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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3583644..3585213- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001392-T1 ID=KJC3_001392-T1|Name=KJC3_001392-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1570bp|location=Sequence derived from alignment at ch1:3583644..3585213- (Aspergillus niger KJC3)
CAACCATGTCAGTGCTGAGCTTGCCAGATTCCACCCGGGATAATGACAGC
CTGATAGGAAATTCTCCACATCCAGCCGAACCGTCGATATGGACTGATCG
GGCCGTGCAGGAGGCATGCCTGATGCGCTACTTCGTTGAGGAGCTGGCCC
CATGGGTAAAGTCTATTCCCTCAACCCTCATCAGCAACACGACCCCTGAG
AATGTCGGATGCAGTTCGATTCCTGCGATGCTGGTAAGCATTTTGCCCTT
GTAATGCCGGATCGCGCAGCCCAGTGTCCGGCCTTGCTCTACGCTGTCTA
CTCGGCAGCTGCACGACATCTCGGTCGCTGGCAGTCCACGGGGACCCGCC
CGGTCGCCTTTGCGGGGAGACGTCTACCCAATCTTGGGGATGGCATGGCC
CTCGATTACCAGTCTCTCTGCATTTCCCATTTGGTGTCAGCAGATGACGC
CGAGATTCACAACGTGGACCTCCTGGCGGCGTCTGTCATCCTGCGTTTTT
ATGAGGAATTCGACGGTTAGTCGGGTTCGTTTACCTGCAATCTATGTTTA
AATTGCTGACAGGCATGAGTCACAGCGGCCCTAGTTGGCAGTGACGGGAA
AACTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCAGGGCCACGCTG
CATTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGGTTGGCATCCGA
CAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCCAAGCTCGATCT
CAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTCCGCGGACGATC
CCACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATGTGCTCCGGTAT
TGCTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAGGAGTTGTGTGC
CTACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTTTGACCCCTTGT
ATTGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTCCCGTTTTGTGG
TATTTGGATGACTGCATCGGTAAGACTAGACTCCTTAGAAGAGAAGATCA
ATCAATGCTGACCAAGCTCACAGTCACTGGTATTCAGCATTGCCACCTCG
CACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTTGGGCCT
GGTCGCAAGGCAGCCGTTGCACGAAGAGAGGTATCAGATGTACAACTTCG
CGTGCAGTTGAGTCTGATCGCTAACTACGATAGGCCGAGGTCAAGCACCA
TGTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCC
TCGTTGCTGCCTGTATGGGAGTATCCATGTGTATGCTATCTTTTCTCCCC
TATGGCAAAAATATCCTGGCTGATCCTGTTGTTTCAGGTGGTGATCGCAT
GACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATTTTGCTCAAGACCG
AGCAGATTCATGGGCTATCCACCACCCATGCACAAACCTCTCTCCGGGCG
GCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCATCCTTTAATCTCAA
CGCCCGACAGAGTTTATAAG back to topCoding sequence (CDS) from alignment at ch1:3583644..3585213- >KJC3_001392-T1 ID=KJC3_001392-T1|Name=KJC3_001392-T1|organism=Aspergillus niger KJC3|type=CDS|length=7686bp|location=Sequence derived from alignment at ch1:3583644..3585213- (Aspergillus niger KJC3)
GTGGTGATCGCATGACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATT
TTGCTCAAGACCGAGCAGATTCATGGGCTATCCACCACCCATGCACAAAC
CTCTCTCCGGGCGGCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCAT
CCTTTAATCTCAACGCCCGACAGAGTTTATAAGCCGAGGTCAAGCACCAT
GTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCCT
CGTTGCTGCCTGTATGGGAGTATCCATGTTCACTGGTATTCAGCATTGCC
ACCTCGCACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTT
GGGCCTGGTCGCAAGGCAGCCGTTGCACGAAGAGAGCGGCCCTAGTTGGC
AGTGACGGGAAAACTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCA
GGGCCACGCTGCATTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGG
TTGGCATCCGACAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCC
AAGCTCGATCTCAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTC
CGCGGACGATCCCACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATG
TGCTCCGGTATTGCTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAG
GAGTTGTGTGCCTACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTT
TGACCCCTTGTATTGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTC
CCGTTTTGTGGTATTTGGATGACTGCATCGTTCGATTCCTGCGATGCTGG
TAAGCATTTTGCCCTTGTAATGCCGGATCGCGCAGCCCAGTGTCCGGCCT
TGCTCTACGCTGTCTACTCGGCAGCTGCACGACATCTCGGTCGCTGGCAG
TCCACGGGGACCCGCCCGGTCGCCTTTGCGGGGAGACGTCTACCCAATCT
TGGGGATGGCATGGCCCTCGATTACCAGTCTCTCTGCATTTCCCATTTGG
TGTCAGCAGATGACGCCGAGATTCACAACGTGGACCTCCTGGCGGCGTCT
GTCATCCTGCGTTTTTATGAGGAATTCGACGATGTCAGTGCTGAGCTTGC
CAGATTCCACCCGGGATAATGACAGCCTGATAGGAAATTCTCCACATCCA
GCCGAACCGTCGATATGGACTGATCGGGCCGTGCAGGAGGCATGCCTGAT
GCGCTACTTCGTTGAGGAGCTGGCCCCATGGGTGGTGATCGCATGACTGA
TAGAAGGGAGCAAGAGGCCCTGTTTGACATTTTGCTCAAGACCGAGCAGA
TTCATGGGCTATCCACCACCCATGCACAAACCTCTCTCCGGGCGGCCTGG
GAATGGGATGCTACAATCTCGCAAGTGTCATCCTTTAATCTCAACGCCCG
ACAGAGTTTATAAGCCGAGGTCAAGCACCATGTCTTCAGTCTTTGTGGGA
TAGCCATCTCTAACAAAACCGCTCCGGCCCTCGTTGCTGCCTGTATGGGA
GTATCCATGTTCACTGGTATTCAGCATTGCCACCTCGCACGTCTTCTTCT
GACGGTGTTTGATCCCACGGTGCCTCGCCTTGGGCCTGGTCGCAAGGCAG
CCGTTGCACGAAGAGAGCGGCCCTAGTTGGCAGTGACGGGAAAACTCATC
TGCGTGGCACCCAAGTCTTCCTCAACGCTCAGGGCCACGCTGCATTGTGC
TGTGGCGGACTGCAACTAGCGGCCTTCTGGGTTGGCATCCGACAGGAGTT
TCACAAGGCCTTCCTCGAACAGCGAGTCGCCAAGCTCGATCTCAGTTGCT
GTGAAGCGTCTGTCTATCGGCAGTTGGATTCCGCGGACGATCCCACCTGG
GCGAATCGAGTGGTGTTGCACTGTGTCGATGTGCTCCGGTATTGCTATGG
TGAGGAAGGTCAGACCCGGGGGCGATACGAGGAGTTGTGTGCCTACAACC
AGCAATGGCAAGCTCTAACTCCGCCTACCTTTGACCCCTTGTATTGTCGA
CCTCCAAATACCGTCAAGGGGGAGATTTTTCCCGTTTTGTGGTATTTGGA
TGACTGCATCGTTCGATTCCTGCGATGCTGGTAAGCATTTTGCCCTTGTA
ATGCCGGATCGCGCAGCCCAGTGTCCGGCCTTGCTCTACGCTGTCTACTC
GGCAGCTGCACGACATCTCGGTCGCTGGCAGTCCACGGGGACCCGCCCGG
TCGCCTTTGCGGGGAGACGTCTACCCAATCTTGGGGATGGCATGGCCCTC
GATTACCAGTCTCTCTGCATTTCCCATTTGGTGTCAGCAGATGACGCCGA
GATTCACAACGTGGACCTCCTGGCGGCGTCTGTCATCCTGCGTTTTTATG
AGGAATTCGACGATGTCAGTGCTGAGCTTGCCAGATTCCACCCGGGATAA
TGACAGCCTGATAGGAAATTCTCCACATCCAGCCGAACCGTCGATATGGA
CTGATCGGGCCGTGCAGGAGGCATGCCTGATGCGCTACTTCGTTGAGGAG
CTGGCCCCATGGGTGGTGATCGCATGACTGATAGAAGGGAGCAAGAGGCC
CTGTTTGACATTTTGCTCAAGACCGAGCAGATTCATGGGCTATCCACCAC
CCATGCACAAACCTCTCTCCGGGCGGCCTGGGAATGGGATGCTACAATCT
CGCAAGTGTCATCCTTTAATCTCAACGCCCGACAGAGTTTATAAGCCGAG
GTCAAGCACCATGTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAAC
CGCTCCGGCCCTCGTTGCTGCCTGTATGGGAGTATCCATGTTCACTGGTA
TTCAGCATTGCCACCTCGCACGTCTTCTTCTGACGGTGTTTGATCCCACG
GTGCCTCGCCTTGGGCCTGGTCGCAAGGCAGCCGTTGCACGAAGAGAGCG
GCCCTAGTTGGCAGTGACGGGAAAACTCATCTGCGTGGCACCCAAGTCTT
CCTCAACGCTCAGGGCCACGCTGCATTGTGCTGTGGCGGACTGCAACTAG
CGGCCTTCTGGGTTGGCATCCGACAGGAGTTTCACAAGGCCTTCCTCGAA
CAGCGAGTCGCCAAGCTCGATCTCAGTTGCTGTGAAGCGTCTGTCTATCG
GCAGTTGGATTCCGCGGACGATCCCACCTGGGCGAATCGAGTGGTGTTGC
ACTGTGTCGATGTGCTCCGGTATTGCTATGGTGAGGAAGGTCAGACCCGG
GGGCGATACGAGGAGTTGTGTGCCTACAACCAGCAATGGCAAGCTCTAAC
TCCGCCTACCTTTGACCCCTTGTATTGTCGACCTCCAAATACCGTCAAGG
GGGAGATTTTTCCCGTTTTGTGGTATTTGGATGACTGCATCGTTCGATTC
CTGCGATGCTGGTAAGCATTTTGCCCTTGTAATGCCGGATCGCGCAGCCC
AGTGTCCGGCCTTGCTCTACGCTGTCTACTCGGCAGCTGCACGACATCTC
GGTCGCTGGCAGTCCACGGGGACCCGCCCGGTCGCCTTTGCGGGGAGACG
TCTACCCAATCTTGGGGATGGCATGGCCCTCGATTACCAGTCTCTCTGCA
TTTCCCATTTGGTGTCAGCAGATGACGCCGAGATTCACAACGTGGACCTC
CTGGCGGCGTCTGTCATCCTGCGTTTTTATGAGGAATTCGACGATGTCAG
TGCTGAGCTTGCCAGATTCCACCCGGGATAATGACAGCCTGATAGGAAAT
TCTCCACATCCAGCCGAACCGTCGATATGGACTGATCGGGCCGTGCAGGA
GGCATGCCTGATGCGCTACTTCGTTGAGGAGCTGGCCCCATGGGTGGTGA
TCGCATGACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATTTTGCTCA
AGACCGAGCAGATTCATGGGCTATCCACCACCCATGCACAAACCTCTCTC
CGGGCGGCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCATCCTTTAA
TCTCAACGCCCGACAGAGTTTATAAGCCGAGGTCAAGCACCATGTCTTCA
GTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCCTCGTTGCT
GCCTGTATGGGAGTATCCATGTTCACTGGTATTCAGCATTGCCACCTCGC
ACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTTGGGCCTG
GTCGCAAGGCAGCCGTTGCACGAAGAGAGCGGCCCTAGTTGGCAGTGACG
GGAAAACTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCAGGGCCAC
GCTGCATTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGGTTGGCAT
CCGACAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCCAAGCTCG
ATCTCAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTCCGCGGAC
GATCCCACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATGTGCTCCG
GTATTGCTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAGGAGTTGT
GTGCCTACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTTTGACCCC
TTGTATTGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTCCCGTTTT
GTGGTATTTGGATGACTGCATCGTTCGATTCCTGCGATGCTGGTAAGCAT
TTTGCCCTTGTAATGCCGGATCGCGCAGCCCAGTGTCCGGCCTTGCTCTA
CGCTGTCTACTCGGCAGCTGCACGACATCTCGGTCGCTGGCAGTCCACGG
GGACCCGCCCGGTCGCCTTTGCGGGGAGACGTCTACCCAATCTTGGGGAT
GGCATGGCCCTCGATTACCAGTCTCTCTGCATTTCCCATTTGGTGTCAGC
AGATGACGCCGAGATTCACAACGTGGACCTCCTGGCGGCGTCTGTCATCC
TGCGTTTTTATGAGGAATTCGACGATGTCAGTGCTGAGCTTGCCAGATTC
CACCCGGGATAATGACAGCCTGATAGGAAATTCTCCACATCCAGCCGAAC
CGTCGATATGGACTGATCGGGCCGTGCAGGAGGCATGCCTGATGCGCTAC
TTCGTTGAGGAGCTGGCCCCATGGGTGGTGATCGCATGACTGATAGAAGG
GAGCAAGAGGCCCTGTTTGACATTTTGCTCAAGACCGAGCAGATTCATGG
GCTATCCACCACCCATGCACAAACCTCTCTCCGGGCGGCCTGGGAATGGG
ATGCTACAATCTCGCAAGTGTCATCCTTTAATCTCAACGCCCGACAGAGT
TTATAAGCCGAGGTCAAGCACCATGTCTTCAGTCTTTGTGGGATAGCCAT
CTCTAACAAAACCGCTCCGGCCCTCGTTGCTGCCTGTATGGGAGTATCCA
TGTTCACTGGTATTCAGCATTGCCACCTCGCACGTCTTCTTCTGACGGTG
TTTGATCCCACGGTGCCTCGCCTTGGGCCTGGTCGCAAGGCAGCCGTTGC
ACGAAGAGAGCGGCCCTAGTTGGCAGTGACGGGAAAACTCATCTGCGTGG
CACCCAAGTCTTCCTCAACGCTCAGGGCCACGCTGCATTGTGCTGTGGCG
GACTGCAACTAGCGGCCTTCTGGGTTGGCATCCGACAGGAGTTTCACAAG
GCCTTCCTCGAACAGCGAGTCGCCAAGCTCGATCTCAGTTGCTGTGAAGC
GTCTGTCTATCGGCAGTTGGATTCCGCGGACGATCCCACCTGGGCGAATC
GAGTGGTGTTGCACTGTGTCGATGTGCTCCGGTATTGCTATGGTGAGGAA
GGTCAGACCCGGGGGCGATACGAGGAGTTGTGTGCCTACAACCAGCAATG
GCAAGCTCTAACTCCGCCTACCTTTGACCCCTTGTATTGTCGACCTCCAA
ATACCGTCAAGGGGGAGATTTTTCCCGTTTTGTGGTATTTGGATGACTGC
ATCGTTCGATTCCTGCGATGCTGGTAAGCATTTTGCCCTTGTAATGCCGG
ATCGCGCAGCCCAGTGTCCGGCCTTGCTCTACGCTGTCTACTCGGCAGCT
GCACGACATCTCGGTCGCTGGCAGTCCACGGGGACCCGCCCGGTCGCCTT
TGCGGGGAGACGTCTACCCAATCTTGGGGATGGCATGGCCCTCGATTACC
AGTCTCTCTGCATTTCCCATTTGGTGTCAGCAGATGACGCCGAGATTCAC
AACGTGGACCTCCTGGCGGCGTCTGTCATCCTGCGTTTTTATGAGGAATT
CGACGATGTCAGTGCTGAGCTTGCCAGATTCCACCCGGGATAATGACAGC
CTGATAGGAAATTCTCCACATCCAGCCGAACCGTCGATATGGACTGATCG
GGCCGTGCAGGAGGCATGCCTGATGCGCTACTTCGTTGAGGAGCTGGCCC
CATGGGTGGTGATCGCATGACTGATAGAAGGGAGCAAGAGGCCCTGTTTG
ACATTTTGCTCAAGACCGAGCAGATTCATGGGCTATCCACCACCCATGCA
CAAACCTCTCTCCGGGCGGCCTGGGAATGGGATGCTACAATCTCGCAAGT
GTCATCCTTTAATCTCAACGCCCGACAGAGTTTATAAGCCGAGGTCAAGC
ACCATGTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCG
GCCCTCGTTGCTGCCTGTATGGGAGTATCCATGTTCACTGGTATTCAGCA
TTGCCACCTCGCACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTC
GCCTTGGGCCTGGTCGCAAGGCAGCCGTTGCACGAAGAGAGCGGCCCTAG
TTGGCAGTGACGGGAAAACTCATCTGCGTGGCACCCAAGTCTTCCTCAAC
GCTCAGGGCCACGCTGCATTGTGCTGTGGCGGACTGCAACTAGCGGCCTT
CTGGGTTGGCATCCGACAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAG
TCGCCAAGCTCGATCTCAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTG
GATTCCGCGGACGATCCCACCTGGGCGAATCGAGTGGTGTTGCACTGTGT
CGATGTGCTCCGGTATTGCTATGGTGAGGAAGGTCAGACCCGGGGGCGAT
ACGAGGAGTTGTGTGCCTACAACCAGCAATGGCAAGCTCTAACTCCGCCT
ACCTTTGACCCCTTGTATTGTCGACCTCCAAATACCGTCAAGGGGGAGAT
TTTTCCCGTTTTGTGGTATTTGGATGACTGCATCGTTCGATTCCTGCGAT
GCTGGTAAGCATTTTGCCCTTGTAATGCCGGATCGCGCAGCCCAGTGTCC
GGCCTTGCTCTACGCTGTCTACTCGGCAGCTGCACGACATCTCGGTCGCT
GGCAGTCCACGGGGACCCGCCCGGTCGCCTTTGCGGGGAGACGTCTACCC
AATCTTGGGGATGGCATGGCCCTCGATTACCAGTCTCTCTGCATTTCCCA
TTTGGTGTCAGCAGATGACGCCGAGATTCACAACGTGGACCTCCTGGCGG
CGTCTGTCATCCTGCGTTTTTATGAGGAATTCGACGATGTCAGTGCTGAG
CTTGCCAGATTCCACCCGGGATAATGACAGCCTGATAGGAAATTCTCCAC
ATCCAGCCGAACCGTCGATATGGACTGATCGGGCCGTGCAGGAGGCATGC
CTGATGCGCTACTTCGTTGAGGAGCTGGCCCCATGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001392-T1.utr3p1 | KJC3_001392-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001392-T1.utr5p1 | KJC3_001392-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3583644..3585213 - |
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