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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3632296..3633664+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001408-T1 ID=KJC3_001408-T1|Name=KJC3_001408-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1369bp|location=Sequence derived from alignment at ch1:3632296..3633664+ (Aspergillus niger KJC3)
ACCGCTTCCCTGCACGAAATGTCTCCAACGACAGATAATAAACGGTGCCA
GGCGTATGAGCACGTCTCTGCCGTACATGGCGCATCTCAGGGTACCGTTC
ACCATCACGAGGCATCCGCCTTTCAGGCTAGCGAGATCCAAAGTCCCGCC
AAGATCATAGCACAATACCTGCTAAATGAGGTGCCGGAGTTTCAGCGACT
AACCGAGCTTCGACATAAGGTAAGGTTAAGCCGACCATTTCTAGGACCTT
GAGTTGACGAGTAAGATAGGGTTGGGAAAATCCGGCGGGTGATCGGTTCT
TCGAACAGCAGCGTCAAACAGCAGACAATGCTAATAAGAAAACAGCCAAG
CATTTCTTCAAAATGATGAAAGAAATTGGACATGACATGCAACAGCTTAC
GGATGTTTTCCAGATTAATAGTCCTTACCCGGACAAACAACGTATCCTTG
ACATGTGCATGGCACCGGGAGGCTTTCTTGGAACAGCCTTATGGGTTAAT
CCCAAAGCGCGAGCTATAGGATTCAGCTTACCAAGGCGTGAAGGAGGTCA
CAATGTTCTTTTACCTAAGCATGCTAATATTTCGGTGAAGTTCATTGACA
TCACCCTGTTGGCTGCGGATATGGGCGGGTTGGATATCCCGAACGATCAT
CCAGACGCTGGAAAATTTATATCCCGTCAATTCGAGCCTGGACAGGCTTT
TGATCTAGTCATATGTGATGGTCAGGTGCTTAGGAACCACGACAGGGCCA
CCTACCGTGAGCATCGAGAAGCCAGCAGACTAACCCTGACACAGCTGGCG
CTTGGATTGGAGCATGTCAAGCTGGGGGGAACCATGATCGTTCTTCTTCA
CAAAGTCGAATCTCCACATACCGTACAATTACTATATACATTCACAACCT
TTGCCTCAGTGCAACTGTACAAGCATCCCAGGTTTCATGCCAAGCGATCT
TCGTTTTACATGCTTGCAACCAATATCCGGAATGATTTTCCGGATGCAGC
CATGGCAATCCAAGGGTGGAAGAGGATGTGGGAAATTGCAACGTTTGGGA
CGGACGATACGTACAGTCAAGCGCTCCAACACAATGCTCCGGACATTGAT
CTCGTTTTGAAGAACTTTGGCCCTAGACTAGCCGTTCTAGGCAAGCATAT
TTGGGGTATCCAGGCAGATGCGCTGGCAAGAGCTCCATTTTTGAAGTACA
GTCTATTTTGACTAAGCGCTACGTGTTTTATATTTCTGTTGTACGGAATT
GGGATAAGTTACATTGGGACATCTCCTAAAACTGGACATTATATCAAGAT
CGGCTACTGGCCTGTTCAAAGTATTGAAGCAGTCTTGGTATACCGGTTAC
TGAAGTCCTAGGGTCAGTC back to topCoding sequence (CDS) from alignment at ch1:3632296..3633664+ >KJC3_001408-T1 ID=KJC3_001408-T1|Name=KJC3_001408-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch1:3632296..3633664+ (Aspergillus niger KJC3)
ATGTCTCCAACGACAGATAATAAACGGTGCCAGGCGTATGAGCACGTCTC
TGCCGTACATGGCGCATCTCAGGGTACCGTTCACCATCACGAGGCATCCG
CCTTTCAGGCTAGCGAGATCCAAAGTCCCGCCAAGATCATAGCACAATAC
CTGCTAAATGAGGTGCCGGAGTTTCAGCGACTAACCGAGCTTCGACATAA
GGGTTGGGAAAATCCGGCGGGTGATCGGTTCTTCGAACAGCAGCGTCAAA
CAGCAGACAATGCTAATAAGAAAACAGCCAAGCATTTCTTCAAAATGATG
AAAGAAATTGGACATGACATGCAACAGCTTACGGATGTTTTCCAGATTAA
TAGTCCTTACCCGGACAAACAACGTATCCTTGACATGTGCATGGCACCGG
GAGGCTTTCTTGGAACAGCCTTATGGGTTAATCCCAAAGCGCGAGCTATA
GGATTCAGCTTACCAAGGCGTGAAGGAGGTCACAATGTTCTTTTACCTAA
GCATGCTAATATTTCGGTGAAGTTCATTGACATCACCCTGTTGGCTGCGG
ATATGGGCGGGTTGGATATCCCGAACGATCATCCAGACGCTGGAAAATTT
ATATCCCGTCAATTCGAGCCTGGACAGGCTTTTGATCTAGTCATATGTGA
TGGTCAGGTGCTTAGGAACCACGACAGGGCCACCTACCGTGAGCATCGAG
AAGCCAGCAGACTAACCCTGACACAGCTGGCGCTTGGATTGGAGCATGTC
AAGCTGGGGGGAACCATGATCGTTCTTCTTCACAAAGTCGAATCTCCACA
TACCGTACAATTACTATATACATTCACAACCTTTGCCTCAGTGCAACTGT
ACAAGCATCCCAGGTTTCATGCCAAGCGATCTTCGTTTTACATGCTTGCA
ACCAATATCCGGAATGATTTTCCGGATGCAGCCATGGCAATCCAAGGGTG
GAAGAGGATGTGGGAAATTGCAACGTTTGGGACGGACGATACGTACAGTC
AAGCGCTCCAACACAATGCTCCGGACATTGATCTCGTTTTGAAGAACTTT
GGCCCTAGACTAGCCGTTCTAGGCAAGCATATTTGGGGTATCCAGGCAGA
TGCGCTGGCAAGAGCTCCATTTTTGAAGTACAGTCTATTTTGAATGTCTC
CAACGACAGATAATAAACGGTGCCAGGCGTATGAGCACGTCTCTGCCGTA
CATGGCGCATCTCAGGGTACCGTTCACCATCACGAGGCATCCGCCTTTCA
GGCTAGCGAGATCCAAAGTCCCGCCAAGATCATAGCACAATACCTGCTAA
ATGAGGTGCCGGAGTTTCAGCGACTAACCGAGCTTCGACATAAGGGTTGG
GAAAATCCGGCGGGTGATCGGTTCTTCGAACAGCAGCGTCAAACAGCAGA
CAATGCTAATAAGAAAACAGCCAAGCATTTCTTCAAAATGATGAAAGAAA
TTGGACATGACATGCAACAGCTTACGGATGTTTTCCAGATTAATAGTCCT
TACCCGGACAAACAACGTATCCTTGACATGTGCATGGCACCGGGAGGCTT
TCTTGGAACAGCCTTATGGGTTAATCCCAAAGCGCGAGCTATAGGATTCA
GCTTACCAAGGCGTGAAGGAGGTCACAATGTTCTTTTACCTAAGCATGCT
AATATTTCGGTGAAGTTCATTGACATCACCCTGTTGGCTGCGGATATGGG
CGGGTTGGATATCCCGAACGATCATCCAGACGCTGGAAAATTTATATCCC
GTCAATTCGAGCCTGGACAGGCTTTTGATCTAGTCATATGTGATGGTCAG
GTGCTTAGGAACCACGACAGGGCCACCTACCGTGAGCATCGAGAAGCCAG
CAGACTAACCCTGACACAGCTGGCGCTTGGATTGGAGCATGTCAAGCTGG
GGGGAACCATGATCGTTCTTCTTCACAAAGTCGAATCTCCACATACCGTA
CAATTACTATATACATTCACAACCTTTGCCTCAGTGCAACTGTACAAGCA
TCCCAGGTTTCATGCCAAGCGATCTTCGTTTTACATGCTTGCAACCAATA
TCCGGAATGATTTTCCGGATGCAGCCATGGCAATCCAAGGGTGGAAGAGG
ATGTGGGAAATTGCAACGTTTGGGACGGACGATACGTACAGTCAAGCGCT
CCAACACAATGCTCCGGACATTGATCTCGTTTTGAAGAACTTTGGCCCTA
GACTAGCCGTTCTAGGCAAGCATATTTGGGGTATCCAGGCAGATGCGCTG
GCAAGAGCTCCATTTTTGAAGTACAGTCTATTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032259 | methylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001408-T1.utr5p1 | KJC3_001408-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001408-T1.utr3p1 | KJC3_001408-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR002877 |
| DBxref | PFAM:PF01728 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3632296..3633664 + |
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