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KJC3_001375-T1, KJC3_001375-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001375-T1
Unique NameKJC3_001375-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3548259..3550158-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001375-T1 ID=KJC3_001375-T1|Name=KJC3_001375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1900bp|location=Sequence derived from alignment at ch1:3548259..3550158- (Aspergillus niger KJC3)
GCACAATCTATCGGCGACCGGCTATGCTGGATATAAACTCTTGACTACCC
CTCCTCTCTTCAACGCTTCAAAAAGCCACGCTGTTATCCTTTCCTTCCAA
GCCCCGCCATTTTATCAATGTTAAATCAGTGAATCTATCGCAACATGGGA
AACCACATCTCCTACCAAACATCCGAGTGTCAGATTCAGTTGCCGGGAAC
GACTGGCTCTGTCAAAGGTTTGCAGAATGGCACCCAATCGAGACGCTTCG
CCGGCATTCCATACGCACAACCCCCCGTCGGTGACTTGAGATGGCGTAAA
CCTCGACCCTACCCTTTGCAACAGCTCCCCGCAGGCCAGCCCGGGGATAC
CTACGATGCGACGCAATTTGGGCCGGTCTGCCCGCAGCCTATTTACTCCA
AGGCCGTCAGCTCCCATGGTGGGCCTAAACACACCTACCATGAGGATTGT
TTGCGCCTCAATATCTGGACACCCGTTCCTGACCCCCAAGTATGCAATCC
CAAGTGGCCTGTCGTCATCTGGTTTCATGGGGGCTGGTTCCAGATTGGCG
ACCCCAGCCAAGAGCCGGGAATGGACCCCACCGAACTCATTTCCACTGCA
AAGTTGAATGCCATCTTCATTGCAGTGGGCTACCGATTGAATGTCTTCGG
ATTCTTGGCGGGCGAGGCGCTGCGGGAGGAGTCGGCTGGCCAAGAAGTCG
GCAACTATGGCCTTTGGGACCAGCGACTCGCCCTGGAATGGGTGTACCAG
AATATTGCTGCATTTGGGGGCGACCCAGAGAACATCACAATCTCGGGTCG
CAGTGCTGGCGCTTACGCGGTTCAAGCTCAGGTTCTCTATGACTTCCGGG
GTGAGATGGAGGACGCCATGCGCAACAAATTCCGCAGACTGTACATGCAT
TCTAACGCGATTCCATCCCAGCCCAAGACTGTAGAAGATTGCCAGCCACA
GTTCGATGAATTGTGTCAGCACTTTGACATTCCAGAAGACTTGACAGGGG
CAGAGAAGTTGGAGAAGCTGCGAGCCATAAGTGCACCGGACCTATGTGAT
GCGATCATGAAACTCAAACACCACACTTTCCGACCGGTCACCGATGGTGT
CTTCATCCAGCCAGGCGTCTTTGACTACTATCGCAATGGATCTTTCGCCG
CCGAGTTCAAGAAACGCGGCCTGCGGTTGTTCATTGGGGAAGTCCGGGAC
GAAAACACACTGTATGCCGTGACGAATGGTCCGGAGGCCAATGTGGAGTC
TATGAAACTGCAAGTATCGAACTACTATTCTCCTGCCACGACGGACCGTC
TACTACGGCATTACGCCCTACCAGATTCCACAGACAAGCAGGAATGGCAA
TCTGTCTTCGGACAGATTATCGCCGACGGGCAGGTTCGAGCGCCATACCG
GTTTTTGGTGAACAATCTCCTAGAGCACGGGGTGGAGCTCAAGGATGTCT
GGCGGTATCTGATCGCTTACCGAATGTCATTCATCACTGAAAAGGTGGCG
CCAGCATCCTTCGGGGTCAGTCACAGCATGGACAGACCGATATGGAAGTA
AGCAAACCTGCGTCACCCTAGCTAGAGACAGTACTGACAGCATCCAGTTA
CTCCATCATGCATGGACCCAGCCCGGCAGAGCGCATTTTGATGGATGACT
GGATCCGAGATCTAGTGGCCTTTGTGAATGACCAGCCTGATTACGAGTAT
GGCACACGGTCGGCAGATGAGTACAAGGTGATGACCCCAGAGGGCACAAT
TGAGGTTCAAAAGGACGGCCGATGGGATAGTCTTTTGCAGTTGATGGATG
TGTTTTCGGGTCGTTCGGAGGCTTGACAGGGCATAACTGGGGGTGGAGAG
AGCACGTAGACTTTTTCATGAAACAAAAATTCAAGGAAGCAAGATTCAAC
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Coding sequence (CDS) from alignment at ch1:3548259..3550158-

>KJC3_001375-T1 ID=KJC3_001375-T1|Name=KJC3_001375-T1|organism=Aspergillus niger KJC3|type=CDS|length=3264bp|location=Sequence derived from alignment at ch1:3548259..3550158- (Aspergillus niger KJC3)
TTACTCCATCATGCATGGACCCAGCCCGGCAGAGCGCATTTTGATGGATG
ACTGGATCCGAGATCTAGTGGCCTTTGTGAATGACCAGCCTGATTACGAG
TATGGCACACGGTCGGCAGATGAGTACAAGGTGATGACCCCAGAGGGCAC
AATTGAGGTTCAAAAGGACGGCCGATGGGATAGTCTTTTGCAGTTGATGG
ATGTGTTTTCGGGTCGTTCGGAGGCTTGAATGGGAAACCACATCTCCTAC
CAAACATCCGAGTGTCAGATTCAGTTGCCGGGAACGACTGGCTCTGTCAA
AGGTTTGCAGAATGGCACCCAATCGAGACGCTTCGCCGGCATTCCATACG
CACAACCCCCCGTCGGTGACTTGAGATGGCGTAAACCTCGACCCTACCCT
TTGCAACAGCTCCCCGCAGGCCAGCCCGGGGATACCTACGATGCGACGCA
ATTTGGGCCGGTCTGCCCGCAGCCTATTTACTCCAAGGCCGTCAGCTCCC
ATGGTGGGCCTAAACACACCTACCATGAGGATTGTTTGCGCCTCAATATC
TGGACACCCGTTCCTGACCCCCAAGTATGCAATCCCAAGTGGCCTGTCGT
CATCTGGTTTCATGGGGGCTGGTTCCAGATTGGCGACCCCAGCCAAGAGC
CGGGAATGGACCCCACCGAACTCATTTCCACTGCAAAGTTGAATGCCATC
TTCATTGCAGTGGGCTACCGATTGAATGTCTTCGGATTCTTGGCGGGCGA
GGCGCTGCGGGAGGAGTCGGCTGGCCAAGAAGTCGGCAACTATGGCCTTT
GGGACCAGCGACTCGCCCTGGAATGGGTGTACCAGAATATTGCTGCATTT
GGGGGCGACCCAGAGAACATCACAATCTCGGGTCGCAGTGCTGGCGCTTA
CGCGGTTCAAGCTCAGGTTCTCTATGACTTCCGGGGTGAGATGGAGGACG
CCATGCGCAACAAATTCCGCAGACTGTACATGCATTCTAACGCGATTCCA
TCCCAGCCCAAGACTGTAGAAGATTGCCAGCCACAGTTCGATGAATTGTG
TCAGCACTTTGACATTCCAGAAGACTTGACAGGGGCAGAGAAGTTGGAGA
AGCTGCGAGCCATAAGTGCACCGGACCTATGTGATGCGATCATGAAACTC
AAACACCACACTTTCCGACCGGTCACCGATGGTGTCTTCATCCAGCCAGG
CGTCTTTGACTACTATCGCAATGGATCTTTCGCCGCCGAGTTCAAGAAAC
GCGGCCTGCGGTTGTTCATTGGGGAAGTCCGGGACGAAAACACACTGTAT
GCCGTGACGAATGGTCCGGAGGCCAATGTGGAGTCTATGAAACTGCAAGT
ATCGAACTACTATTCTCCTGCCACGACGGACCGTCTACTACGGCATTACG
CCCTACCAGATTCCACAGACAAGCAGGAATGGCAATCTGTCTTCGGACAG
ATTATCGCCGACGGGCAGGTTCGAGCGCCATACCGGTTTTTGGTGAACAA
TCTCCTAGAGCACGGGGTGGAGCTCAAGGATGTCTGGCGGTATCTGATCG
CTTACCGAATGTCATTCATCACTGAAAAGGTGGCGCCAGCATCCTTCGGG
GTCAGTCACAGCATGGACAGACCGATATGGAATTACTCCATCATGCATGG
ACCCAGCCCGGCAGAGCGCATTTTGATGGATGACTGGATCCGAGATCTAG
TGGCCTTTGTGAATGACCAGCCTGATTACGAGTATGGCACACGGTCGGCA
GATGAGTACAAGGTGATGACCCCAGAGGGCACAATTGAGGTTCAAAAGGA
CGGCCGATGGGATAGTCTTTTGCAGTTGATGGATGTGTTTTCGGGTCGTT
CGGAGGCTTGAATGGGAAACCACATCTCCTACCAAACATCCGAGTGTCAG
ATTCAGTTGCCGGGAACGACTGGCTCTGTCAAAGGTTTGCAGAATGGCAC
CCAATCGAGACGCTTCGCCGGCATTCCATACGCACAACCCCCCGTCGGTG
ACTTGAGATGGCGTAAACCTCGACCCTACCCTTTGCAACAGCTCCCCGCA
GGCCAGCCCGGGGATACCTACGATGCGACGCAATTTGGGCCGGTCTGCCC
GCAGCCTATTTACTCCAAGGCCGTCAGCTCCCATGGTGGGCCTAAACACA
CCTACCATGAGGATTGTTTGCGCCTCAATATCTGGACACCCGTTCCTGAC
CCCCAAGTATGCAATCCCAAGTGGCCTGTCGTCATCTGGTTTCATGGGGG
CTGGTTCCAGATTGGCGACCCCAGCCAAGAGCCGGGAATGGACCCCACCG
AACTCATTTCCACTGCAAAGTTGAATGCCATCTTCATTGCAGTGGGCTAC
CGATTGAATGTCTTCGGATTCTTGGCGGGCGAGGCGCTGCGGGAGGAGTC
GGCTGGCCAAGAAGTCGGCAACTATGGCCTTTGGGACCAGCGACTCGCCC
TGGAATGGGTGTACCAGAATATTGCTGCATTTGGGGGCGACCCAGAGAAC
ATCACAATCTCGGGTCGCAGTGCTGGCGCTTACGCGGTTCAAGCTCAGGT
TCTCTATGACTTCCGGGGTGAGATGGAGGACGCCATGCGCAACAAATTCC
GCAGACTGTACATGCATTCTAACGCGATTCCATCCCAGCCCAAGACTGTA
GAAGATTGCCAGCCACAGTTCGATGAATTGTGTCAGCACTTTGACATTCC
AGAAGACTTGACAGGGGCAGAGAAGTTGGAGAAGCTGCGAGCCATAAGTG
CACCGGACCTATGTGATGCGATCATGAAACTCAAACACCACACTTTCCGA
CCGGTCACCGATGGTGTCTTCATCCAGCCAGGCGTCTTTGACTACTATCG
CAATGGATCTTTCGCCGCCGAGTTCAAGAAACGCGGCCTGCGGTTGTTCA
TTGGGGAAGTCCGGGACGAAAACACACTGTATGCCGTGACGAATGGTCCG
GAGGCCAATGTGGAGTCTATGAAACTGCAAGTATCGAACTACTATTCTCC
TGCCACGACGGACCGTCTACTACGGCATTACGCCCTACCAGATTCCACAG
ACAAGCAGGAATGGCAATCTGTCTTCGGACAGATTATCGCCGACGGGCAG
GTTCGAGCGCCATACCGGTTTTTGGTGAACAATCTCCTAGAGCACGGGGT
GGAGCTCAAGGATGTCTGGCGGTATCTGATCGCTTACCGAATGTCATTCA
TCACTGAAAAGGTGGCGCCAGCATCCTTCGGGGTCAGTCACAGCATGGAC
AGACCGATATGGAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001375KJC3_001375Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001375-T1KJC3_001375-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001375-T1.cdsKJC3_001375-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001375-T1.utr3p1KJC3_001375-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001375-T1.exon2KJC3_001375-T1.exon2Aspergillus niger KJC3exon
KJC3_001375-T1.exon1KJC3_001375-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001375-T1.utr5p1KJC3_001375-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0034664
DBxrefInterPro:IPR019826
DBxrefInterPro:IPR002018
DBxrefInterPro:IPR029058
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3548259..3550158 -
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