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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3583644..3585213- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001392-T2 ID=KJC3_001392-T2|Name=KJC3_001392-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1570bp|location=Sequence derived from alignment at ch1:3583644..3585213- (Aspergillus niger KJC3)
CAACCATGTCAGTGCTGAGCTTGCCAGATTCCACCCGGGATAATGACAGC
CTGATAGGAAATTCTCCACATCCAGCCGAACCGTCGATATGGACTGATCG
GGCCGTGCAGGAGGCATGCCTGATGCGCTACTTCGTTGAGGAGCTGGCCC
CATGGGTAAAGTCTATTCCCTCAACCCTCATCAGCAACACGACCCCTGAG
AATGTCGGATGCAGTTCGATTCCTGCGATGCTGGTAAGCATTTTGCCCTT
GTAATGCCGGATCGCGCAGCCCAGTGTCCGGCCTTGCTCTACGCTGTCTA
CTCGGCAGCTGCACGACATCTCGGTCGCTGGCAGTCCACGGGGACCCGCC
CGGTCGCCTTTGCGGGGAGACGTCTACCCAATCTTGGGGATGGCATGGCC
CTCGATTACCAGTCTCTCTGCATTTCCCATTTGGTGTCAGCAGATGACGC
CGAGATTCACAACGTGGACCTCCTGGCGGCGTCTGTCATCCTGCGTTTTT
ATGAGGAATTCGACGGTTAGTCGGGTTCGTTTACCTGCAATCTATGTTTA
AATTGCTGACAGGCATGAGTCACAGCGGCCCTAGTTGGCAGTGACGGGAA
AACTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCAGGGCCACGCTG
CATTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGGTTGGCATCCGA
CAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCCAAGCTCGATCT
CAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTCCGCGGACGATC
CCACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATGTGCTCCGGTAT
TGCTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAGGAGTTGTGTGC
CTACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTTTGACCCCTTGT
ATTGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTCCCGTTTTGTGG
TATTTGGATGACTGCATCGGTAAGACTAGACTCCTTAGAAGAGAAGATCA
ATCAATGCTGACCAAGCTCACAGTCACTGGTATTCAGCATTGCCACCTCG
CACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTTGGGCCT
GGTCGCAAGGCAGCCGTTGCACGAAGAGAGGTATCAGATGTACAACTTCG
CGTGCAGTTGAGTCTGATCGCTAACTACGATAGGCCGAGGTCAAGCACCA
TGTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCC
TCGTTGCTGCCTGTATGGGAGTATCCATGTGTATGCTATCTTTTCTCCCC
TATGGCAAAAATATCCTGGCTGATCCTGTTGTTTCAGGTGGTGATCGCAT
GACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATTTTGCTCAAGACCG
AGCAGATTCATGGGCTATCCACCACCCATGCACAAACCTCTCTCCGGGCG
GCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCATCCTTTAATCTCAA
CGCCCGACAGAGTTTATAAG back to topCoding sequence (CDS) from alignment at ch1:3583644..3585213- >KJC3_001392-T2 ID=KJC3_001392-T2|Name=KJC3_001392-T2|organism=Aspergillus niger KJC3|type=CDS|length=5685bp|location=Sequence derived from alignment at ch1:3583644..3585213- (Aspergillus niger KJC3)
GTGGTGATCGCATGACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATT
TTGCTCAAGACCGAGCAGATTCATGGGCTATCCACCACCCATGCACAAAC
CTCTCTCCGGGCGGCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCAT
CCTTTAATCTCAACGCCCGACAGAGTTTATAAGCCGAGGTCAAGCACCAT
GTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCCT
CGTTGCTGCCTGTATGGGAGTATCCATGTTCACTGGTATTCAGCATTGCC
ACCTCGCACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTT
GGGCCTGGTCGCAAGGCAGCCGTTGCACGAAGAGAGCGGCCCTAGTTGGC
AGTGACGGGAAAACTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCA
GGGCCACGCTGCATTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGG
TTGGCATCCGACAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCC
AAGCTCGATCTCAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTC
CGCGGACGATCCCACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATG
TGCTCCGGTATTGCTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAG
GAGTTGTGTGCCTACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTT
TGACCCCTTGTATTGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTC
CCGTTTTGTGGTATTTGGATGACTGCATCGATGCAGTTCGATTCCTGCGA
TGCTGGTAAGCATTTTGCCCTTGTAATGCCGGATCGCGCAGCCCAGTGTC
CGGCCTTGCTCTACGCTGTCTACTCGGCAGCTGCACGACATCTCGGTCGC
TGGCAGTCCACGGGGACCCGCCCGGTCGCCTTTGCGGGGAGACGTCTACC
CAATCTTGGGGATGGCATGGCCCTCGATTACCAGTCTCTCTGCATTTCCC
ATTTGGTGTCAGCAGATGACGCCGAGATTCACAACGTGGACCTCCTGGCG
GCGTCTGTCATCCTGCGTTTTTATGAGGAATTCGACGGTGGTGATCGCAT
GACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATTTTGCTCAAGACCG
AGCAGATTCATGGGCTATCCACCACCCATGCACAAACCTCTCTCCGGGCG
GCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCATCCTTTAATCTCAA
CGCCCGACAGAGTTTATAAGCCGAGGTCAAGCACCATGTCTTCAGTCTTT
GTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCCTCGTTGCTGCCTGT
ATGGGAGTATCCATGTTCACTGGTATTCAGCATTGCCACCTCGCACGTCT
TCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTTGGGCCTGGTCGCA
AGGCAGCCGTTGCACGAAGAGAGCGGCCCTAGTTGGCAGTGACGGGAAAA
CTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCAGGGCCACGCTGCA
TTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGGTTGGCATCCGACA
GGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCCAAGCTCGATCTCA
GTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTCCGCGGACGATCCC
ACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATGTGCTCCGGTATTG
CTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAGGAGTTGTGTGCCT
ACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTTTGACCCCTTGTAT
TGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTCCCGTTTTGTGGTA
TTTGGATGACTGCATCGATGCAGTTCGATTCCTGCGATGCTGGTAAGCAT
TTTGCCCTTGTAATGCCGGATCGCGCAGCCCAGTGTCCGGCCTTGCTCTA
CGCTGTCTACTCGGCAGCTGCACGACATCTCGGTCGCTGGCAGTCCACGG
GGACCCGCCCGGTCGCCTTTGCGGGGAGACGTCTACCCAATCTTGGGGAT
GGCATGGCCCTCGATTACCAGTCTCTCTGCATTTCCCATTTGGTGTCAGC
AGATGACGCCGAGATTCACAACGTGGACCTCCTGGCGGCGTCTGTCATCC
TGCGTTTTTATGAGGAATTCGACGGTGGTGATCGCATGACTGATAGAAGG
GAGCAAGAGGCCCTGTTTGACATTTTGCTCAAGACCGAGCAGATTCATGG
GCTATCCACCACCCATGCACAAACCTCTCTCCGGGCGGCCTGGGAATGGG
ATGCTACAATCTCGCAAGTGTCATCCTTTAATCTCAACGCCCGACAGAGT
TTATAAGCCGAGGTCAAGCACCATGTCTTCAGTCTTTGTGGGATAGCCAT
CTCTAACAAAACCGCTCCGGCCCTCGTTGCTGCCTGTATGGGAGTATCCA
TGTTCACTGGTATTCAGCATTGCCACCTCGCACGTCTTCTTCTGACGGTG
TTTGATCCCACGGTGCCTCGCCTTGGGCCTGGTCGCAAGGCAGCCGTTGC
ACGAAGAGAGCGGCCCTAGTTGGCAGTGACGGGAAAACTCATCTGCGTGG
CACCCAAGTCTTCCTCAACGCTCAGGGCCACGCTGCATTGTGCTGTGGCG
GACTGCAACTAGCGGCCTTCTGGGTTGGCATCCGACAGGAGTTTCACAAG
GCCTTCCTCGAACAGCGAGTCGCCAAGCTCGATCTCAGTTGCTGTGAAGC
GTCTGTCTATCGGCAGTTGGATTCCGCGGACGATCCCACCTGGGCGAATC
GAGTGGTGTTGCACTGTGTCGATGTGCTCCGGTATTGCTATGGTGAGGAA
GGTCAGACCCGGGGGCGATACGAGGAGTTGTGTGCCTACAACCAGCAATG
GCAAGCTCTAACTCCGCCTACCTTTGACCCCTTGTATTGTCGACCTCCAA
ATACCGTCAAGGGGGAGATTTTTCCCGTTTTGTGGTATTTGGATGACTGC
ATCGATGCAGTTCGATTCCTGCGATGCTGGTAAGCATTTTGCCCTTGTAA
TGCCGGATCGCGCAGCCCAGTGTCCGGCCTTGCTCTACGCTGTCTACTCG
GCAGCTGCACGACATCTCGGTCGCTGGCAGTCCACGGGGACCCGCCCGGT
CGCCTTTGCGGGGAGACGTCTACCCAATCTTGGGGATGGCATGGCCCTCG
ATTACCAGTCTCTCTGCATTTCCCATTTGGTGTCAGCAGATGACGCCGAG
ATTCACAACGTGGACCTCCTGGCGGCGTCTGTCATCCTGCGTTTTTATGA
GGAATTCGACGGTGGTGATCGCATGACTGATAGAAGGGAGCAAGAGGCCC
TGTTTGACATTTTGCTCAAGACCGAGCAGATTCATGGGCTATCCACCACC
CATGCACAAACCTCTCTCCGGGCGGCCTGGGAATGGGATGCTACAATCTC
GCAAGTGTCATCCTTTAATCTCAACGCCCGACAGAGTTTATAAGCCGAGG
TCAAGCACCATGTCTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACC
GCTCCGGCCCTCGTTGCTGCCTGTATGGGAGTATCCATGTTCACTGGTAT
TCAGCATTGCCACCTCGCACGTCTTCTTCTGACGGTGTTTGATCCCACGG
TGCCTCGCCTTGGGCCTGGTCGCAAGGCAGCCGTTGCACGAAGAGAGCGG
CCCTAGTTGGCAGTGACGGGAAAACTCATCTGCGTGGCACCCAAGTCTTC
CTCAACGCTCAGGGCCACGCTGCATTGTGCTGTGGCGGACTGCAACTAGC
GGCCTTCTGGGTTGGCATCCGACAGGAGTTTCACAAGGCCTTCCTCGAAC
AGCGAGTCGCCAAGCTCGATCTCAGTTGCTGTGAAGCGTCTGTCTATCGG
CAGTTGGATTCCGCGGACGATCCCACCTGGGCGAATCGAGTGGTGTTGCA
CTGTGTCGATGTGCTCCGGTATTGCTATGGTGAGGAAGGTCAGACCCGGG
GGCGATACGAGGAGTTGTGTGCCTACAACCAGCAATGGCAAGCTCTAACT
CCGCCTACCTTTGACCCCTTGTATTGTCGACCTCCAAATACCGTCAAGGG
GGAGATTTTTCCCGTTTTGTGGTATTTGGATGACTGCATCGATGCAGTTC
GATTCCTGCGATGCTGGTAAGCATTTTGCCCTTGTAATGCCGGATCGCGC
AGCCCAGTGTCCGGCCTTGCTCTACGCTGTCTACTCGGCAGCTGCACGAC
ATCTCGGTCGCTGGCAGTCCACGGGGACCCGCCCGGTCGCCTTTGCGGGG
AGACGTCTACCCAATCTTGGGGATGGCATGGCCCTCGATTACCAGTCTCT
CTGCATTTCCCATTTGGTGTCAGCAGATGACGCCGAGATTCACAACGTGG
ACCTCCTGGCGGCGTCTGTCATCCTGCGTTTTTATGAGGAATTCGACGGT
GGTGATCGCATGACTGATAGAAGGGAGCAAGAGGCCCTGTTTGACATTTT
GCTCAAGACCGAGCAGATTCATGGGCTATCCACCACCCATGCACAAACCT
CTCTCCGGGCGGCCTGGGAATGGGATGCTACAATCTCGCAAGTGTCATCC
TTTAATCTCAACGCCCGACAGAGTTTATAAGCCGAGGTCAAGCACCATGT
CTTCAGTCTTTGTGGGATAGCCATCTCTAACAAAACCGCTCCGGCCCTCG
TTGCTGCCTGTATGGGAGTATCCATGTTCACTGGTATTCAGCATTGCCAC
CTCGCACGTCTTCTTCTGACGGTGTTTGATCCCACGGTGCCTCGCCTTGG
GCCTGGTCGCAAGGCAGCCGTTGCACGAAGAGAGCGGCCCTAGTTGGCAG
TGACGGGAAAACTCATCTGCGTGGCACCCAAGTCTTCCTCAACGCTCAGG
GCCACGCTGCATTGTGCTGTGGCGGACTGCAACTAGCGGCCTTCTGGGTT
GGCATCCGACAGGAGTTTCACAAGGCCTTCCTCGAACAGCGAGTCGCCAA
GCTCGATCTCAGTTGCTGTGAAGCGTCTGTCTATCGGCAGTTGGATTCCG
CGGACGATCCCACCTGGGCGAATCGAGTGGTGTTGCACTGTGTCGATGTG
CTCCGGTATTGCTATGGTGAGGAAGGTCAGACCCGGGGGCGATACGAGGA
GTTGTGTGCCTACAACCAGCAATGGCAAGCTCTAACTCCGCCTACCTTTG
ACCCCTTGTATTGTCGACCTCCAAATACCGTCAAGGGGGAGATTTTTCCC
GTTTTGTGGTATTTGGATGACTGCATCGATGCAGTTCGATTCCTGCGATG
CTGGTAAGCATTTTGCCCTTGTAATGCCGGATCGCGCAGCCCAGTGTCCG
GCCTTGCTCTACGCTGTCTACTCGGCAGCTGCACGACATCTCGGTCGCTG
GCAGTCCACGGGGACCCGCCCGGTCGCCTTTGCGGGGAGACGTCTACCCA
ATCTTGGGGATGGCATGGCCCTCGATTACCAGTCTCTCTGCATTTCCCAT
TTGGTGTCAGCAGATGACGCCGAGATTCACAACGTGGACCTCCTGGCGGC
GTCTGTCATCCTGCGTTTTTATGAGGAATTCGACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001392-T2.utr3p1 | KJC3_001392-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001392-T2.utr5p1 | KJC3_001392-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3583644..3585213 - |
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