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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3522055..3524939- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001360-T2 ID=KJC3_001360-T2|Name=KJC3_001360-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2885bp|location=Sequence derived from alignment at ch1:3522055..3524939- (Aspergillus niger KJC3)
GGGGAATTGACAATGGGGGATCGACGACGGGGAAGCATGGGTTAAGCGCC
GACAGCTAAGAATAGACCGCCGGTCGATCTCGGGGTTTCAACGTGCCCGA
TATGCTTATGCACGTCTATGGTAAGTGATATGAACGCTTTGAGTTAGTTG
AGTTATCGACAGTCAAACATAACAGGAATATCTGCTAGACATCCTATTCT
AGCCGAGGTATCGAGTGGGCAGATGATGTCCATGCAACACATCTGTTACA
GTAAGCGAGAACCAAGCATCAAACATCCCGGGCATAGAAGCTTTTATCGG
CTGCTACCGGTCGATAGTGGTAACCGGCTTTGTAACCTTGCAAACCCGGT
TGGCACTCCATATCTACACCAAGCACTTCTAACCCTTGCATCCGCGGCAG
GGAGGACAGGGTTTTCCAGCATCCAACGCAACAAGACCACCGGCAAAAGC
CTGTAAGAGGCCGCGATTTCCAGTTGGACTGGAGTTCGCTGGCGCAGGAT
GCAACTCGGACTCGAACCCGCAATGTAACTCTATGCCATATCAACAATTA
TACCCCCTATCGTGCACGTCCGAGTCACACAAGGCACCCCCATGGAATGC
GGAGTCCCGATGGTGTGCGCCGACAAAACCTGTCAATCTAGCCCAGTGCC
GTCTAGACCCTGGTAAACTCGACTATAGCACATACCAACGCACGATGGCC
TCCGTGAGGGAGAGCTCCTTACTTTGAACCGTCGCTGGAGGGGTCATGAG
ATATCTTTCCGCCACACCACGACCCTGCGCGATTTTGTCGCAGAACCGGC
CAGACTGAGTGGCTTCGGTTGGGTATATAAGCTCACTGACGGGGCCCATC
ATGGTAGGAAGTCAACCATGGGGCTCGTGGCGGAAACCCGACAGGCCATC
CGGGACTCCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGC
CATTTTCGCGCTCTCCGGAATCAGTAGGGGGTTCGATGAAGGTAGAAAGT
GAAGATCATATGTCATGCAGGGTGCTGATCTTCGCAGCGAATATCGCATC
GTTGGTCGTGCAATCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCAAT
CCCCCGACGAATATGCCAATACCAAAGGTTGGATTGTGTCCATGTTCACG
GCTGGAATGACCTTGGGCTGTCTGCTAGTAAGCTATCAACTCAGAAGGTA
GATATATGTCGGGTTAACAGCTACTGTAGTGTTTACCTTTCAATGATCGA
ATTGGGCGGCGGTGGACGATGCGGCTATCGACCCTAGTATATGTCTCTGG
AGTCTTGGGACAGGGCCTTTGTAATGGAAACCTGTCCGGACTGTACGCAT
CGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACCCCGCCG
ATGTATATCTCCGAGGTACCCAAATGATGCTTGAGTGGGGACTGGCAACA
GACTGACTTTGTTGCAGGTAGCCCCTAAGACCATCCGCGGGCTCCTCGCA
GTTCAATTTGCCGCATGCCAGCAACTAGGGGTCGTTTTTGGATTCTTTAT
CAACTATGGCATTACCAAAAACTACGATGGAACAGATATGCAGTGGATGT
TCCCAACCTTGATCCAACTGCTCCCTGCAGCAGTCTGGGGACTGGGACTC
CTGATCTGTGAAGAATCTCCCCGGTGGCTGCTGTACGTGGGCAGGCGAAC
TCAGGCAGTAGCGGTACTTGCAAAGCTCCGCCACTTGCCCCCGAGCCACC
CAACCGTAGTCGCAGAAATTGCTGTCATGGAATTCCAGATCCTGCAGGAG
AGGGAAGCGGCCACGGGCACATCACAATGGGACCTATTCAAGGAGACGTT
TGTCCCGGTGGAGAACCGGCGTCGGTTCTGCCTAGTGATGCTGGCACATT
TGTTTTCGCAATGGTCCGGAGGCAATGCCATCACGCAATATTTGCCGACA
ATCTTGGGATACCTGGGCACTTCCGGGGATACCTTGTCCCTAACCACGGG
CGTCTATGCCGTGGTCAAGTTCACCACCTTGCTAATCTTCTCACTTGTAG
TGGTGGATTTTGTAGGCCGACGGCGGTCTCTTATGGCGGGAATCACCCTC
CAGATCCTGACGTTGGTATATCTCGCTTGTTATCTTGGGATATCCCGAGA
GATGTCGACGACGACCATCCTGCACACGGCCAGCGCGACGCAGGCCTCGA
AGGCGGCGATCGCAGCCATCTTTGTGCATGGGGTTGGGTGGGTGATCGGA
TGGTTCTCGATGCCCTTCCTGATCGGATCGGAGATCTTTCCCATCCGGAT
CCGATCGCTGGCCTTGTCGATGGGGATGGCGGGGCACTGGCTGTTTGCGT
TTGGGTGCACGCGCGCGACGCCCGACTTGCTGGAGGTGATGGAGGAGTGG
GGAGCCTTTGCATTTTTTGCGTGCATCTGCCTTGTGTCGCTGGTGTACGT
GTTCTTTGCGATGCCAGTAAGTGAACCAACTCCCCGATATGACGATGGAA
GAAGGGAGAGACGTAACGGCGGGAGTCTGACAGCGCACAGGACACAACGG
GCCGATCGCTAGAGGCACTGGACGGACTGTTCCAACGACCGTGGTACACG
GTTTATCAGGTAGCGTATGCGAATGAGGAGGACGAGGAAATCGAGGTGCA
AGCGATACAGGAACGGGGAAAGTCGGAGTTGGCGATAGAAGCATAAAGCA
AGTGGGCCACCATCGATGGATGATGATGGTGGTGCAACTGATCCCATCTT
TTCTACTTTGTATGTTGTATCATGAACCACGTGGGGGTTGTTGTGAGACT
AGTAGATCAAGAGTAGAACAACACGAATCATGGGGAACAATGCATAGCCA
CTCGGGTGTTCTGGTCGGGTATAAGTTCAATAAAC back to topCoding sequence (CDS) from alignment at ch1:3522055..3524939- >KJC3_001360-T2 ID=KJC3_001360-T2|Name=KJC3_001360-T2|organism=Aspergillus niger KJC3|type=CDS|length=6180bp|location=Sequence derived from alignment at ch1:3522055..3524939- (Aspergillus niger KJC3)
GTAGCCCCTAAGACCATCCGCGGGCTCCTCGCAGTTCAATTTGCCGCATG
CCAGCAACTAGGGGTCGTTTTTGGATTCTTTATCAACTATGGCATTACCA
AAAACTACGATGGAACAGATATGCAGTGGATGTTCCCAACCTTGATCCAA
CTGCTCCCTGCAGCAGTCTGGGGACTGGGACTCCTGATCTGTGAAGAATC
TCCCCGGTGGCTGCTGTACGTGGGCAGGCGAACTCAGGCAGTAGCGGTAC
TTGCAAAGCTCCGCCACTTGCCCCCGAGCCACCCAACCGTAGTCGCAGAA
ATTGCTGTCATGGAATTCCAGATCCTGCAGGAGAGGGAAGCGGCCACGGG
CACATCACAATGGGACCTATTCAAGGAGACGTTTGTCCCGGTGGAGAACC
GGCGTCGGTTCTGCCTAGTGATGCTGGCACATTTGTTTTCGCAATGGTCC
GGAGGCAATGCCATCACGCAATATTTGCCGACAATCTTGGGATACCTGGG
CACTTCCGGGGATACCTTGTCCCTAACCACGGGCGTCTATGCCGTGGTCA
AGTTCACCACCTTGCTAATCTTCTCACTTGTAGTGGTGGATTTTGTAGGC
CGACGGCGGTCTCTTATGGCGGGAATCACCCTCCAGATCCTGACGTTGGT
ATATCTCGCTTGTTATCTTGGGATATCCCGAGAGATGTCGACGACGACCA
TCCTGCACACGGCCAGCGCGACGCAGGCCTCGAAGGCGGCGATCGCAGCC
ATCTTTGTGCATGGGGTTGGGTGGGTGATCGGATGGTTCTCGATGCCCTT
CCTGATCGGATCGGAGATCTTTCCCATCCGGATCCGATCGCTGGCCTTGT
CGATGGGGATGGCGGGGCACTGGCTGTTTGCGTTTGGGTGCACGCGCGCG
ACGCCCGACTTGCTGGAGGTGATGGAGGAGTGGGGAGCCTTTGCATTTTT
TGCGTGCATCTGCCTTGTGTCGCTGGTGTACGTGTTCTTTGCGATGCCAG
TAAGTGAACCAACTCCCCGATATGACGATGGAAGAAGGGAGAGACGTAAC
GGCGGGAGTCTGACAGCGCACAGGACACAACGGGCCGATCGCTAGTGTTT
ACCTTTCAATGATCGAATTGGGCGGCGGTGGACGATGCGGCTATCGACCC
TAGTATATGTCTCTGGAGTCTTGGGACAGGGCCTTTGTAATGGAAACCTG
TCCGGACTGTACGCATCGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTT
GACTGTGACCCCGCCGATGTATATCTCCGAGCGAATATCGCATCGTTGGT
CGTGCAATCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCG
ACGAATATGCCAATACCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGA
ATGACCTTGGGCTGTCTGCTAATGGGGCTCGTGGCGGAAACCCGACAGGC
CATCCGGGACTCCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACA
TTGCCATTTTCGCGCTCTCCGGAATCAGTAGGGGGTTCGATGAAGGTAGC
CCCTAAGACCATCCGCGGGCTCCTCGCAGTTCAATTTGCCGCATGCCAGC
AACTAGGGGTCGTTTTTGGATTCTTTATCAACTATGGCATTACCAAAAAC
TACGATGGAACAGATATGCAGTGGATGTTCCCAACCTTGATCCAACTGCT
CCCTGCAGCAGTCTGGGGACTGGGACTCCTGATCTGTGAAGAATCTCCCC
GGTGGCTGCTGTACGTGGGCAGGCGAACTCAGGCAGTAGCGGTACTTGCA
AAGCTCCGCCACTTGCCCCCGAGCCACCCAACCGTAGTCGCAGAAATTGC
TGTCATGGAATTCCAGATCCTGCAGGAGAGGGAAGCGGCCACGGGCACAT
CACAATGGGACCTATTCAAGGAGACGTTTGTCCCGGTGGAGAACCGGCGT
CGGTTCTGCCTAGTGATGCTGGCACATTTGTTTTCGCAATGGTCCGGAGG
CAATGCCATCACGCAATATTTGCCGACAATCTTGGGATACCTGGGCACTT
CCGGGGATACCTTGTCCCTAACCACGGGCGTCTATGCCGTGGTCAAGTTC
ACCACCTTGCTAATCTTCTCACTTGTAGTGGTGGATTTTGTAGGCCGACG
GCGGTCTCTTATGGCGGGAATCACCCTCCAGATCCTGACGTTGGTATATC
TCGCTTGTTATCTTGGGATATCCCGAGAGATGTCGACGACGACCATCCTG
CACACGGCCAGCGCGACGCAGGCCTCGAAGGCGGCGATCGCAGCCATCTT
TGTGCATGGGGTTGGGTGGGTGATCGGATGGTTCTCGATGCCCTTCCTGA
TCGGATCGGAGATCTTTCCCATCCGGATCCGATCGCTGGCCTTGTCGATG
GGGATGGCGGGGCACTGGCTGTTTGCGTTTGGGTGCACGCGCGCGACGCC
CGACTTGCTGGAGGTGATGGAGGAGTGGGGAGCCTTTGCATTTTTTGCGT
GCATCTGCCTTGTGTCGCTGGTGTACGTGTTCTTTGCGATGCCAGTAAGT
GAACCAACTCCCCGATATGACGATGGAAGAAGGGAGAGACGTAACGGCGG
GAGTCTGACAGCGCACAGGACACAACGGGCCGATCGCTAGTGTTTACCTT
TCAATGATCGAATTGGGCGGCGGTGGACGATGCGGCTATCGACCCTAGTA
TATGTCTCTGGAGTCTTGGGACAGGGCCTTTGTAATGGAAACCTGTCCGG
ACTGTACGCATCGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTG
TGACCCCGCCGATGTATATCTCCGAGCGAATATCGCATCGTTGGTCGTGC
AATCTCGGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCGACGAA
TATGCCAATACCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGAATGAC
CTTGGGCTGTCTGCTAATGGGGCTCGTGGCGGAAACCCGACAGGCCATCC
GGGACTCCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGCC
ATTTTCGCGCTCTCCGGAATCAGTAGGGGGTTCGATGAAGGTAGCCCCTA
AGACCATCCGCGGGCTCCTCGCAGTTCAATTTGCCGCATGCCAGCAACTA
GGGGTCGTTTTTGGATTCTTTATCAACTATGGCATTACCAAAAACTACGA
TGGAACAGATATGCAGTGGATGTTCCCAACCTTGATCCAACTGCTCCCTG
CAGCAGTCTGGGGACTGGGACTCCTGATCTGTGAAGAATCTCCCCGGTGG
CTGCTGTACGTGGGCAGGCGAACTCAGGCAGTAGCGGTACTTGCAAAGCT
CCGCCACTTGCCCCCGAGCCACCCAACCGTAGTCGCAGAAATTGCTGTCA
TGGAATTCCAGATCCTGCAGGAGAGGGAAGCGGCCACGGGCACATCACAA
TGGGACCTATTCAAGGAGACGTTTGTCCCGGTGGAGAACCGGCGTCGGTT
CTGCCTAGTGATGCTGGCACATTTGTTTTCGCAATGGTCCGGAGGCAATG
CCATCACGCAATATTTGCCGACAATCTTGGGATACCTGGGCACTTCCGGG
GATACCTTGTCCCTAACCACGGGCGTCTATGCCGTGGTCAAGTTCACCAC
CTTGCTAATCTTCTCACTTGTAGTGGTGGATTTTGTAGGCCGACGGCGGT
CTCTTATGGCGGGAATCACCCTCCAGATCCTGACGTTGGTATATCTCGCT
TGTTATCTTGGGATATCCCGAGAGATGTCGACGACGACCATCCTGCACAC
GGCCAGCGCGACGCAGGCCTCGAAGGCGGCGATCGCAGCCATCTTTGTGC
ATGGGGTTGGGTGGGTGATCGGATGGTTCTCGATGCCCTTCCTGATCGGA
TCGGAGATCTTTCCCATCCGGATCCGATCGCTGGCCTTGTCGATGGGGAT
GGCGGGGCACTGGCTGTTTGCGTTTGGGTGCACGCGCGCGACGCCCGACT
TGCTGGAGGTGATGGAGGAGTGGGGAGCCTTTGCATTTTTTGCGTGCATC
TGCCTTGTGTCGCTGGTGTACGTGTTCTTTGCGATGCCAGTAAGTGAACC
AACTCCCCGATATGACGATGGAAGAAGGGAGAGACGTAACGGCGGGAGTC
TGACAGCGCACAGGACACAACGGGCCGATCGCTAGTGTTTACCTTTCAAT
GATCGAATTGGGCGGCGGTGGACGATGCGGCTATCGACCCTAGTATATGT
CTCTGGAGTCTTGGGACAGGGCCTTTGTAATGGAAACCTGTCCGGACTGT
ACGCATCGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACC
CCGCCGATGTATATCTCCGAGCGAATATCGCATCGTTGGTCGTGCAATCT
CGGTTTCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCGACGAATATGC
CAATACCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGAATGACCTTGG
GCTGTCTGCTAATGGGGCTCGTGGCGGAAACCCGACAGGCCATCCGGGAC
TCCCCTCGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGCCATTTT
CGCGCTCTCCGGAATCAGTAGGGGGTTCGATGAAGGTAGCCCCTAAGACC
ATCCGCGGGCTCCTCGCAGTTCAATTTGCCGCATGCCAGCAACTAGGGGT
CGTTTTTGGATTCTTTATCAACTATGGCATTACCAAAAACTACGATGGAA
CAGATATGCAGTGGATGTTCCCAACCTTGATCCAACTGCTCCCTGCAGCA
GTCTGGGGACTGGGACTCCTGATCTGTGAAGAATCTCCCCGGTGGCTGCT
GTACGTGGGCAGGCGAACTCAGGCAGTAGCGGTACTTGCAAAGCTCCGCC
ACTTGCCCCCGAGCCACCCAACCGTAGTCGCAGAAATTGCTGTCATGGAA
TTCCAGATCCTGCAGGAGAGGGAAGCGGCCACGGGCACATCACAATGGGA
CCTATTCAAGGAGACGTTTGTCCCGGTGGAGAACCGGCGTCGGTTCTGCC
TAGTGATGCTGGCACATTTGTTTTCGCAATGGTCCGGAGGCAATGCCATC
ACGCAATATTTGCCGACAATCTTGGGATACCTGGGCACTTCCGGGGATAC
CTTGTCCCTAACCACGGGCGTCTATGCCGTGGTCAAGTTCACCACCTTGC
TAATCTTCTCACTTGTAGTGGTGGATTTTGTAGGCCGACGGCGGTCTCTT
ATGGCGGGAATCACCCTCCAGATCCTGACGTTGGTATATCTCGCTTGTTA
TCTTGGGATATCCCGAGAGATGTCGACGACGACCATCCTGCACACGGCCA
GCGCGACGCAGGCCTCGAAGGCGGCGATCGCAGCCATCTTTGTGCATGGG
GTTGGGTGGGTGATCGGATGGTTCTCGATGCCCTTCCTGATCGGATCGGA
GATCTTTCCCATCCGGATCCGATCGCTGGCCTTGTCGATGGGGATGGCGG
GGCACTGGCTGTTTGCGTTTGGGTGCACGCGCGCGACGCCCGACTTGCTG
GAGGTGATGGAGGAGTGGGGAGCCTTTGCATTTTTTGCGTGCATCTGCCT
TGTGTCGCTGGTGTACGTGTTCTTTGCGATGCCAGTAAGTGAACCAACTC
CCCGATATGACGATGGAAGAAGGGAGAGACGTAACGGCGGGAGTCTGACA
GCGCACAGGACACAACGGGCCGATCGCTAGTGTTTACCTTTCAATGATCG
AATTGGGCGGCGGTGGACGATGCGGCTATCGACCCTAGTATATGTCTCTG
GAGTCTTGGGACAGGGCCTTTGTAATGGAAACCTGTCCGGACTGTACGCA
TCGAGACTGATCGCGGGTCTCGGGGTGGGCGGCTTGACTGTGACCCCGCC
GATGTATATCTCCGAGCGAATATCGCATCGTTGGTCGTGCAATCTCGGTT
TCGGATCAAATTCGGGCTCGGCCAGCAATCCCCCGACGAATATGCCAATA
CCAAAGGTTGGATTGTGTCCATGTTCACGGCTGGAATGACCTTGGGCTGT
CTGCTAATGGGGCTCGTGGCGGAAACCCGACAGGCCATCCGGGACTCCCC
TCGGGGGGTCTTTAACTGGTATTTGTTGATGAACATTGCCATTTTCGCGC
TCTCCGGAATCAGTAGGGGGTTCGATGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001360-T2.utr3p1 | KJC3_001360-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001360-T2.utr5p1 | KJC3_001360-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3522055..3524939 - |
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