You are here

Home

KJC3_001382-T1, KJC3_001382-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001382-T1
Unique NameKJC3_001382-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3561310..3563218-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001382-T1 ID=KJC3_001382-T1|Name=KJC3_001382-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1909bp|location=Sequence derived from alignment at ch1:3561310..3563218- (Aspergillus niger KJC3)
ATGGATAACCCGAACCGTCTCGTTGTTGGATTGGACCATGGTACCAGCAA
AACGGGCAAGTGACGATCCTTCTTCGTTGGACTCGCCTTTGTTTCCCTTT
CACTTCTTCCCTCTTCCAAACTCGGGCGCTAATTGAAACATGCATTCTAG
CTCTGACGTACTGGGCGCAAAGCCGAGGGGAGGTTGTGGAGTGGCAGCCT
GTCAACCGCATTCCCATCACTCCGTCCGTCATGGCCTACCCCGACAATAG
GCCGCCCCTTTGGGGCAACGCCGCTAGAGAACATCGCGATCGAGTTTCCT
GGTCCAAATTACTGGTCGATGGCTCTCCGCCTGTATCAGTTAATGGACTG
GATCTCAGGGCTCTCCTCGGAGATAAAGGCTTCAACTATTACCAAGATCG
CACACGAATTACGCGCGTCATAACCGACTATCTAGAAAGGATCCGGTCGG
CTTTTTGCAATGATCCCCGCGTCCTGGAAGATGTGAGGGCTCTGAACCTA
CCATCCATTGCCTGGCACTTCTCAATGCCAGCCTGTTGGTCCAGAAATGG
AGTCCGCATGATGATGATTGCAGTGGAGAGGGCCGGATTTCTAGACAACG
GCGGTACCATTACTTACTGTTCGGAAGCGATGGCCGCTGCCATCGGGGTC
TCGTACAGACTCACCGACAACTCCGTCCGGGTAGGGGAGAAACTACTCGT
GTGTGACCTTGGGGGCGTCACTAATGTAAGGCGATTTGGACGTCCAGGTG
AATGGTTTAAATCTGCGCAGAAAGCTTACATAGAGCAGGATTTTACGACT
TTCAAAGTCACGGGGGTCGATCCAAATCATCCCCGACGATTGTCTTTTCA
ACAAATCGCCCAACATAGTACGGCCGATTGTACGAATCCGCACATCGAGA
ATGAGCTTTTGCAGCACATCCGGCAGGTGCTGGGTCTGCCGCTGAGATCT
GGGGATGTGGCTCGCCTAGCGGTTGAAGCTGCCAGGGCGGCGAAGGAAGG
GTACAATGGTCGTGACGACGTGGATGTCCGCCTCTCCCTTCGTCAGCGCT
ATCTCCAACAACATTACAACGGCAACTGCCGCTTTTTCGATCACGATGGC
GGACGGTTCACATTCAGCGCCAGTGTGCTTCAAGGGGCCATGGATCCGGT
TGTCACTAGCGTCATGCGCCGGATATTAGATCATGTTAAGACGTACGGCG
CCAACAGGATAGCCATTGTGGGTGGCTTAAGCCGTTCCCAGTACGCCCCC
AACCCTATGCAGTATAGGAGTCGATGGGGGTATGAAATTCACAGCAGCTT
CATCGAGCGGCTTGGGACCGAGGATCTGTACTCCGAATATCGTCCTACGA
CTGCTATTACCTTGGTACGGATCCTCTTTGATTGCCCTTATCAGAGACTG
CCATCCTGAGTCTGACACTCCGAACTTCTCTCTTCCAGGTTGAGGCACGG
GATAATGTGCCCCGACAAGGGCGAGTACGATTCCGGCTTAGTGTACGCAG
CCGACACCGCTCAGAGAACATAATGATTAAACGGCGTGATATGGCTGGCA
GTCAGTATACACTATCCTATACCGGTGCTTTACAATGGCTGCGGACTGAC
ACCACCCTTAGAGGCGGAAACCGTTACCTTGTGTCCGCACGAAATTGACG
ATAATACCCCCTACGTTGACGAGGCCGTGCACCGGGATCTAAATGTAACT
GTCCGCTACTATGAGATAGTTGCATCGTGGTCACTGGAGGCAGACGTCCA
CCTCACCATGGACTGGACATTCGAGGCGGAGGGCCCCCGCACCGGAGTGC
TGCACGAAGTAGCAAGGGCCAGCCATCCAGCGGATGAGATGATGCCCTGC
TGGGCCACGTGATATCTGTAGATAGATTCCTTTCTACTATCGAGAATCTT
TTCGACGTG
back to top

Coding sequence (CDS) from alignment at ch1:3561310..3563218-

>KJC3_001382-T1 ID=KJC3_001382-T1|Name=KJC3_001382-T1|organism=Aspergillus niger KJC3|type=CDS|length=7770bp|location=Sequence derived from alignment at ch1:3561310..3563218- (Aspergillus niger KJC3)
AGGCGGAAACCGTTACCTTGTGTCCGCACGAAATTGACGATAATACCCCC
TACGTTGACGAGGCCGTGCACCGGGATCTAAATGTAACTGTCCGCTACTA
TGAGATAGTTGCATCGTGGTCACTGGAGGCAGACGTCCACCTCACCATGG
ACTGGACATTCGAGGCGGAGGGCCCCCGCACCGGAGTGCTGCACGAAGTA
GCAAGGGCCAGCCATCCAGCGGATGAGATGATGCCCTGCTGGGCCACGTG
AGTTGAGGCACGGGATAATGTGCCCCGACAAGGGCGAGTACGATTCCGGC
TTAGTGTACGCAGCCGACACCGCTCAGAGAACATAATGATTAAACGGCGT
GATATGGCTGGCAGATTTTACGACTTTCAAAGTCACGGGGGTCGATCCAA
ATCATCCCCGACGATTGTCTTTTCAACAAATCGCCCAACATAGTACGGCC
GATTGTACGAATCCGCACATCGAGAATGAGCTTTTGCAGCACATCCGGCA
GGTGCTGGGTCTGCCGCTGAGATCTGGGGATGTGGCTCGCCTAGCGGTTG
AAGCTGCCAGGGCGGCGAAGGAAGGGTACAATGGTCGTGACGACGTGGAT
GTCCGCCTCTCCCTTCGTCAGCGCTATCTCCAACAACATTACAACGGCAA
CTGCCGCTTTTTCGATCACGATGGCGGACGGTTCACATTCAGCGCCAGTG
TGCTTCAAGGGGCCATGGATCCGGTTGTCACTAGCGTCATGCGCCGGATA
TTAGATCATGTTAAGACGTACGGCGCCAACAGGATAGCCATTGTGGGTGG
CTTAAGCCGTTCCCAGTACGCCCCCAACCCTATGCAGTATAGGAGTCGAT
GGGGGTATGAAATTCACAGCAGCTTCATCGAGCGGCTTGGGACCGAGGAT
CTGTACTCCGAATATCGTCCTACGACTGCTATTACCTTGCTCTGACGTAC
TGGGCGCAAAGCCGAGGGGAGGTTGTGGAGTGGCAGCCTGTCAACCGCAT
TCCCATCACTCCGTCCGTCATGGCCTACCCCGACAATAGGCCGCCCCTTT
GGGGCAACGCCGCTAGAGAACATCGCGATCGAGTTTCCTGGTCCAAATTA
CTGGTCGATGGCTCTCCGCCTGTATCAGTTAATGGACTGGATCTCAGGGC
TCTCCTCGGAGATAAAGGCTTCAACTATTACCAAGATCGCACACGAATTA
CGCGCGTCATAACCGACTATCTAGAAAGGATCCGGTCGGCTTTTTGCAAT
GATCCCCGCGTCCTGGAAGATGTGAGGGCTCTGAACCTACCATCCATTGC
CTGGCACTTCTCAATGCCAGCCTGTTGGTCCAGAAATGGAGTCCGCATGA
TGATGATTGCAGTGGAGAGGGCCGGATTTCTAGACAACGGCGGTACCATT
ACTTACTGTTCGGAAGCGATGGCCGCTGCCATCGGGGTCTCGTACAGACT
CACCGACAACTCCGTCCGGGTAGGGGAGAAACTACTCGTGTGTGACCTTG
GGGGCGTCACTAATATGGATAACCCGAACCGTCTCGTTGTTGGATTGGAC
CATGAGGCGGAAACCGTTACCTTGTGTCCGCACGAAATTGACGATAATAC
CCCCTACGTTGACGAGGCCGTGCACCGGGATCTAAATGTAACTGTCCGCT
ACTATGAGATAGTTGCATCGTGGTCACTGGAGGCAGACGTCCACCTCACC
ATGGACTGGACATTCGAGGCGGAGGGCCCCCGCACCGGAGTGCTGCACGA
AGTAGCAAGGGCCAGCCATCCAGCGGATGAGATGATGCCCTGCTGGGCCA
CGTGAGTTGAGGCACGGGATAATGTGCCCCGACAAGGGCGAGTACGATTC
CGGCTTAGTGTACGCAGCCGACACCGCTCAGAGAACATAATGATTAAACG
GCGTGATATGGCTGGCAGATTTTACGACTTTCAAAGTCACGGGGGTCGAT
CCAAATCATCCCCGACGATTGTCTTTTCAACAAATCGCCCAACATAGTAC
GGCCGATTGTACGAATCCGCACATCGAGAATGAGCTTTTGCAGCACATCC
GGCAGGTGCTGGGTCTGCCGCTGAGATCTGGGGATGTGGCTCGCCTAGCG
GTTGAAGCTGCCAGGGCGGCGAAGGAAGGGTACAATGGTCGTGACGACGT
GGATGTCCGCCTCTCCCTTCGTCAGCGCTATCTCCAACAACATTACAACG
GCAACTGCCGCTTTTTCGATCACGATGGCGGACGGTTCACATTCAGCGCC
AGTGTGCTTCAAGGGGCCATGGATCCGGTTGTCACTAGCGTCATGCGCCG
GATATTAGATCATGTTAAGACGTACGGCGCCAACAGGATAGCCATTGTGG
GTGGCTTAAGCCGTTCCCAGTACGCCCCCAACCCTATGCAGTATAGGAGT
CGATGGGGGTATGAAATTCACAGCAGCTTCATCGAGCGGCTTGGGACCGA
GGATCTGTACTCCGAATATCGTCCTACGACTGCTATTACCTTGCTCTGAC
GTACTGGGCGCAAAGCCGAGGGGAGGTTGTGGAGTGGCAGCCTGTCAACC
GCATTCCCATCACTCCGTCCGTCATGGCCTACCCCGACAATAGGCCGCCC
CTTTGGGGCAACGCCGCTAGAGAACATCGCGATCGAGTTTCCTGGTCCAA
ATTACTGGTCGATGGCTCTCCGCCTGTATCAGTTAATGGACTGGATCTCA
GGGCTCTCCTCGGAGATAAAGGCTTCAACTATTACCAAGATCGCACACGA
ATTACGCGCGTCATAACCGACTATCTAGAAAGGATCCGGTCGGCTTTTTG
CAATGATCCCCGCGTCCTGGAAGATGTGAGGGCTCTGAACCTACCATCCA
TTGCCTGGCACTTCTCAATGCCAGCCTGTTGGTCCAGAAATGGAGTCCGC
ATGATGATGATTGCAGTGGAGAGGGCCGGATTTCTAGACAACGGCGGTAC
CATTACTTACTGTTCGGAAGCGATGGCCGCTGCCATCGGGGTCTCGTACA
GACTCACCGACAACTCCGTCCGGGTAGGGGAGAAACTACTCGTGTGTGAC
CTTGGGGGCGTCACTAATATGGATAACCCGAACCGTCTCGTTGTTGGATT
GGACCATGAGGCGGAAACCGTTACCTTGTGTCCGCACGAAATTGACGATA
ATACCCCCTACGTTGACGAGGCCGTGCACCGGGATCTAAATGTAACTGTC
CGCTACTATGAGATAGTTGCATCGTGGTCACTGGAGGCAGACGTCCACCT
CACCATGGACTGGACATTCGAGGCGGAGGGCCCCCGCACCGGAGTGCTGC
ACGAAGTAGCAAGGGCCAGCCATCCAGCGGATGAGATGATGCCCTGCTGG
GCCACGTGAGTTGAGGCACGGGATAATGTGCCCCGACAAGGGCGAGTACG
ATTCCGGCTTAGTGTACGCAGCCGACACCGCTCAGAGAACATAATGATTA
AACGGCGTGATATGGCTGGCAGATTTTACGACTTTCAAAGTCACGGGGGT
CGATCCAAATCATCCCCGACGATTGTCTTTTCAACAAATCGCCCAACATA
GTACGGCCGATTGTACGAATCCGCACATCGAGAATGAGCTTTTGCAGCAC
ATCCGGCAGGTGCTGGGTCTGCCGCTGAGATCTGGGGATGTGGCTCGCCT
AGCGGTTGAAGCTGCCAGGGCGGCGAAGGAAGGGTACAATGGTCGTGACG
ACGTGGATGTCCGCCTCTCCCTTCGTCAGCGCTATCTCCAACAACATTAC
AACGGCAACTGCCGCTTTTTCGATCACGATGGCGGACGGTTCACATTCAG
CGCCAGTGTGCTTCAAGGGGCCATGGATCCGGTTGTCACTAGCGTCATGC
GCCGGATATTAGATCATGTTAAGACGTACGGCGCCAACAGGATAGCCATT
GTGGGTGGCTTAAGCCGTTCCCAGTACGCCCCCAACCCTATGCAGTATAG
GAGTCGATGGGGGTATGAAATTCACAGCAGCTTCATCGAGCGGCTTGGGA
CCGAGGATCTGTACTCCGAATATCGTCCTACGACTGCTATTACCTTGCTC
TGACGTACTGGGCGCAAAGCCGAGGGGAGGTTGTGGAGTGGCAGCCTGTC
AACCGCATTCCCATCACTCCGTCCGTCATGGCCTACCCCGACAATAGGCC
GCCCCTTTGGGGCAACGCCGCTAGAGAACATCGCGATCGAGTTTCCTGGT
CCAAATTACTGGTCGATGGCTCTCCGCCTGTATCAGTTAATGGACTGGAT
CTCAGGGCTCTCCTCGGAGATAAAGGCTTCAACTATTACCAAGATCGCAC
ACGAATTACGCGCGTCATAACCGACTATCTAGAAAGGATCCGGTCGGCTT
TTTGCAATGATCCCCGCGTCCTGGAAGATGTGAGGGCTCTGAACCTACCA
TCCATTGCCTGGCACTTCTCAATGCCAGCCTGTTGGTCCAGAAATGGAGT
CCGCATGATGATGATTGCAGTGGAGAGGGCCGGATTTCTAGACAACGGCG
GTACCATTACTTACTGTTCGGAAGCGATGGCCGCTGCCATCGGGGTCTCG
TACAGACTCACCGACAACTCCGTCCGGGTAGGGGAGAAACTACTCGTGTG
TGACCTTGGGGGCGTCACTAATATGGATAACCCGAACCGTCTCGTTGTTG
GATTGGACCATGAGGCGGAAACCGTTACCTTGTGTCCGCACGAAATTGAC
GATAATACCCCCTACGTTGACGAGGCCGTGCACCGGGATCTAAATGTAAC
TGTCCGCTACTATGAGATAGTTGCATCGTGGTCACTGGAGGCAGACGTCC
ACCTCACCATGGACTGGACATTCGAGGCGGAGGGCCCCCGCACCGGAGTG
CTGCACGAAGTAGCAAGGGCCAGCCATCCAGCGGATGAGATGATGCCCTG
CTGGGCCACGTGAGTTGAGGCACGGGATAATGTGCCCCGACAAGGGCGAG
TACGATTCCGGCTTAGTGTACGCAGCCGACACCGCTCAGAGAACATAATG
ATTAAACGGCGTGATATGGCTGGCAGATTTTACGACTTTCAAAGTCACGG
GGGTCGATCCAAATCATCCCCGACGATTGTCTTTTCAACAAATCGCCCAA
CATAGTACGGCCGATTGTACGAATCCGCACATCGAGAATGAGCTTTTGCA
GCACATCCGGCAGGTGCTGGGTCTGCCGCTGAGATCTGGGGATGTGGCTC
GCCTAGCGGTTGAAGCTGCCAGGGCGGCGAAGGAAGGGTACAATGGTCGT
GACGACGTGGATGTCCGCCTCTCCCTTCGTCAGCGCTATCTCCAACAACA
TTACAACGGCAACTGCCGCTTTTTCGATCACGATGGCGGACGGTTCACAT
TCAGCGCCAGTGTGCTTCAAGGGGCCATGGATCCGGTTGTCACTAGCGTC
ATGCGCCGGATATTAGATCATGTTAAGACGTACGGCGCCAACAGGATAGC
CATTGTGGGTGGCTTAAGCCGTTCCCAGTACGCCCCCAACCCTATGCAGT
ATAGGAGTCGATGGGGGTATGAAATTCACAGCAGCTTCATCGAGCGGCTT
GGGACCGAGGATCTGTACTCCGAATATCGTCCTACGACTGCTATTACCTT
GCTCTGACGTACTGGGCGCAAAGCCGAGGGGAGGTTGTGGAGTGGCAGCC
TGTCAACCGCATTCCCATCACTCCGTCCGTCATGGCCTACCCCGACAATA
GGCCGCCCCTTTGGGGCAACGCCGCTAGAGAACATCGCGATCGAGTTTCC
TGGTCCAAATTACTGGTCGATGGCTCTCCGCCTGTATCAGTTAATGGACT
GGATCTCAGGGCTCTCCTCGGAGATAAAGGCTTCAACTATTACCAAGATC
GCACACGAATTACGCGCGTCATAACCGACTATCTAGAAAGGATCCGGTCG
GCTTTTTGCAATGATCCCCGCGTCCTGGAAGATGTGAGGGCTCTGAACCT
ACCATCCATTGCCTGGCACTTCTCAATGCCAGCCTGTTGGTCCAGAAATG
GAGTCCGCATGATGATGATTGCAGTGGAGAGGGCCGGATTTCTAGACAAC
GGCGGTACCATTACTTACTGTTCGGAAGCGATGGCCGCTGCCATCGGGGT
CTCGTACAGACTCACCGACAACTCCGTCCGGGTAGGGGAGAAACTACTCG
TGTGTGACCTTGGGGGCGTCACTAATATGGATAACCCGAACCGTCTCGTT
GTTGGATTGGACCATGAGGCGGAAACCGTTACCTTGTGTCCGCACGAAAT
TGACGATAATACCCCCTACGTTGACGAGGCCGTGCACCGGGATCTAAATG
TAACTGTCCGCTACTATGAGATAGTTGCATCGTGGTCACTGGAGGCAGAC
GTCCACCTCACCATGGACTGGACATTCGAGGCGGAGGGCCCCCGCACCGG
AGTGCTGCACGAAGTAGCAAGGGCCAGCCATCCAGCGGATGAGATGATGC
CCTGCTGGGCCACGTGAGTTGAGGCACGGGATAATGTGCCCCGACAAGGG
CGAGTACGATTCCGGCTTAGTGTACGCAGCCGACACCGCTCAGAGAACAT
AATGATTAAACGGCGTGATATGGCTGGCAGATTTTACGACTTTCAAAGTC
ACGGGGGTCGATCCAAATCATCCCCGACGATTGTCTTTTCAACAAATCGC
CCAACATAGTACGGCCGATTGTACGAATCCGCACATCGAGAATGAGCTTT
TGCAGCACATCCGGCAGGTGCTGGGTCTGCCGCTGAGATCTGGGGATGTG
GCTCGCCTAGCGGTTGAAGCTGCCAGGGCGGCGAAGGAAGGGTACAATGG
TCGTGACGACGTGGATGTCCGCCTCTCCCTTCGTCAGCGCTATCTCCAAC
AACATTACAACGGCAACTGCCGCTTTTTCGATCACGATGGCGGACGGTTC
ACATTCAGCGCCAGTGTGCTTCAAGGGGCCATGGATCCGGTTGTCACTAG
CGTCATGCGCCGGATATTAGATCATGTTAAGACGTACGGCGCCAACAGGA
TAGCCATTGTGGGTGGCTTAAGCCGTTCCCAGTACGCCCCCAACCCTATG
CAGTATAGGAGTCGATGGGGGTATGAAATTCACAGCAGCTTCATCGAGCG
GCTTGGGACCGAGGATCTGTACTCCGAATATCGTCCTACGACTGCTATTA
CCTTGCTCTGACGTACTGGGCGCAAAGCCGAGGGGAGGTTGTGGAGTGGC
AGCCTGTCAACCGCATTCCCATCACTCCGTCCGTCATGGCCTACCCCGAC
AATAGGCCGCCCCTTTGGGGCAACGCCGCTAGAGAACATCGCGATCGAGT
TTCCTGGTCCAAATTACTGGTCGATGGCTCTCCGCCTGTATCAGTTAATG
GACTGGATCTCAGGGCTCTCCTCGGAGATAAAGGCTTCAACTATTACCAA
GATCGCACACGAATTACGCGCGTCATAACCGACTATCTAGAAAGGATCCG
GTCGGCTTTTTGCAATGATCCCCGCGTCCTGGAAGATGTGAGGGCTCTGA
ACCTACCATCCATTGCCTGGCACTTCTCAATGCCAGCCTGTTGGTCCAGA
AATGGAGTCCGCATGATGATGATTGCAGTGGAGAGGGCCGGATTTCTAGA
CAACGGCGGTACCATTACTTACTGTTCGGAAGCGATGGCCGCTGCCATCG
GGGTCTCGTACAGACTCACCGACAACTCCGTCCGGGTAGGGGAGAAACTA
CTCGTGTGTGACCTTGGGGGCGTCACTAATATGGATAACCCGAACCGTCT
CGTTGTTGGATTGGACCATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001382KJC3_001382Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001382-T1KJC3_001382-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001382-T1.cdsKJC3_001382-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001382-T1.utr3p1KJC3_001382-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001382-T1.exon5KJC3_001382-T1.exon5Aspergillus niger KJC3exon
KJC3_001382-T1.exon4KJC3_001382-T1.exon4Aspergillus niger KJC3exon
KJC3_001382-T1.exon3KJC3_001382-T1.exon3Aspergillus niger KJC3exon
KJC3_001382-T1.exon2KJC3_001382-T1.exon2Aspergillus niger KJC3exon
KJC3_001382-T1.exon1KJC3_001382-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR043129
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3561310..3563218 -
Powered by Drupal