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KJC3_001355-T1, KJC3_001355-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001355-T1
Unique NameKJC3_001355-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3509873..3511281-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001355-T1 ID=KJC3_001355-T1|Name=KJC3_001355-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1409bp|location=Sequence derived from alignment at ch1:3509873..3511281- (Aspergillus niger KJC3)
CTACTCGGGTCACTTTGGGTGGAAATCCTTGCAGGTCGAGGAATCTCGGA
GAAAATAGCCGGGTAAAATCAAACGGATCTGTCTGGCTTGTAAGCTTTAA
GGTCGTGGACATCCTGAGAACTTGCATCCTGTTCCCCGCAGTCGCACTTT
ATCATTATCTGTTCTAGTCAAGTCAAGAAGTATGGCTGAAGGTCAACCGC
AACCGACGGCGCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAGAAG
GTCTCGGACATCATTCGTAGTTTCCGTCCTACCAAGGTTAGTTCAATGGC
CCTTATGGACCGGGCCAGCCATCTAATCGTCTGTTTCTCCAACCATAGGC
ATTCCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACGTCGCTGGACT
TTGATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGATGAGACTATC
CAGGTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAA
GAAGTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGTCGTCAGGTCC
TCCATGCGAGCACCAAGGTTGACGGTATGTCTGCTCCAGCGCGCCGCCAT
CCTTACCCTCTGTTCTGACCGGCCTAGATTCATTGCGCTTGTTGGACCTT
CACAATGAAGGCTACATTCGCTACTTCCAGGGTCACACCGACAAAGTCAC
CTGTTTAGCTCTATCTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAG
ACGATACCGTTGCACTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAA
TTGAAACTTGCGACTCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGT
CATTGCCATTGCATCCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCC
GCAACTACGACAAAGCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAG
GAACGGTATACGCCTTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATT
CTCCAATGATGGCAAGCACTTGCTTGTCGGGACAGACTACCATGGGCATT
TCATTCTCGATGCCTTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAG
GCCGGATCACCCGGAAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCT
CGGTCAGGGAGATGCGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTG
GTTCGGGAGATCATTCCGACATGCTAGTGTGGGATCTACAACAATCTCCT
CCAGAGCCAAACGGTCTATTGCAGCCAATGACTAGACTATCACATCGAGG
ACGGACTGCCATCGTTGAATACAATCCGAGGTACAACATGATTGCGTCTG
CCGACAAAGAGACAGTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCT
GAAAAGTAG
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Coding sequence (CDS) from alignment at ch1:3509873..3511281-

>KJC3_001355-T1 ID=KJC3_001355-T1|Name=KJC3_001355-T1|organism=Aspergillus niger KJC3|type=CDS|length=3339bp|location=Sequence derived from alignment at ch1:3509873..3511281- (Aspergillus niger KJC3)
ATTCATTGCGCTTGTTGGACCTTCACAATGAAGGCTACATTCGCTACTTC
CAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGA
CTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCG
GCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTG
GCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGC
GTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCA
GTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGC
AGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGT
CGGGACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCG
TTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCG
GTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACC
CGACGGGCGATACGTGGTTGGTGGTTCGGGAGATCATTCCGACATGCTAG
TGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCA
ATGACTAGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCC
GAGGTACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTC
CAGAGGACCCTTCCAGATCTTCTGAAAAGTAGGCATTCCGAGGCCCAAAG
CAGGATACCTCTAATTATGTGACGTCGCTGGACTTTGATGACCAAGGAGA
TTACTTGGTGGCATCGGGTGATGATGAGACTATCCAGGTTTTCGATATCA
AGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAAGAAGTACGGCGCCCAT
CTAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCCATGCGAGCACCAA
GGTTGACGATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCC
CAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTT
CCGTCCTACCAAGATTCATTGCGCTTGTTGGACCTTCACAATGAAGGCTA
CATTCGCTACTTCCAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTAT
CTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCA
CTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGAC
TCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCAT
CCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAA
GCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCC
TTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCA
AGCACTTGCTTGTCGGGACAGACTACCATGGGCATTTCATTCTCGATGCC
TTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGG
AAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATG
CGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTGGTTCGGGAGATCAT
TCCGACATGCTAGTGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGG
TCTATTGCAGCCAATGACTAGACTATCACATCGAGGACGGACTGCCATCG
TTGAATACAATCCGAGGTACAACATGATTGCGTCTGCCGACAAAGAGACA
GTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCTGAAAAGTAGGCATT
CCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACGTCGCTGGACTTTG
ATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGATGAGACTATCCAG
GTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAAGAA
GTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCC
ATGCGAGCACCAAGGTTGACGATGGCTGAAGGTCAACCGCAACCGACGGC
GCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACA
TCATTCGTAGTTTCCGTCCTACCAAGATTCATTGCGCTTGTTGGACCTTC
ACAATGAAGGCTACATTCGCTACTTCCAGGGTCACACCGACAAAGTCACC
TGTTTAGCTCTATCTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAGA
CGATACCGTTGCACTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAAT
TGAAACTTGCGACTCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGTC
ATTGCCATTGCATCCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCCG
CAACTACGACAAAGCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAGG
AACGGTATACGCCTTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATTC
TCCAATGATGGCAAGCACTTGCTTGTCGGGACAGACTACCATGGGCATTT
CATTCTCGATGCCTTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAGG
CCGGATCACCCGGAAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCTC
GGTCAGGGAGATGCGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTGG
TTCGGGAGATCATTCCGACATGCTAGTGTGGGATCTACAACAATCTCCTC
CAGAGCCAAACGGTCTATTGCAGCCAATGACTAGACTATCACATCGAGGA
CGGACTGCCATCGTTGAATACAATCCGAGGTACAACATGATTGCGTCTGC
CGACAAAGAGACAGTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCTG
AAAAGTAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACG
TCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGA
TGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGG
TTCCCAGCAAGAAGTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGT
CGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGATGGCTGAAGGTCAAC
CGCAACCGACGGCGCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAG
AAGGTCTCGGACATCATTCGTAGTTTCCGTCCTACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001355KJC3_001355Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001355-T1KJC3_001355-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001355-T1.cdsKJC3_001355-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001355-T1.exon3KJC3_001355-T1.exon3Aspergillus niger KJC3exon
KJC3_001355-T1.exon2KJC3_001355-T1.exon2Aspergillus niger KJC3exon
KJC3_001355-T1.exon1KJC3_001355-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001355-T1.utr5p1KJC3_001355-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3509873..3511281 -
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