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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3574175..3575188+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001386-T1 ID=KJC3_001386-T1|Name=KJC3_001386-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1014bp|location=Sequence derived from alignment at ch1:3574175..3575188+ (Aspergillus niger KJC3)
CTGCAAGAGGGACAACGTTACAGCTCGCATCTCCAGCGTTGCGTCGGAAG
CGCCCGTCTTTCCCATCACCCCTAGCTTCCTGCACCGCCAATGAGGCGTC
GCTGCCTTTGGATTATCCAGGCAATTGTCCTGCTGGGCCTTCTCTCTGCA
TTTTACTATACACATATACAGTCCCAGGCGCTTTCACAGCAAGATTCTGT
CCCGACTGAACCTCTCGAGGTCGCCATTCCGCAGACAGTCCACCAACTCT
TCATCTCGACACCGGGAACCCGCGGATCCAGCTTCTCTCCGGATAGACAC
AGCACCTCGTGGCTCCAATCAGGATGGAAGGTCGAGTACTGGAGGGAGTC
GTCGTGTCTCGAACTTGCACACGAGCTCGATGATACTGGGTCATACGCCG
CCACATTTCAGGCCCTACCCGTCCCGATTCTAAAATCTGACTTTTGTCGC
TACCTGATTTTATTCGGGCGGGGTGGGATCTACAATGACCTCGATGTCCA
CCTCCTCCAGCCGTTGCCGTGGCCAGTAATGGGGCCAGTCAAGGACGGAG
ATGAAGAACCCCCGGCTGTCATTGTCGGTCTAGAAGGCGACGCCGCCACA
ACTGGCCTGCCCCGATCTCCGCAATTTGTTCAGTGGACCATGGCATCTGT
TCCCGGTCACCCCATCTTTCGGGACGTGTTGCAGTCCATTGTAGACCGCA
CAGTTCACTATGTCTCGACTCAAACTGCAGAAGCTGAGACGGACATCGAC
GTGATGAGCTGGACTGGTCCCAGTGTGTGGACAGATGCAGTACTAGGATA
TCTACACTCCGATGATGAGCAGATTCAGCAACTCCGCGATCTTCACGAGA
TCGTGCGCATGCGTGACGTGGTCATCCTTCCGCGACGATCTTTTGCGGTG
CTCCAGGGTGAAGACCAATCTGCACCAGACGTTCTGGTTAAGCATTATTT
CTCGGGAAGTTGGAAGGCGTGTGCTCGAGAATGGCTCCGCTGGCTGTGGC
CGGGAGGTTGTTGA back to topCoding sequence (CDS) from alignment at ch1:3574175..3575188+ >KJC3_001386-T1 ID=KJC3_001386-T1|Name=KJC3_001386-T1|organism=Aspergillus niger KJC3|type=CDS|length=924bp|location=Sequence derived from alignment at ch1:3574175..3575188+ (Aspergillus niger KJC3)
ATGAGGCGTCGCTGCCTTTGGATTATCCAGGCAATTGTCCTGCTGGGCCT
TCTCTCTGCATTTTACTATACACATATACAGTCCCAGGCGCTTTCACAGC
AAGATTCTGTCCCGACTGAACCTCTCGAGGTCGCCATTCCGCAGACAGTC
CACCAACTCTTCATCTCGACACCGGGAACCCGCGGATCCAGCTTCTCTCC
GGATAGACACAGCACCTCGTGGCTCCAATCAGGATGGAAGGTCGAGTACT
GGAGGGAGTCGTCGTGTCTCGAACTTGCACACGAGCTCGATGATACTGGG
TCATACGCCGCCACATTTCAGGCCCTACCCGTCCCGATTCTAAAATCTGA
CTTTTGTCGCTACCTGATTTTATTCGGGCGGGGTGGGATCTACAATGACC
TCGATGTCCACCTCCTCCAGCCGTTGCCGTGGCCAGTAATGGGGCCAGTC
AAGGACGGAGATGAAGAACCCCCGGCTGTCATTGTCGGTCTAGAAGGCGA
CGCCGCCACAACTGGCCTGCCCCGATCTCCGCAATTTGTTCAGTGGACCA
TGGCATCTGTTCCCGGTCACCCCATCTTTCGGGACGTGTTGCAGTCCATT
GTAGACCGCACAGTTCACTATGTCTCGACTCAAACTGCAGAAGCTGAGAC
GGACATCGACGTGATGAGCTGGACTGGTCCCAGTGTGTGGACAGATGCAG
TACTAGGATATCTACACTCCGATGATGAGCAGATTCAGCAACTCCGCGAT
CTTCACGAGATCGTGCGCATGCGTGACGTGGTCATCCTTCCGCGACGATC
TTTTGCGGTGCTCCAGGGTGAAGACCAATCTGCACCAGACGTTCTGGTTA
AGCATTATTTCTCGGGAAGTTGGAAGGCGTGTGCTCGAGAATGGCTCCGC
TGGCTGTGGCCGGGAGGTTGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001386-T1.utr5p1 | KJC3_001386-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR007577 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3574175..3575188 + |
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