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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3516602..3517623- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001358-T1 ID=KJC3_001358-T1|Name=KJC3_001358-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1022bp|location=Sequence derived from alignment at ch1:3516602..3517623- (Aspergillus niger KJC3)
ACTAAGTAAACCGATAGGTTTGTTCAAGCTGTCAAACGGGCTGCGGCACA
CACACCGCCCGCTAGCTAAACCACCACCTAACCACCAACTCTGAACTTCC
AGCTCCGAGCGGGCGCCGCAAAACACCAGAAATAATTACAGCTTCAGATC
ACACCCACCTTCCTACCACACATTCCTCCACCCTCACACCCTCGTCTCTT
CAACCAAACCGATCCTCGATCTTATACCTCCCCACTCAGAGGGACCGAAA
CCCGCCAAAATGCCATACCTCCCAACCTCCCAATCCTACCTCGAACAATC
CTCTCTCCTCCTCCAAGCCTACCCAGACACGGTACATGATTCCCTTACCC
CGAGTCTCTCAACAAAACATCTACTACCAAATTGATACTAACACTGGTTT
CTGCAGAGAATCACAACAAAATACACATTCCCGCGCACAACATCCACCTC
CACATCCACAAAACAACAGCAACAACAACAACAACCCACATCAACAGAAG
ACACCGAACCCAAGCCCCGCATCGCCACGCTCGAACTCAAAACCTATCAC
CCGGGATCAGGCATCTGTTTGAAATACCGCACGAACAAGGGCGCCGAGGT
GGGCCGGTTGATCACCTCGTTGGGGAAGTTGGCGGCCGGGGCTGATGTTG
AGGGGTTGGGATTGAGTAATCCTACTGCTGCTGCTGCTCCTGCGGATGTG
GAGATGGGGGATGCTCTTGCTCCTCCTGCTGGTGCTGCTGGTGGGAATGG
AGAGGGGCAGACGGTGGTAGCTGGGGATAGTAGTAATGCTGGTGGTGCTG
GGAAGGGAGGGAAAGGGAAGAAGAAGGGGGGGAAGGGGAAGAGGTGATTG
ATTGATTTATCTCTCTATTTCTTTTTCTCTCTAGCTGGCTAGCTATTTAG
TTATTACTTTCTGTTTCTTGAGGTGTGCATATTTATTTTTATTTTATATA
AACTAGGTTTGGTGGTGAGGATTCAAGATCATGATCATAGCTGGAAGATA
TCCGTATCTATTTAGTCGGTTG back to topCoding sequence (CDS) from alignment at ch1:3516602..3517623- >KJC3_001358-T1 ID=KJC3_001358-T1|Name=KJC3_001358-T1|organism=Aspergillus niger KJC3|type=CDS|length=1026bp|location=Sequence derived from alignment at ch1:3516602..3517623- (Aspergillus niger KJC3)
AGAATCACAACAAAATACACATTCCCGCGCACAACATCCACCTCCACATC
CACAAAACAACAGCAACAACAACAACAACCCACATCAACAGAAGACACCG
AACCCAAGCCCCGCATCGCCACGCTCGAACTCAAAACCTATCACCCGGGA
TCAGGCATCTGTTTGAAATACCGCACGAACAAGGGCGCCGAGGTGGGCCG
GTTGATCACCTCGTTGGGGAAGTTGGCGGCCGGGGCTGATGTTGAGGGGT
TGGGATTGAGTAATCCTACTGCTGCTGCTGCTCCTGCGGATGTGGAGATG
GGGGATGCTCTTGCTCCTCCTGCTGGTGCTGCTGGTGGGAATGGAGAGGG
GCAGACGGTGGTAGCTGGGGATAGTAGTAATGCTGGTGGTGCTGGGAAGG
GAGGGAAAGGGAAGAAGAAGGGGGGGAAGGGGAAGAGGTGAATGCCATAC
CTCCCAACCTCCCAATCCTACCTCGAACAATCCTCTCTCCTCCTCCAAGC
CTACCCAGACACGAGAATCACAACAAAATACACATTCCCGCGCACAACAT
CCACCTCCACATCCACAAAACAACAGCAACAACAACAACAACCCACATCA
ACAGAAGACACCGAACCCAAGCCCCGCATCGCCACGCTCGAACTCAAAAC
CTATCACCCGGGATCAGGCATCTGTTTGAAATACCGCACGAACAAGGGCG
CCGAGGTGGGCCGGTTGATCACCTCGTTGGGGAAGTTGGCGGCCGGGGCT
GATGTTGAGGGGTTGGGATTGAGTAATCCTACTGCTGCTGCTGCTCCTGC
GGATGTGGAGATGGGGGATGCTCTTGCTCCTCCTGCTGGTGCTGCTGGTG
GGAATGGAGAGGGGCAGACGGTGGTAGCTGGGGATAGTAGTAATGCTGGT
GGTGCTGGGAAGGGAGGGAAAGGGAAGAAGAAGGGGGGGAAGGGGAAGAG
GTGAATGCCATACCTCCCAACCTCCCAATCCTACCTCGAACAATCCTCTC
TCCTCCTCCAAGCCTACCCAGACACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001358-T1.utr3p1 | KJC3_001358-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001358-T1.utr5p1 | KJC3_001358-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR039432 |
| DBxref | PFAM:PF05486 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3516602..3517623 - |
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