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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3666489..3668123+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001416-T1 ID=KJC3_001416-T1|Name=KJC3_001416-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1635bp|location=Sequence derived from alignment at ch1:3666489..3668123+ (Aspergillus niger KJC3)
CTCTACTCCGTACTTATCGTTTAGTCTTCCTACCCTCCCAAAAACCCCTC
CTACCGGCTGGCCGGCCGACGCGCCTCAGCAAGCAGCCATTGACTCAAGA
GCTATTGGAAGCCTTTTAGCAGTTGTGATACAAGAATAGAGTAATTGGAG
ATGGGTAAGTGGGACCTTTCAGACACTTTAAGTATAAAAGAGTTGCACAC
CCCGTCACAAATGCGAGACACAGCTTTCTTCTCAGACAGTAACTTCAGAA
ACATTTTCTTCTTCCTTCTTATACAGCCTTAACATGAAGGTCGCAATCCT
TGGGGCCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCCTGCTGTCAT
CAACAGAAACCAAATTTGTGGGTCTCCATAGCGTCTTAAGACTCGGATTT
TGTCAAGCATTCTAATCTTCCTGTTGGAAGCAGGATATCACGGCCCTTGT
CCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGGG
GTATCAACATAGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCACA
GCCCAGCTCAAAGGCATCGACGTCCTTATTGTCTGCTGCTTACTGGACGA
AATTGTCCTTGCTAATGCAGCCAAGAAGGCAGGGGTAAAGCGCTACGTTC
CATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGAC
AACGTAAGTTGCGGCCATTTCCCCATCCTTCTCATAACGATGCATTACTT
TGACTTCAAATGACTGACATATTGCCCACATCTATAGAAGGAGGTCATAC
TAGACCATATACAGAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGT
TGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCG
CAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTT
GTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATC
GCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCG
CACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAA
TAGAAAGAAAATATGTATGTTTCCGTATCATCATCATGGTCTTTTTAAGA
AGCTAGATACTGACTTTTCACCTCGTAGCGCACCGCCGATGAGATTGATG
ATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTAC
CAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGA
ATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACC
TGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGC
TTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTC
TTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGG
GCGAAGCCTGAGTAGATGACGAATTACATGTCGTGGAGTATGCATAGGGC
CAGTCTTTTTTTTGGGTGTATCTTGCTCAGTGTTGAGAGAATCATATTTA
TATAGCTAATAGAAATGTCGAGCCTAAGCTGCTTG back to topCoding sequence (CDS) from alignment at ch1:3666489..3668123+ >KJC3_001416-T1 ID=KJC3_001416-T1|Name=KJC3_001416-T1|organism=Aspergillus niger KJC3|type=CDS|length=4056bp|location=Sequence derived from alignment at ch1:3666489..3668123+ (Aspergillus niger KJC3)
ATGAAGGTCGCAATCCTTGGGGCCACCGGCCAAAACGGCAGCTCTATCGT
CAATGGCCTGCTGTCATCAACAGAAACCAAATTTGATATCACGGCCCTTG
TCCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGG
GGTATCAACATAGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCAC
AGCCCAGCTCAAAGGCATCGACGTCCTTATTGTCTGCTGCTTACTGGACG
AAATTGTCCTTGCTAATGCAGCCAAGAAGGCAGGGGTAAAGCGCTACGTT
CCATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGA
CAACAAGGAGGTCATACTAGACCATATACAGAGGCTGCACCTTCCTTATA
CCGTCATTGACGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCTGCCC
TCCGGCCGCATTGATCGCAACCTTTTTCTCTATAATAGTGCTATTGGAGG
CAGCGGTGACGTACCTTGTGCCAGGACCGATTCCCGCGATGTTGGCGTAT
ATGTTGCTCGTATCATCGCCGACCCTAGGACCCTTAACCAGAAGGTCTTC
GCCTATACCGACCTCCGCACTCAGCACGAGCTGTATGATACAGTTGAGAA
AATCAGCGGCGAGAAAATAGAAAGAAAATATCGCACCGCCGATGAGATTG
ATGATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTAC
TACCAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATACACC
CGAATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCG
ACCTGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACT
GGCTTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAG
CTCTTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACA
GGGGCGAAGCCTGAATGAAGGTCGCAATCCTTGGGGCCACCGGCCAAAAC
GGCAGCTCTATCGTCAATGGCCTGCTGTCATCAACAGAAACCAAATTTGA
TATCACGGCCCTTGTCCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCA
ACCTACAGAAGAGGGGTATCAACATAGTGTCATTTAGCCTTGCCGACTCT
GAGGATGATATCACAGCCCAGCTCAAAGGCATCGACGTCCTTATTGTCTG
CTGCTTACTGGACGAAATTGTCCTTGCTAATGCAGCCAAGAAGGCAGGGG
TAAAGCGCTACGTTCCATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTC
CAGACGTTGCGCGACAACAAGGAGGTCATACTAGACCATATACAGAGGCT
GCACCTTCCTTATACCGTCATTGACGTCGGTTGGTGGTACCAGATCAGCC
TTCCCCGCCTGCCCTCCGGCCGCATTGATCGCAACCTTTTTCTCTATAAT
AGTGCTATTGGAGGCAGCGGTGACGTACCTTGTGCCAGGACCGATTCCCG
CGATGTTGGCGTATATGTTGCTCGTATCATCGCCGACCCTAGGACCCTTA
ACCAGAAGGTCTTCGCCTATACCGACCTCCGCACTCAGCACGAGCTGTAT
GATACAGTTGAGAAAATCAGCGGCGAGAAAATAGAAAGAAAATATCGCAC
CGCCGATGAGATTGATGATGGTATTGCCAGAACCAAAGATGATCCCTACA
AGATGATGGATTACTACCAGTTCACCTACCAAAAGTCATACGACATTATG
GGAGAAAATACACCCGAATACGCTCGCTATCTAGGCTACCAGGTCGGTAA
GGACCTCTACCCCGACCTGGAAGGAATCTCTTTCGAAGATTTCTTCAAGG
AGACGTTGGAAACTGGCTTGAAGCCTATGTATGAAGAACATGCAGATTTT
CTGCGGGAATCCAGCTCTTTCATTTTCAAGGGTGAAGCCACAATGAGTCA
TGGGGATCAATACAGGGGCGAAGCCTGAATGAAGGTCGCAATCCTTGGGG
CCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCCTGCTGTCATCAACA
GAAACCAAATTTGATATCACGGCCCTTGTCCGACCTACTTCGCTAAAGAA
GCCCAATGTGCTCAACCTACAGAAGAGGGGTATCAACATAGTGTCATTTA
GCCTTGCCGACTCTGAGGATGATATCACAGCCCAGCTCAAAGGCATCGAC
GTCCTTATTGTCTGCTGCTTACTGGACGAAATTGTCCTTGCTAATGCAGC
CAAGAAGGCAGGGGTAAAGCGCTACGTTCCATGCTTTTATGCTTCAGTGA
TGCCTAGGGGCGTCCAGACGTTGCGCGACAACAAGGAGGTCATACTAGAC
CATATACAGAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGTTGGTG
GTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCGCAACC
TTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTTGTGCC
AGGACCGATTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATCGCCGA
CCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCGCACTC
AGCACGAGCTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAATAGAA
AGAAAATATCGCACCGCCGATGAGATTGATGATGGTATTGCCAGAACCAA
AGATGATCCCTACAAGATGATGGATTACTACCAGTTCACCTACCAAAAGT
CATACGACATTATGGGAGAAAATACACCCGAATACGCTCGCTATCTAGGC
TACCAGGTCGGTAAGGACCTCTACCCCGACCTGGAAGGAATCTCTTTCGA
AGATTTCTTCAAGGAGACGTTGGAAACTGGCTTGAAGCCTATGTATGAAG
AACATGCAGATTTTCTGCGGGAATCCAGCTCTTTCATTTTCAAGGGTGAA
GCCACAATGAGTCATGGGGATCAATACAGGGGCGAAGCCTGAATGAAGGT
CGCAATCCTTGGGGCCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCC
TGCTGTCATCAACAGAAACCAAATTTGATATCACGGCCCTTGTCCGACCT
ACTTCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGGGGTATCAA
CATAGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCACAGCCCAGC
TCAAAGGCATCGACGTCCTTATTGTCTGCTGCTTACTGGACGAAATTGTC
CTTGCTAATGCAGCCAAGAAGGCAGGGGTAAAGCGCTACGTTCCATGCTT
TTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGACAACAAGG
AGGTCATACTAGACCATATACAGAGGCTGCACCTTCCTTATACCGTCATT
GACGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCG
CATTGATCGCAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTG
ACGTACCTTGTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTTGCT
CGTATCATCGCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATAC
CGACCTCCGCACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCAGCG
GCGAGAAAATAGAAAGAAAATATCGCACCGCCGATGAGATTGATGATGGT
ATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTACCAGTT
CACCTACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGAATACG
CTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACCTGGAA
GGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGCTTGAA
GCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTCTTTCA
TTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGGGCGAA
GCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001416-T1.utr5p1 | KJC3_001416-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001416-T1.utr3p1 | KJC3_001416-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3666489..3668123 + |
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