You are here

Home

KJC3_001378-T1, KJC3_001378-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001378-T1
Unique NameKJC3_001378-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3553937..3554904-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001378-T1 ID=KJC3_001378-T1|Name=KJC3_001378-T1|organism=Aspergillus niger KJC3|type=mRNA|length=968bp|location=Sequence derived from alignment at ch1:3553937..3554904- (Aspergillus niger KJC3)
CAATATCAATCAAATTCAACCTCATCGGTAAATCAACGATTCTACTATAA
TACTTCCACAATGGGTTCCACTCAGCCGCAATTCAAAAACCCTGCCACCA
CCTCCCTCCTGGAGCTGGTCAAGGCCCGCCGCACCTACTACGGCCTCAAG
GCCGAGAGCCCCATCTCCGACGATGCCATCGAGAGCATCGTCGCTGATGC
CGTCCTGCACGTGCCCAGCTCCTTCAACACTCAGACCTCCCGCGTCGTCC
TGCTGCTGAAGGAGGAGCACCAGAAGGTCTGGGACATCGCCATCGCTGCC
ATGGAGGGTCTGGTTGCCGCTGGCCACCTCCCCAAGGAGAACTTTGAGAA
CCAGACCAAGCCCAAGCTGGAAGCCTTCCGCGCGGGCTACGGAACGGTCT
GTTTGCCCTTATAATCTGGCTTGACCGACATATCCAGCTAACCCAACATT
AGGTCCTTTTCTTCGTCGATTATGACTCCCTCGCCGGTATCAAGGAGAAG
TTCGCCATCTACGCCGACAAGTTTGACCCCTTTGCCCTGGAGTCCAATGC
CATGTCCCAGTACCTTGGTAAGTCATCGACCCTCTTTCACAATTATCATC
GGTCCATGACGGGCTTTACCATGTGTCATCAACAGTCGCTGACTCCCTTC
CCAGTCTGGACCGCTCTGGAGTCCGAGGGCTTCGGTGCCAACCTGCAGCA
CTACAGCCCGCTCGTTGACGAGCAGATCCAGAAGCAATGGAACCTGCCGG
CCTCTTGGAAGCTCGACGCTCAGCTGGTCTTTGGCGTCCCTACCTCGGAG
CCTGGCGAGAAGGCTTTCGCGCCCCTGGAGGACCGCTTCAAGGTCTTTGG
CAAATAGACGCATTACGATTGATGCAATTCTGGAGTTAGCGTGATAGATT
AGACTTGCGGAGTCTTGCATTGGAGGCATTTCCGTCGCTCGAATAGAACT
TTCCTAGTTTTCTTGCAA
back to top

Coding sequence (CDS) from alignment at ch1:3553937..3554904-

>KJC3_001378-T1 ID=KJC3_001378-T1|Name=KJC3_001378-T1|organism=Aspergillus niger KJC3|type=CDS|length=1962bp|location=Sequence derived from alignment at ch1:3553937..3554904- (Aspergillus niger KJC3)
TCTGGACCGCTCTGGAGTCCGAGGGCTTCGGTGCCAACCTGCAGCACTAC
AGCCCGCTCGTTGACGAGCAGATCCAGAAGCAATGGAACCTGCCGGCCTC
TTGGAAGCTCGACGCTCAGCTGGTCTTTGGCGTCCCTACCTCGGAGCCTG
GCGAGAAGGCTTTCGCGCCCCTGGAGGACCGCTTCAAGGTCTTTGGCAAA
TAGGTCCTTTTCTTCGTCGATTATGACTCCCTCGCCGGTATCAAGGAGAA
GTTCGCCATCTACGCCGACAAGTTTGACCCCTTTGCCCTGGAGTCCAATG
CCATGTCCCAGTACCTTGATGGGTTCCACTCAGCCGCAATTCAAAAACCC
TGCCACCACCTCCCTCCTGGAGCTGGTCAAGGCCCGCCGCACCTACTACG
GCCTCAAGGCCGAGAGCCCCATCTCCGACGATGCCATCGAGAGCATCGTC
GCTGATGCCGTCCTGCACGTGCCCAGCTCCTTCAACACTCAGACCTCCCG
CGTCGTCCTGCTGCTGAAGGAGGAGCACCAGAAGGTCTGGGACATCGCCA
TCGCTGCCATGGAGGGTCTGGTTGCCGCTGGCCACCTCCCCAAGGAGAAC
TTTGAGAACCAGACCAAGCCCAAGCTGGAAGCCTTCCGCGCGGGCTACGG
AACGTCTGGACCGCTCTGGAGTCCGAGGGCTTCGGTGCCAACCTGCAGCA
CTACAGCCCGCTCGTTGACGAGCAGATCCAGAAGCAATGGAACCTGCCGG
CCTCTTGGAAGCTCGACGCTCAGCTGGTCTTTGGCGTCCCTACCTCGGAG
CCTGGCGAGAAGGCTTTCGCGCCCCTGGAGGACCGCTTCAAGGTCTTTGG
CAAATAGGTCCTTTTCTTCGTCGATTATGACTCCCTCGCCGGTATCAAGG
AGAAGTTCGCCATCTACGCCGACAAGTTTGACCCCTTTGCCCTGGAGTCC
AATGCCATGTCCCAGTACCTTGATGGGTTCCACTCAGCCGCAATTCAAAA
ACCCTGCCACCACCTCCCTCCTGGAGCTGGTCAAGGCCCGCCGCACCTAC
TACGGCCTCAAGGCCGAGAGCCCCATCTCCGACGATGCCATCGAGAGCAT
CGTCGCTGATGCCGTCCTGCACGTGCCCAGCTCCTTCAACACTCAGACCT
CCCGCGTCGTCCTGCTGCTGAAGGAGGAGCACCAGAAGGTCTGGGACATC
GCCATCGCTGCCATGGAGGGTCTGGTTGCCGCTGGCCACCTCCCCAAGGA
GAACTTTGAGAACCAGACCAAGCCCAAGCTGGAAGCCTTCCGCGCGGGCT
ACGGAACGTCTGGACCGCTCTGGAGTCCGAGGGCTTCGGTGCCAACCTGC
AGCACTACAGCCCGCTCGTTGACGAGCAGATCCAGAAGCAATGGAACCTG
CCGGCCTCTTGGAAGCTCGACGCTCAGCTGGTCTTTGGCGTCCCTACCTC
GGAGCCTGGCGAGAAGGCTTTCGCGCCCCTGGAGGACCGCTTCAAGGTCT
TTGGCAAATAGGTCCTTTTCTTCGTCGATTATGACTCCCTCGCCGGTATC
AAGGAGAAGTTCGCCATCTACGCCGACAAGTTTGACCCCTTTGCCCTGGA
GTCCAATGCCATGTCCCAGTACCTTGATGGGTTCCACTCAGCCGCAATTC
AAAAACCCTGCCACCACCTCCCTCCTGGAGCTGGTCAAGGCCCGCCGCAC
CTACTACGGCCTCAAGGCCGAGAGCCCCATCTCCGACGATGCCATCGAGA
GCATCGTCGCTGATGCCGTCCTGCACGTGCCCAGCTCCTTCAACACTCAG
ACCTCCCGCGTCGTCCTGCTGCTGAAGGAGGAGCACCAGAAGGTCTGGGA
CATCGCCATCGCTGCCATGGAGGGTCTGGTTGCCGCTGGCCACCTCCCCA
AGGAGAACTTTGAGAACCAGACCAAGCCCAAGCTGGAAGCCTTCCGCGCG
GGCTACGGAACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0034599cellular response to oxidative stress
Vocabulary: Molecular Function
TermDefinition
GO:0016657oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001378KJC3_001378Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001378-T1KJC3_001378-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001378-T1.cdsKJC3_001378-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001378-T1.utr3p1KJC3_001378-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001378-T1.exon3KJC3_001378-T1.exon3Aspergillus niger KJC3exon
KJC3_001378-T1.exon2KJC3_001378-T1.exon2Aspergillus niger KJC3exon
KJC3_001378-T1.exon1KJC3_001378-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001378-T1.utr5p1KJC3_001378-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033877
DBxrefInterPro:IPR000415
DBxrefInterPro:IPR029479
DBxrefPFAM:PF00881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3553937..3554904 -
Powered by Drupal