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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3527684..3528720+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001363-T1 ID=KJC3_001363-T1|Name=KJC3_001363-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1037bp|location=Sequence derived from alignment at ch1:3527684..3528720+ (Aspergillus niger KJC3)
TACTACTAGTAGATCACTCAGTGATAGTACCACCAAGATCACACGCATCC
ACTACTCAACACATCCACCACCATGAACGCGGTTCTCATAACAGGCGCGA
CCGGCAAACAGGGAGGTTCTCTCATTCGAAACCTCGTCTCCCGAAACTCT
TCCTTGGAGATCTTAGCCGTCACGCGAGACTCCTCTTCCGCTTCAGCTCA
ACGGCTGAAACAGTTGTCTTCCAACATCAAACTGGTAGAAGGCAACTTGG
ACAACCCGGCAGAGATTTTTCGCAATGCGCGCGCCCAGACATCGTCTCCG
ATTTGGGGTGTCTTTAGTGTCCAGGTGGGGATTCCCAGCTTTTCCAATCA
CCATCACAATGATCAAATACTGATTGACTCTACTAGGTGGCCATCGGCAG
CAATGTCGACGAGGAAGCACAGGGAAAGAAATTGGTCGATGAAGCCCTTA
AGCAAAAAGTGAAGTACTTCGTCTACAGCTCTGTGGACCGTGGCGGGGAG
CGTTCCTGGGACAACCCGACCGATGTCCCTCACTTTCTGAGGAAGCATCA
CATTGAGCATCACCTGGTGGATAAGGCTAAAGGAACTGAAATGGACTGGG
CGATCCTGCGCCCCGTGGCATTCATGGACAACATGGTCCCTGGCTTCCTG
GGCAAGGTCTTTGCGACAGCCTGGAAAATGGCACTTAAGGGCAAATCCCT
TCAGGTGGTCGCTGTCAGTGACATCGGTCACTTTGGCGCAGAAGCTTTCC
TTAACCCTGATGAGTACAAGGGCCGGGCGATCTCGTTGGCGGGAGATGAT
TTGACGTTCGATCAATTGGCACAGGTGTTCCAGCAGAGGACGGGTCAGCG
GATACCCATGACCTTCCAGTTCGTGTGTTCCTTGCTGTTAACCGCTGTCA
AGGATATGGGGTATATGTACAGGTGGTTCCATGATGAAGGATATCAGGTT
GATATTGGCGCGCTAAAGAAGAAGCATCCCGGATTGAAGAACTTTGGGGA
TTGGCTCGAGCAGGAGAGTGATTTTGTCAAGCGGTAG back to topCoding sequence (CDS) from alignment at ch1:3527684..3528720+ >KJC3_001363-T1 ID=KJC3_001363-T1|Name=KJC3_001363-T1|organism=Aspergillus niger KJC3|type=CDS|length=1806bp|location=Sequence derived from alignment at ch1:3527684..3528720+ (Aspergillus niger KJC3)
ATGAACGCGGTTCTCATAACAGGCGCGACCGGCAAACAGGGAGGTTCTCT
CATTCGAAACCTCGTCTCCCGAAACTCTTCCTTGGAGATCTTAGCCGTCA
CGCGAGACTCCTCTTCCGCTTCAGCTCAACGGCTGAAACAGTTGTCTTCC
AACATCAAACTGGTAGAAGGCAACTTGGACAACCCGGCAGAGATTTTTCG
CAATGCGCGCGCCCAGACATCGTCTCCGATTTGGGGTGTCTTTAGTGTCC
AGGTGGCCATCGGCAGCAATGTCGACGAGGAAGCACAGGGAAAGAAATTG
GTCGATGAAGCCCTTAAGCAAAAAGTGAAGTACTTCGTCTACAGCTCTGT
GGACCGTGGCGGGGAGCGTTCCTGGGACAACCCGACCGATGTCCCTCACT
TTCTGAGGAAGCATCACATTGAGCATCACCTGGTGGATAAGGCTAAAGGA
ACTGAAATGGACTGGGCGATCCTGCGCCCCGTGGCATTCATGGACAACAT
GGTCCCTGGCTTCCTGGGCAAGGTCTTTGCGACAGCCTGGAAAATGGCAC
TTAAGGGCAAATCCCTTCAGGTGGTCGCTGTCAGTGACATCGGTCACTTT
GGCGCAGAAGCTTTCCTTAACCCTGATGAGTACAAGGGCCGGGCGATCTC
GTTGGCGGGAGATGATTTGACGTTCGATCAATTGGCACAGGTGTTCCAGC
AGAGGACGGGTCAGCGGATACCCATGACCTTCCAGTTCGTGTGTTCCTTG
CTGTTAACCGCTGTCAAGGATATGGGGTATATGTACAGGTGGTTCCATGA
TGAAGGATATCAGGTTGATATTGGCGCGCTAAAGAAGAAGCATCCCGGAT
TGAAGAACTTTGGGGATTGGCTCGAGCAGGAGAGTGATTTTGTCAAGCGG
TAGATGAACGCGGTTCTCATAACAGGCGCGACCGGCAAACAGGGAGGTTC
TCTCATTCGAAACCTCGTCTCCCGAAACTCTTCCTTGGAGATCTTAGCCG
TCACGCGAGACTCCTCTTCCGCTTCAGCTCAACGGCTGAAACAGTTGTCT
TCCAACATCAAACTGGTAGAAGGCAACTTGGACAACCCGGCAGAGATTTT
TCGCAATGCGCGCGCCCAGACATCGTCTCCGATTTGGGGTGTCTTTAGTG
TCCAGGTGGCCATCGGCAGCAATGTCGACGAGGAAGCACAGGGAAAGAAA
TTGGTCGATGAAGCCCTTAAGCAAAAAGTGAAGTACTTCGTCTACAGCTC
TGTGGACCGTGGCGGGGAGCGTTCCTGGGACAACCCGACCGATGTCCCTC
ACTTTCTGAGGAAGCATCACATTGAGCATCACCTGGTGGATAAGGCTAAA
GGAACTGAAATGGACTGGGCGATCCTGCGCCCCGTGGCATTCATGGACAA
CATGGTCCCTGGCTTCCTGGGCAAGGTCTTTGCGACAGCCTGGAAAATGG
CACTTAAGGGCAAATCCCTTCAGGTGGTCGCTGTCAGTGACATCGGTCAC
TTTGGCGCAGAAGCTTTCCTTAACCCTGATGAGTACAAGGGCCGGGCGAT
CTCGTTGGCGGGAGATGATTTGACGTTCGATCAATTGGCACAGGTGTTCC
AGCAGAGGACGGGTCAGCGGATACCCATGACCTTCCAGTTCGTGTGTTCC
TTGCTGTTAACCGCTGTCAAGGATATGGGGTATATGTACAGGTGGTTCCA
TGATGAAGGATATCAGGTTGATATTGGCGCGCTAAAGAAGAAGCATCCCG
GATTGAAGAACTTTGGGGATTGGCTCGAGCAGGAGAGTGATTTTGTCAAG
CGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001363-T1.utr5p1 | KJC3_001363-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3527684..3528720 + |
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