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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3570557..3573280+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001385-T2 ID=KJC3_001385-T2|Name=KJC3_001385-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2724bp|location=Sequence derived from alignment at ch1:3570557..3573280+ (Aspergillus niger KJC3) AGCCTAAACCCGCAGCTTCTTAATGGTTTACTATAGATACGTACTAGAAT
ACTACGGAGTACTCATCTGCTAGTTACTCTGCTACTTTGCTGACTTACTA
GTCAAGCAAAGGCCAGCCCATCCTCCACCCTCCCGTCAGCCCGCCCATAA
TACGTATAGCCCTCCCCCGGTGTGTCTGCAGCCCTCCGCTGCCGTCAAAC
TTTCTATCTTTTTTTTTTTTCCCTTCCCTACTCTCTGCCTTCCTCTGATC
TCTCTCCTCTTCTTCCCTTTCTTCCCTTCTATTAGTATAGCGCCTCTTTC
TTCTTTCCGCCTGACAATTTACAACCACCTCTCCGCTCCGCTCCCTTCTT
CTCGCCATGGCTCCCACTACCCGGGATCTTGAGGCTCTCGCCGTCCACCA
CAACTCCGACATCATGGCTGATGATCTGGCCGAGAAGAAGGTCTCCGCTA
ATGAATCCCCCCCGGAAAACGACCCTTTTGGCAATGAGGAGTGTGGTGAG
GTCAAGTACCGTGTCATGAAATGGTGGCACTGTGGTATATGTAAGGTTCC
TCGGGGCTTCCCCCAACCCCAACCCCATCAAGGGTAAAGAATTACCATCT
AAACCGAAATGTGATAGTGATGATTGCGGAGAATATCTCCCTGGGAATTC
TGTCCTTGCCATCGGCCGTGGCGACTCTTGGAATCGTCCCGTAAGTGCTT
CTTCCACTGTCGAGTTTCACTTTATTCCGTACCTCTTTCTAACATACCCC
GGTTCAGCTCCATCTTCCTCATCCTGGGCTTGTCTGGCATTTCCTGGTAC
ACTGGTTATGTCATCGGCCAGTTTAAGCTGCGCTATCCCCAAGTCCACAG
CATGGGTGATGCGGGAGAAATCCTCTTTGGCCGCATCGGCCGCGAAATTC
TCTTCTTTGGCCAATTGCTGTTCTGTATCTTTTTGATGTCCAGCCACATT
CTCACCTTCACCGTGCTGTTCAACACCATTACCGGTCATGGCACCTGCAC
CATCGTCTTCGGCGTCGTCGGTTTGGTTGTCAGCTTCATCGGTGCTCTGC
CTCGCACCATGGGCAAGGTGTATTGGATGTCTCTCGCCTGTATGTCCACG
ATGTTCCTCATTGTTGTTTGGTTTTCAGACCAAGACTGACCACCGTCTTT
CATTTTCGCAACAACAGCTTGTACCAGTATCACCGTTGCCACGATCGTCA
CCATGGTGGCCATCGCTGTGCAAGCGCCCGATCACGTTCAGGTCGATATC
ACCACCCATCCTAGCTTCTCGACTGCTTTCCTGTCAGTGACCAACATCGT
CTTCGCCTTCAGTATGTCCCTCTTCGTCTTCCCTTCTTTTCTCAAAGCAT
CCTTCCTAACTCTTGTTCTGCAGTTGCTCACGTGGCCTTCTTCGGATTTG
CCTCGGAAATGGAGGATCCTCGCGACTTCCCCAAGTCGCTGGCCATGCTG
CAGGTCACGGATACAACCATGTACATCGTCACGGCCATGGTCATCTACCG
TTACGCTGGTCCTGATGTTGCTTCCCCGGCGCTGTCCTCTGCCGGTCCGC
TGATGAGCAAGGTTGCCTACGGCCTTGCCATTCCTACCGTGAGTGTCTCC
CCCCATGTCTTTGTTCGGTAAATTTTTCCATTTCGTATACTAATATATTG
GTTGCTCAGGTGATCATTGCCGGAGTTGTGTTCGGTCATGTCGCGTCCAA
GTACATCTACGTTCGTGTCTGGCGCGGCTCCCCCCAGATGCACACGAACA
GTCTTGCGGCTGTCGGATCGTGGGTCGCCATTGCACTGGGCGTGTGGGTA
ATTGCTTGGATCATTGCCGAGTCAATCCCCGTGTTCAACGATTTGTTGAG
TTTGATCGTATGCTTCCCTAGCCCCTGAGACATGCGGTAGACTTGTTATT
ACTAACGGGTGTTGTGATTGCAGAGTTCTCTCTTCGGTAGTTGGTTCAGT
TGTAAGTCCACCCTCTTTACTCTTTATTTTGGACCCCAGGCTTACCCTTC
CATTTCAGACGGACTCCCTGCCATGTTCTGGTTGGTCATGAACCGTGGCC
AGTACACTGCCTCGCCCAGAAAGATCTTCCTGACCATTGTCAACCTGGTC
ATCTTCGGCATTGCCTGCGCCATTGTATGTTGTCAACTTATCCATCCCCG
TTCTGCAATTGCGCATTGACACTAACCTGACCAGTGCGGCTTGGGTCTCT
ACGTCTCTGGCAAGGCCATCCACGACAGCTCTTCCTCGGCCAGCTGGACG
TGCGCCAACAATGCCTCCACTTAAGGGTGGATCGAGTCCTTCCGAGCGAA
GTCTTCACAGGGTCCACCTCGGCCTCTCTGCTAACCTCCCAGATCGAGCT
GGGCTGTTCTGGGGTATTCAACGCATTGGTGTTCGTATAGGTGTTTGATG
GGTCATTTTCGATGAGTTCCGAGAAATGGTTTTTCATGTCATGTTTATGT
TTTGTGTCTATGGTTTTGTTTTTCCCCCACTAGCCGGCATCCACTCGCAC
CTATTACCTGTTTGTTCATTGCATGTCATTATCATCCCCCTTGTGTACAG
AATGTATATACTACCTCTGCTGCTGCTATTACTACTACTACAACATGACG
ATGACTACTACTCTATCCTGGTTGGTCCACTCGCTTGCGGTTGTTTCTGC
CGGGTGGACATGGATGCAGAGATCCTCTTCGGTACATTGCATCGCATCAT
GAAGATTTTGGTCTTGCATTTGGG back to topCoding sequence (CDS) from alignment at ch1:3570557..3573280+ >KJC3_001385-T2 ID=KJC3_001385-T2|Name=KJC3_001385-T2|organism=Aspergillus niger KJC3|type=CDS|length=7002bp|location=Sequence derived from alignment at ch1:3570557..3573280+ (Aspergillus niger KJC3) ATGGCTCCCACTACCCGGGATCTTGAGGCTCTCGCCGTCCACCACAACTC CGACATCATGGCTGATGATCTGGCCGAGAAGAAGGTCTCCGCTAATGAAT CCCCCCCGGAAAACGACCCTTTTGGCAATGAGGAGTGTGGTGAGGTCAAG TACCGTGTCATGAAATGGTGGCACTGTGGTATATTGATGATTGCGGAGAA TATCTCCCTGGGAATTCTGTCCTTGCCATCGGCCGTGGCGACTCTTGGAA TCGTCCCCTCCATCTTCCTCATCCTGGGCTTGTCTGGCATTTCCTGGTAC ACTGGTTATGTCATCGGCCAGTTTAAGCTGCGCTATCCCCAAGTCCACAG CATGGGTGATGCGGGAGAAATCCTCTTTGGCCGCATCGGCCGCGAAATTC TCTTCTTTGGCCAATTGCTGTTCTGTATCTTTTTGATGTCCAGCCACATT CTCACCTTCACCGTGCTGTTCAACACCATTACCGGTCATGGCACCTGCAC CATCGTCTTCGGCGTCGTCGGTTTGGTTGTCAGCTTCATCGGTGCTCTGC CTCGCACCATGGGCAAGGTGTATTGGATGTCTCTCGCCTCTTGTACCAGT ATCACCGTTGCCACGATCGTCACCATGGTGGCCATCGCTGTGCAAGCGCC CGATCACGTTCAGGTCGATATCACCACCCATCCTAGCTTCTCGACTGCTT TCCTGTCAGTGACCAACATCGTCTTCGCCTTCATTGCTCACGTGGCCTTC TTCGGATTTGCCTCGGAAATGGAGGATCCTCGCGACTTCCCCAAGTCGCT GGCCATGCTGCAGGTCACGGATACAACCATGTACATCGTCACGGCCATGG TCATCTACCGTTACGCTGGTCCTGATGTTGCTTCCCCGGCGCTGTCCTCT GCCGGTCCGCTGATGAGCAAGGTTGCCTACGGCCTTGCCATTCCTACCGT GATCATTGCCGGAGTTGTGTTCGGTCATGTCGCGTCCAAGTACATCTACG TTCGTGTCTGGCGCGGCTCCCCCCAGATGCACACGAACAGTCTTGCGGCT GTCGGATCGTGGGTCGCCATTGCACTGGGCGTGTGGGTAATTGCTTGGAT CATTGCCGAGTCAATCCCCGTGTTCAACGATTTGTTGAGTTTGATCGTAT GCTTCCCTAGCCCCTGAATGGCTCCCACTACCCGGGATCTTGAGGCTCTC GCCGTCCACCACAACTCCGACATCATGGCTGATGATCTGGCCGAGAAGAA GGTCTCCGCTAATGAATCCCCCCCGGAAAACGACCCTTTTGGCAATGAGG AGTGTGGTGAGGTCAAGTACCGTGTCATGAAATGGTGGCACTGTGGTATA TTGATGATTGCGGAGAATATCTCCCTGGGAATTCTGTCCTTGCCATCGGC CGTGGCGACTCTTGGAATCGTCCCCTCCATCTTCCTCATCCTGGGCTTGT CTGGCATTTCCTGGTACACTGGTTATGTCATCGGCCAGTTTAAGCTGCGC TATCCCCAAGTCCACAGCATGGGTGATGCGGGAGAAATCCTCTTTGGCCG CATCGGCCGCGAAATTCTCTTCTTTGGCCAATTGCTGTTCTGTATCTTTT TGATGTCCAGCCACATTCTCACCTTCACCGTGCTGTTCAACACCATTACC GGTCATGGCACCTGCACCATCGTCTTCGGCGTCGTCGGTTTGGTTGTCAG CTTCATCGGTGCTCTGCCTCGCACCATGGGCAAGGTGTATTGGATGTCTC TCGCCTCTTGTACCAGTATCACCGTTGCCACGATCGTCACCATGGTGGCC ATCGCTGTGCAAGCGCCCGATCACGTTCAGGTCGATATCACCACCCATCC TAGCTTCTCGACTGCTTTCCTGTCAGTGACCAACATCGTCTTCGCCTTCA TTGCTCACGTGGCCTTCTTCGGATTTGCCTCGGAAATGGAGGATCCTCGC GACTTCCCCAAGTCGCTGGCCATGCTGCAGGTCACGGATACAACCATGTA CATCGTCACGGCCATGGTCATCTACCGTTACGCTGGTCCTGATGTTGCTT CCCCGGCGCTGTCCTCTGCCGGTCCGCTGATGAGCAAGGTTGCCTACGGC CTTGCCATTCCTACCGTGATCATTGCCGGAGTTGTGTTCGGTCATGTCGC GTCCAAGTACATCTACGTTCGTGTCTGGCGCGGCTCCCCCCAGATGCACA CGAACAGTCTTGCGGCTGTCGGATCGTGGGTCGCCATTGCACTGGGCGTG TGGGTAATTGCTTGGATCATTGCCGAGTCAATCCCCGTGTTCAACGATTT GTTGAGTTTGATCGTATGCTTCCCTAGCCCCTGAATGGCTCCCACTACCC GGGATCTTGAGGCTCTCGCCGTCCACCACAACTCCGACATCATGGCTGAT GATCTGGCCGAGAAGAAGGTCTCCGCTAATGAATCCCCCCCGGAAAACGA CCCTTTTGGCAATGAGGAGTGTGGTGAGGTCAAGTACCGTGTCATGAAAT GGTGGCACTGTGGTATATTGATGATTGCGGAGAATATCTCCCTGGGAATT CTGTCCTTGCCATCGGCCGTGGCGACTCTTGGAATCGTCCCCTCCATCTT CCTCATCCTGGGCTTGTCTGGCATTTCCTGGTACACTGGTTATGTCATCG GCCAGTTTAAGCTGCGCTATCCCCAAGTCCACAGCATGGGTGATGCGGGA GAAATCCTCTTTGGCCGCATCGGCCGCGAAATTCTCTTCTTTGGCCAATT GCTGTTCTGTATCTTTTTGATGTCCAGCCACATTCTCACCTTCACCGTGC TGTTCAACACCATTACCGGTCATGGCACCTGCACCATCGTCTTCGGCGTC GTCGGTTTGGTTGTCAGCTTCATCGGTGCTCTGCCTCGCACCATGGGCAA GGTGTATTGGATGTCTCTCGCCTCTTGTACCAGTATCACCGTTGCCACGA TCGTCACCATGGTGGCCATCGCTGTGCAAGCGCCCGATCACGTTCAGGTC GATATCACCACCCATCCTAGCTTCTCGACTGCTTTCCTGTCAGTGACCAA CATCGTCTTCGCCTTCATTGCTCACGTGGCCTTCTTCGGATTTGCCTCGG AAATGGAGGATCCTCGCGACTTCCCCAAGTCGCTGGCCATGCTGCAGGTC ACGGATACAACCATGTACATCGTCACGGCCATGGTCATCTACCGTTACGC TGGTCCTGATGTTGCTTCCCCGGCGCTGTCCTCTGCCGGTCCGCTGATGA GCAAGGTTGCCTACGGCCTTGCCATTCCTACCGTGATCATTGCCGGAGTT GTGTTCGGTCATGTCGCGTCCAAGTACATCTACGTTCGTGTCTGGCGCGG CTCCCCCCAGATGCACACGAACAGTCTTGCGGCTGTCGGATCGTGGGTCG CCATTGCACTGGGCGTGTGGGTAATTGCTTGGATCATTGCCGAGTCAATC CCCGTGTTCAACGATTTGTTGAGTTTGATCGTATGCTTCCCTAGCCCCTG AATGGCTCCCACTACCCGGGATCTTGAGGCTCTCGCCGTCCACCACAACT CCGACATCATGGCTGATGATCTGGCCGAGAAGAAGGTCTCCGCTAATGAA TCCCCCCCGGAAAACGACCCTTTTGGCAATGAGGAGTGTGGTGAGGTCAA GTACCGTGTCATGAAATGGTGGCACTGTGGTATATTGATGATTGCGGAGA ATATCTCCCTGGGAATTCTGTCCTTGCCATCGGCCGTGGCGACTCTTGGA ATCGTCCCCTCCATCTTCCTCATCCTGGGCTTGTCTGGCATTTCCTGGTA CACTGGTTATGTCATCGGCCAGTTTAAGCTGCGCTATCCCCAAGTCCACA GCATGGGTGATGCGGGAGAAATCCTCTTTGGCCGCATCGGCCGCGAAATT CTCTTCTTTGGCCAATTGCTGTTCTGTATCTTTTTGATGTCCAGCCACAT TCTCACCTTCACCGTGCTGTTCAACACCATTACCGGTCATGGCACCTGCA CCATCGTCTTCGGCGTCGTCGGTTTGGTTGTCAGCTTCATCGGTGCTCTG CCTCGCACCATGGGCAAGGTGTATTGGATGTCTCTCGCCTCTTGTACCAG TATCACCGTTGCCACGATCGTCACCATGGTGGCCATCGCTGTGCAAGCGC CCGATCACGTTCAGGTCGATATCACCACCCATCCTAGCTTCTCGACTGCT TTCCTGTCAGTGACCAACATCGTCTTCGCCTTCATTGCTCACGTGGCCTT CTTCGGATTTGCCTCGGAAATGGAGGATCCTCGCGACTTCCCCAAGTCGC TGGCCATGCTGCAGGTCACGGATACAACCATGTACATCGTCACGGCCATG GTCATCTACCGTTACGCTGGTCCTGATGTTGCTTCCCCGGCGCTGTCCTC TGCCGGTCCGCTGATGAGCAAGGTTGCCTACGGCCTTGCCATTCCTACCG TGATCATTGCCGGAGTTGTGTTCGGTCATGTCGCGTCCAAGTACATCTAC GTTCGTGTCTGGCGCGGCTCCCCCCAGATGCACACGAACAGTCTTGCGGC TGTCGGATCGTGGGTCGCCATTGCACTGGGCGTGTGGGTAATTGCTTGGA TCATTGCCGAGTCAATCCCCGTGTTCAACGATTTGTTGAGTTTGATCGTA TGCTTCCCTAGCCCCTGAATGGCTCCCACTACCCGGGATCTTGAGGCTCT CGCCGTCCACCACAACTCCGACATCATGGCTGATGATCTGGCCGAGAAGA AGGTCTCCGCTAATGAATCCCCCCCGGAAAACGACCCTTTTGGCAATGAG GAGTGTGGTGAGGTCAAGTACCGTGTCATGAAATGGTGGCACTGTGGTAT ATTGATGATTGCGGAGAATATCTCCCTGGGAATTCTGTCCTTGCCATCGG CCGTGGCGACTCTTGGAATCGTCCCCTCCATCTTCCTCATCCTGGGCTTG TCTGGCATTTCCTGGTACACTGGTTATGTCATCGGCCAGTTTAAGCTGCG CTATCCCCAAGTCCACAGCATGGGTGATGCGGGAGAAATCCTCTTTGGCC GCATCGGCCGCGAAATTCTCTTCTTTGGCCAATTGCTGTTCTGTATCTTT TTGATGTCCAGCCACATTCTCACCTTCACCGTGCTGTTCAACACCATTAC CGGTCATGGCACCTGCACCATCGTCTTCGGCGTCGTCGGTTTGGTTGTCA GCTTCATCGGTGCTCTGCCTCGCACCATGGGCAAGGTGTATTGGATGTCT CTCGCCTCTTGTACCAGTATCACCGTTGCCACGATCGTCACCATGGTGGC CATCGCTGTGCAAGCGCCCGATCACGTTCAGGTCGATATCACCACCCATC CTAGCTTCTCGACTGCTTTCCTGTCAGTGACCAACATCGTCTTCGCCTTC ATTGCTCACGTGGCCTTCTTCGGATTTGCCTCGGAAATGGAGGATCCTCG CGACTTCCCCAAGTCGCTGGCCATGCTGCAGGTCACGGATACAACCATGT ACATCGTCACGGCCATGGTCATCTACCGTTACGCTGGTCCTGATGTTGCT TCCCCGGCGCTGTCCTCTGCCGGTCCGCTGATGAGCAAGGTTGCCTACGG CCTTGCCATTCCTACCGTGATCATTGCCGGAGTTGTGTTCGGTCATGTCG CGTCCAAGTACATCTACGTTCGTGTCTGGCGCGGCTCCCCCCAGATGCAC ACGAACAGTCTTGCGGCTGTCGGATCGTGGGTCGCCATTGCACTGGGCGT GTGGGTAATTGCTTGGATCATTGCCGAGTCAATCCCCGTGTTCAACGATT TGTTGAGTTTGATCGTATGCTTCCCTAGCCCCTGAATGGCTCCCACTACC CGGGATCTTGAGGCTCTCGCCGTCCACCACAACTCCGACATCATGGCTGA TGATCTGGCCGAGAAGAAGGTCTCCGCTAATGAATCCCCCCCGGAAAACG ACCCTTTTGGCAATGAGGAGTGTGGTGAGGTCAAGTACCGTGTCATGAAA TGGTGGCACTGTGGTATATTGATGATTGCGGAGAATATCTCCCTGGGAAT TCTGTCCTTGCCATCGGCCGTGGCGACTCTTGGAATCGTCCCCTCCATCT TCCTCATCCTGGGCTTGTCTGGCATTTCCTGGTACACTGGTTATGTCATC GGCCAGTTTAAGCTGCGCTATCCCCAAGTCCACAGCATGGGTGATGCGGG AGAAATCCTCTTTGGCCGCATCGGCCGCGAAATTCTCTTCTTTGGCCAAT TGCTGTTCTGTATCTTTTTGATGTCCAGCCACATTCTCACCTTCACCGTG CTGTTCAACACCATTACCGGTCATGGCACCTGCACCATCGTCTTCGGCGT CGTCGGTTTGGTTGTCAGCTTCATCGGTGCTCTGCCTCGCACCATGGGCA AGGTGTATTGGATGTCTCTCGCCTCTTGTACCAGTATCACCGTTGCCACG ATCGTCACCATGGTGGCCATCGCTGTGCAAGCGCCCGATCACGTTCAGGT CGATATCACCACCCATCCTAGCTTCTCGACTGCTTTCCTGTCAGTGACCA ACATCGTCTTCGCCTTCATTGCTCACGTGGCCTTCTTCGGATTTGCCTCG GAAATGGAGGATCCTCGCGACTTCCCCAAGTCGCTGGCCATGCTGCAGGT CACGGATACAACCATGTACATCGTCACGGCCATGGTCATCTACCGTTACG CTGGTCCTGATGTTGCTTCCCCGGCGCTGTCCTCTGCCGGTCCGCTGATG AGCAAGGTTGCCTACGGCCTTGCCATTCCTACCGTGATCATTGCCGGAGT TGTGTTCGGTCATGTCGCGTCCAAGTACATCTACGTTCGTGTCTGGCGCG GCTCCCCCCAGATGCACACGAACAGTCTTGCGGCTGTCGGATCGTGGGTC GCCATTGCACTGGGCGTGTGGGTAATTGCTTGGATCATTGCCGAGTCAAT CCCCGTGTTCAACGATTTGTTGAGTTTGATCGTATGCTTCCCTAGCCCCT GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_001385-T2.utr5p1 | KJC3_001385-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch1 | supercontig | ch1:3570557..3573280 + |
|