCATAGGTGATGTTGCCGATGCCGTGTACAAGTGCAACACGC
GGAACGCCGTGCTCCTGGAAAAGCATCTGCGGGAAAAGGGGGCCAAGGCG
CTTTCCAAACAAGAGCGGAGGCAGAATACAGCGGATATGAGCTTGCCGGA
CGAGTTCGACCGCTATGACGACGATACCTCGGGTGAGCCATCTAGTCATA
AAGGCCAACCACACAGTAGGAACACTGATGGTCCAGCGAAGCCTCAAGCA
GCACGGCATCCCAAGAAAAGCCGTTCAAAAGGCAGATGGTTCGGAGGAAG
AGCCCAACCGGAGGATGACCTTGAGAGTGGAGTGATCGATAACTCCCGGC
CCTCTCGGCGGCCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001351KJC3_001351Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001351-T1.exon1KJC3_001351-T1.exon1Aspergillus niger KJC3exon
KJC3_001351-T1.exon2KJC3_001351-T1.exon2Aspergillus niger KJC3exon
KJC3_001351-T1.exon3KJC3_001351-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001351-T1.cdsKJC3_001351-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001351-T1KJC3_001351-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR025187
DBxrefPFAM:PF13430
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3502310..3503231 +
Powered by Drupal