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KJC3_001411-T1, KJC3_001411-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001411-T1
Unique NameKJC3_001411-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3653854..3654406-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001411-T1 ID=KJC3_001411-T1|Name=KJC3_001411-T1|organism=Aspergillus niger KJC3|type=mRNA|length=553bp|location=Sequence derived from alignment at ch1:3653854..3654406- (Aspergillus niger KJC3)
ATGGCCTCAAAGCGGGAGCAAGAGCAGGAAAGAAAAAGAGTCAAAAACCT
TCAGGAACGGCTTAAGCGACGAAAAGACCGTCTTACCCAGGGTCTTCACG
ACTACGCTCTCTTGGCCGACGCCAAGGTATATATGCTCATCCAGGACCGC
CGAGGTGGCATAACGGAGTACAGAAGCACCCCAGACCGAAAATTTCCGCC
GACGTATGCACAGATTGTACGTGAAATACATGCCAGTCAGCTCCTTTGGA
CGCTAATTGATCTACCTATAGAGGCGACTCTTCCCATCGGCCAGCCTCTT
GACGCCTGAGAGCTTCGGAGTCGCTGTCAGTCAACCAGCGAAGATTGATC
AGTCCAACAAGCCTATCGAGCACTTTTTGGACCCGACTGCGGAGATGTTT
GCAGACGGCCGAGCGATGATTGGAGAGCCCTCCGCTCCGAGCAATAACCT
TGCTCATGTCCTGCCGGAACCAACTCTACAAGTGGGACCCACATCGATGC
CACTGCTCACGGAGACCGATGTGCAGTCCTACTTCACTTATACAGAATGC
TGA
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Coding sequence (CDS) from alignment at ch1:3653854..3654406-

>KJC3_001411-T1 ID=KJC3_001411-T1|Name=KJC3_001411-T1|organism=Aspergillus niger KJC3|type=CDS|length=996bp|location=Sequence derived from alignment at ch1:3653854..3654406- (Aspergillus niger KJC3)
AGGCGACTCTTCCCATCGGCCAGCCTCTTGACGCCTGAGAGCTTCGGAGT
CGCTGTCAGTCAACCAGCGAAGATTGATCAGTCCAACAAGCCTATCGAGC
ACTTTTTGGACCCGACTGCGGAGATGTTTGCAGACGGCCGAGCGATGATT
GGAGAGCCCTCCGCTCCGAGCAATAACCTTGCTCATGTCCTGCCGGAACC
AACTCTACAAGTGGGACCCACATCGATGCCACTGCTCACGGAGACCGATG
TGCAGTCCTACTTCACTTATACAGAATGCTGAATGGCCTCAAAGCGGGAG
CAAGAGCAGGAAAGAAAAAGAGTCAAAAACCTTCAGGAACGGCTTAAGCG
ACGAAAAGACCGTCTTACCCAGGGTCTTCACGACTACGCTCTCTTGGCCG
ACGCCAAGGTATATATGCTCATCCAGGACCGCCGAGGTGGCATAACGGAG
TACAGAAGCACCCCAGACCGAAAATTTCCGCCGACGTATGCACAGATTAG
GCGACTCTTCCCATCGGCCAGCCTCTTGACGCCTGAGAGCTTCGGAGTCG
CTGTCAGTCAACCAGCGAAGATTGATCAGTCCAACAAGCCTATCGAGCAC
TTTTTGGACCCGACTGCGGAGATGTTTGCAGACGGCCGAGCGATGATTGG
AGAGCCCTCCGCTCCGAGCAATAACCTTGCTCATGTCCTGCCGGAACCAA
CTCTACAAGTGGGACCCACATCGATGCCACTGCTCACGGAGACCGATGTG
CAGTCCTACTTCACTTATACAGAATGCTGAATGGCCTCAAAGCGGGAGCA
AGAGCAGGAAAGAAAAAGAGTCAAAAACCTTCAGGAACGGCTTAAGCGAC
GAAAAGACCGTCTTACCCAGGGTCTTCACGACTACGCTCTCTTGGCCGAC
GCCAAGGTATATATGCTCATCCAGGACCGCCGAGGTGGCATAACGGAGTA
CAGAAGCACCCCAGACCGAAAATTTCCGCCGACGTATGCACAGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001411KJC3_001411Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001411-T1KJC3_001411-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001411-T1.cdsKJC3_001411-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001411-T1.exon2KJC3_001411-T1.exon2Aspergillus niger KJC3exon
KJC3_001411-T1.exon1KJC3_001411-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036879
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3653854..3654406 -
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