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KJC3_001369-T1, KJC3_001369-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001369-T1
Unique NameKJC3_001369-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3538211..3540593+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001369-T1 ID=KJC3_001369-T1|Name=KJC3_001369-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2383bp|location=Sequence derived from alignment at ch1:3538211..3540593+ (Aspergillus niger KJC3)
CGATCGGGCAATCGGCAATACCACCCCGCAGCATCACAGCCACCCTCTAT
AAGTGAAGTCCAACCTACTACTCCCTACTGTCCTCCCCACATGTATATCT
CACACTAATAATGACACCTGCACAGCTACACCCAAGCTTCTCAGATCGAA
CCGATTTCGAGAACGCCTCTCGAGGCTGGATTGGGTCTCTCGAGCCCGGC
ATCATCCGAGCAGCCGATGGCCAACCCGTCTACAACAACGACGCCTACCA
CTTCCTGCAGGGATCAGAATGTCCCAAAACAGCAAACCCAAAGCTATGGA
GACAGGGCCAATTGGCATCCATGCAGGGACTCTTCCAGGTCGTCCCGGGG
ATCTACCAGATCCGCGGCCTGGACCTCGCCAACATGACCGTGGTCGAAGG
CACCGAGGGACTCATCGTCATTGATCCTCTAACTTCCGTGGAATGCGCTG
CTGCTGCCCTGGCACTGTATAGGAAGCACCGTGGCAATAGACCCGTTACG
GGGGTAATCTACTCTCATTCCCATATAGACCACTTTGGCGGAGCGCAGGG
TGTGCTTCCTGCCTCTGACGCAGTCCGAACGAGCCCCATCCCGATTGTCG
CGCCAGAGGGGTTCGTAGAAGAAGCCCTGAGTGAGAATATGTACGTTGGT
CCGGCTATGCGTCGTCGCGCGCAATACATGTACGGAGCCCAGTTACCCAA
GGCTGCGGACGGTCAGATTGGCTGCGGCATCGGCATGACCGTGTCGATGG
GAACAAACTCGTTCGTGCCTCCAAACACTATTGTCACCTCGACTGGCGAA
GAACGAATCATAGATGGCGTCCGCATACAATTCCAACTCGTGCCCGAGAC
GGAAGCGCCAGCGGAGATGAACTTTTATTTCCCTGATCACCGCGCGCTGT
ATATTGCCGAGTGTGCAACGCACAGTCTGCATAACATCATCACGCTGCGC
GGGGCTCTGGTGCGCGATGCGAAAGCCTGGGCACGGTATTTGGATGAGTC
GCTGGTCCTATTTGGCCAGGAGTCAGATGTGTTATTTGCGGGCCATAATT
GGCCGACATGGGGCTCAACACAGATCGAGCAGTTGCTGTCTGAGCAGCGA
GATCTGTATGCCTATCTACATGACCAGACCGTGCGGATGATGAATCAGGG
GCTCACAGGCATTGAGATCGCCGAGACCCTGACCCTCCCGCCGGCGCTGC
AGACTGCATGGCATGCGCAGGGGTTCTACGGGTCGATCAGTCACAACGTC
AAGGGGATTTACCAGCGGTACATGGGATGGTTCGACGGGAACCCAGCACA
TCTATGGGAATATCCGCCCGTCGAGAACGCAAAGCGCTACATTGCCTGTA
TGGGGGGCATTGACGAAGTGGTCCGCAAGGCAGAAGGTTTCGCGCAAGAC
GGAGATCTCCGTTTCGCCGCGACGCTGCTGGGACATGCAGTTGCATTTGA
TGCAAAGCATGAGCAGGCCAGACGCACGCTGGCATCGGTGTTCGAGCAGT
TAGGGTTCGGAGCGGAGAACGCGACCTGGCGGAATTTCTACCTCTCCGCG
GCGCGCGACTTGCGCGGGGAGCACCAGCCGCCAAATACAAATAAACTACC
GTCGAGGACCCAGAGTCGCCAATTGAACCCACGCCAGTCGGTGGAGCAGT
GGCTAACTCTGCTGGCGGTCCGGCTGAATGGACCAGCCGCGGCGAGCGAG
GCATTTGCCCTCGATGTGCATGTGACAGATGAGAAGCAGTGGTGGAGACT
GATGGTTAGCAACGGTGTTTTAACTAGCAGGAAAACCTCCGATCGGACGG
CTATTCAAGGCAAGACAACTTTTACAATGTCTCTTACGAAGCAGCGACTG
TGCGAAATCCTGAGCGGCAATGCAGATCTTGGCGACGTCGAACAGGAGGG
CGATGAAGCATGGCTCCACCGATTTCTGTCTTTGACAGCGTGATCCGGCA
GTTAAGCTGCCCGGCCTATCAAACAGAAACCCCTTGGATAAATCATCATC
CAGGCTCAAAAGGTCTGCTCAAAGGGCTTGCTGTTTGTGGTGGACCAATT
GTTTTCGTTTCACCATCCCGTGTCTGAGAAAGCCCTAAGCAAGTCGTCGC
AAGCGAAGAGAAAAAAACTGAGCCGCTAAGAGTCGCGAGGCGAAAACGTT
GAGAACGTGGAAAGTGTTGAAGTTTAAATTTGTTCCAGAACAGACTAAGC
GCCGAACCATCGGCCGAAGAAATGAAACTAGACTTTAGTCGGCGAGGGAT
CAACTCGTGGAGATTGACGGTGCATCTGCATTTTGCAGATGTCAGGGAGG
GAAGTCCTCCGGTGATCTTACGACGGCGTGGATGTTTATCTTGATCGTAG
AGGCTGATAATCAATGTTCAATAAACACCTTCC
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Coding sequence (CDS) from alignment at ch1:3538211..3540593+

>KJC3_001369-T1 ID=KJC3_001369-T1|Name=KJC3_001369-T1|organism=Aspergillus niger KJC3|type=CDS|length=1833bp|location=Sequence derived from alignment at ch1:3538211..3540593+ (Aspergillus niger KJC3)
ATGACACCTGCACAGCTACACCCAAGCTTCTCAGATCGAACCGATTTCGA
GAACGCCTCTCGAGGCTGGATTGGGTCTCTCGAGCCCGGCATCATCCGAG
CAGCCGATGGCCAACCCGTCTACAACAACGACGCCTACCACTTCCTGCAG
GGATCAGAATGTCCCAAAACAGCAAACCCAAAGCTATGGAGACAGGGCCA
ATTGGCATCCATGCAGGGACTCTTCCAGGTCGTCCCGGGGATCTACCAGA
TCCGCGGCCTGGACCTCGCCAACATGACCGTGGTCGAAGGCACCGAGGGA
CTCATCGTCATTGATCCTCTAACTTCCGTGGAATGCGCTGCTGCTGCCCT
GGCACTGTATAGGAAGCACCGTGGCAATAGACCCGTTACGGGGGTAATCT
ACTCTCATTCCCATATAGACCACTTTGGCGGAGCGCAGGGTGTGCTTCCT
GCCTCTGACGCAGTCCGAACGAGCCCCATCCCGATTGTCGCGCCAGAGGG
GTTCGTAGAAGAAGCCCTGAGTGAGAATATGTACGTTGGTCCGGCTATGC
GTCGTCGCGCGCAATACATGTACGGAGCCCAGTTACCCAAGGCTGCGGAC
GGTCAGATTGGCTGCGGCATCGGCATGACCGTGTCGATGGGAACAAACTC
GTTCGTGCCTCCAAACACTATTGTCACCTCGACTGGCGAAGAACGAATCA
TAGATGGCGTCCGCATACAATTCCAACTCGTGCCCGAGACGGAAGCGCCA
GCGGAGATGAACTTTTATTTCCCTGATCACCGCGCGCTGTATATTGCCGA
GTGTGCAACGCACAGTCTGCATAACATCATCACGCTGCGCGGGGCTCTGG
TGCGCGATGCGAAAGCCTGGGCACGGTATTTGGATGAGTCGCTGGTCCTA
TTTGGCCAGGAGTCAGATGTGTTATTTGCGGGCCATAATTGGCCGACATG
GGGCTCAACACAGATCGAGCAGTTGCTGTCTGAGCAGCGAGATCTGTATG
CCTATCTACATGACCAGACCGTGCGGATGATGAATCAGGGGCTCACAGGC
ATTGAGATCGCCGAGACCCTGACCCTCCCGCCGGCGCTGCAGACTGCATG
GCATGCGCAGGGGTTCTACGGGTCGATCAGTCACAACGTCAAGGGGATTT
ACCAGCGGTACATGGGATGGTTCGACGGGAACCCAGCACATCTATGGGAA
TATCCGCCCGTCGAGAACGCAAAGCGCTACATTGCCTGTATGGGGGGCAT
TGACGAAGTGGTCCGCAAGGCAGAAGGTTTCGCGCAAGACGGAGATCTCC
GTTTCGCCGCGACGCTGCTGGGACATGCAGTTGCATTTGATGCAAAGCAT
GAGCAGGCCAGACGCACGCTGGCATCGGTGTTCGAGCAGTTAGGGTTCGG
AGCGGAGAACGCGACCTGGCGGAATTTCTACCTCTCCGCGGCGCGCGACT
TGCGCGGGGAGCACCAGCCGCCAAATACAAATAAACTACCGTCGAGGACC
CAGAGTCGCCAATTGAACCCACGCCAGTCGGTGGAGCAGTGGCTAACTCT
GCTGGCGGTCCGGCTGAATGGACCAGCCGCGGCGAGCGAGGCATTTGCCC
TCGATGTGCATGTGACAGATGAGAAGCAGTGGTGGAGACTGATGGTTAGC
AACGGTGTTTTAACTAGCAGGAAAACCTCCGATCGGACGGCTATTCAAGG
CAAGACAACTTTTACAATGTCTCTTACGAAGCAGCGACTGTGCGAAATCC
TGAGCGGCAATGCAGATCTTGGCGACGTCGAACAGGAGGGCGATGAAGCA
TGGCTCCACCGATTTCTGTCTTTGACAGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001369KJC3_001369Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001369-T1.utr5p1KJC3_001369-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001369-T1.exon1KJC3_001369-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001369-T1.cdsKJC3_001369-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001369-T1.utr3p1KJC3_001369-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001369-T1KJC3_001369-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036866
DBxrefInterPro:IPR029229
DBxrefInterPro:IPR029228
DBxrefInterPro:IPR036527
DBxrefInterPro:IPR038536
DBxrefInterPro:IPR001279
DBxrefPFAM:PF00753
DBxrefPFAM:PF14863
DBxrefPFAM:PF14864
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3538211..3540593 +
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