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KJC3_001416-T2, KJC3_001416-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001416-T2
Unique NameKJC3_001416-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3666489..3668123+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001416-T2 ID=KJC3_001416-T2|Name=KJC3_001416-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1635bp|location=Sequence derived from alignment at ch1:3666489..3668123+ (Aspergillus niger KJC3)
CTCTACTCCGTACTTATCGTTTAGTCTTCCTACCCTCCCAAAAACCCCTC
CTACCGGCTGGCCGGCCGACGCGCCTCAGCAAGCAGCCATTGACTCAAGA
GCTATTGGAAGCCTTTTAGCAGTTGTGATACAAGAATAGAGTAATTGGAG
ATGGGTAAGTGGGACCTTTCAGACACTTTAAGTATAAAAGAGTTGCACAC
CCCGTCACAAATGCGAGACACAGCTTTCTTCTCAGACAGTAACTTCAGAA
ACATTTTCTTCTTCCTTCTTATACAGCCTTAACATGAAGGTCGCAATCCT
TGGGGCCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCCTGCTGTCAT
CAACAGAAACCAAATTTGTGGGTCTCCATAGCGTCTTAAGACTCGGATTT
TGTCAAGCATTCTAATCTTCCTGTTGGAAGCAGGATATCACGGCCCTTGT
CCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGGG
GTATCAACATAGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCACA
GCCCAGCTCAAAGGCATCGACGTCCTTATTGTCTGCTGCTTACTGGACGA
AATTGTCCTTGCTAATGCAGCCAAGAAGGCAGGGGTAAAGCGCTACGTTC
CATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGAC
AACGTAAGTTGCGGCCATTTCCCCATCCTTCTCATAACGATGCATTACTT
TGACTTCAAATGACTGACATATTGCCCACATCTATAGAAGGAGGTCATAC
TAGACCATATACAGAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGT
TGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCG
CAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTT
GTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATC
GCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCG
CACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAA
TAGAAAGAAAATATGTATGTTTCCGTATCATCATCATGGTCTTTTTAAGA
AGCTAGATACTGACTTTTCACCTCGTAGCGCACCGCCGATGAGATTGATG
ATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTAC
CAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGA
ATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACC
TGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGC
TTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTC
TTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGG
GCGAAGCCTGAGTAGATGACGAATTACATGTCGTGGAGTATGCATAGGGC
CAGTCTTTTTTTTGGGTGTATCTTGCTCAGTGTTGAGAGAATCATATTTA
TATAGCTAATAGAAATGTCGAGCCTAAGCTGCTTG
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Coding sequence (CDS) from alignment at ch1:3666489..3668123+

>KJC3_001416-T2 ID=KJC3_001416-T2|Name=KJC3_001416-T2|organism=Aspergillus niger KJC3|type=CDS|length=3036bp|location=Sequence derived from alignment at ch1:3666489..3668123+ (Aspergillus niger KJC3)
ATGATATCACAGCCCAGCTCAAAGGCAGGGGTAAAGCGCTACGTTCCATG
CTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGACAACA
AGGAGGTCATACTAGACCATATACAGAGGCTGCACCTTCCTTATACCGTC
ATTGACGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGG
CCGCATTGATCGCAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCG
GTGACGTACCTTGTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTT
GCTCGTATCATCGCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTA
TACCGACCTCCGCACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCA
GCGGCGAGAAAATAGAAAGAAAATATCGCACCGCCGATGAGATTGATGAT
GGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTACCA
GTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGAAT
ACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACCTG
GAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGCTT
GAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTCTT
TCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGGGC
GAAGCCTGAATGATATCACAGCCCAGCTCAAAGGCAGGGGTAAAGCGCTA
CGTTCCATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGC
GCGACAACAAGGAGGTCATACTAGACCATATACAGAGGCTGCACCTTCCT
TATACCGTCATTGACGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCT
GCCCTCCGGCCGCATTGATCGCAACCTTTTTCTCTATAATAGTGCTATTG
GAGGCAGCGGTGACGTACCTTGTGCCAGGACCGATTCCCGCGATGTTGGC
GTATATGTTGCTCGTATCATCGCCGACCCTAGGACCCTTAACCAGAAGGT
CTTCGCCTATACCGACCTCCGCACTCAGCACGAGCTGTATGATACAGTTG
AGAAAATCAGCGGCGAGAAAATAGAAAGAAAATATCGCACCGCCGATGAG
ATTGATGATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGA
TTACTACCAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATA
CACCCGAATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTAC
CCCGACCTGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGA
AACTGGCTTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAAT
CCAGCTCTTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAA
TACAGGGGCGAAGCCTGAATGATATCACAGCCCAGCTCAAAGGCAGGGGT
AAAGCGCTACGTTCCATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCC
AGACGTTGCGCGACAACAAGGAGGTCATACTAGACCATATACAGAGGCTG
CACCTTCCTTATACCGTCATTGACGTCGGTTGGTGGTACCAGATCAGCCT
TCCCCGCCTGCCCTCCGGCCGCATTGATCGCAACCTTTTTCTCTATAATA
GTGCTATTGGAGGCAGCGGTGACGTACCTTGTGCCAGGACCGATTCCCGC
GATGTTGGCGTATATGTTGCTCGTATCATCGCCGACCCTAGGACCCTTAA
CCAGAAGGTCTTCGCCTATACCGACCTCCGCACTCAGCACGAGCTGTATG
ATACAGTTGAGAAAATCAGCGGCGAGAAAATAGAAAGAAAATATCGCACC
GCCGATGAGATTGATGATGGTATTGCCAGAACCAAAGATGATCCCTACAA
GATGATGGATTACTACCAGTTCACCTACCAAAAGTCATACGACATTATGG
GAGAAAATACACCCGAATACGCTCGCTATCTAGGCTACCAGGTCGGTAAG
GACCTCTACCCCGACCTGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGA
GACGTTGGAAACTGGCTTGAAGCCTATGTATGAAGAACATGCAGATTTTC
TGCGGGAATCCAGCTCTTTCATTTTCAAGGGTGAAGCCACAATGAGTCAT
GGGGATCAATACAGGGGCGAAGCCTGAATGATATCACAGCCCAGCTCAAA
GGCAGGGGTAAAGCGCTACGTTCCATGCTTTTATGCTTCAGTGATGCCTA
GGGGCGTCCAGACGTTGCGCGACAACAAGGAGGTCATACTAGACCATATA
CAGAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGTTGGTGGTACCA
GATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCGCAACCTTTTTC
TCTATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTTGTGCCAGGACC
GATTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATCGCCGACCCTAG
GACCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCGCACTCAGCACG
AGCTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAATAGAAAGAAAA
TATCGCACCGCCGATGAGATTGATGATGGTATTGCCAGAACCAAAGATGA
TCCCTACAAGATGATGGATTACTACCAGTTCACCTACCAAAAGTCATACG
ACATTATGGGAGAAAATACACCCGAATACGCTCGCTATCTAGGCTACCAG
GTCGGTAAGGACCTCTACCCCGACCTGGAAGGAATCTCTTTCGAAGATTT
CTTCAAGGAGACGTTGGAAACTGGCTTGAAGCCTATGTATGAAGAACATG
CAGATTTTCTGCGGGAATCCAGCTCTTTCATTTTCAAGGGTGAAGCCACA
ATGAGTCATGGGGATCAATACAGGGGCGAAGCCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001416KJC3_001416Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001416-T2KJC3_001416-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001416-T2.utr5p1KJC3_001416-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_001416-T2.utr5p2KJC3_001416-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001416-T2.exon1KJC3_001416-T2.exon1Aspergillus niger KJC3exon
KJC3_001416-T2.exon2KJC3_001416-T2.exon2Aspergillus niger KJC3exon
KJC3_001416-T2.exon3KJC3_001416-T2.exon3Aspergillus niger KJC3exon
KJC3_001416-T2.exon4KJC3_001416-T2.exon4Aspergillus niger KJC3exon
KJC3_001416-T2.exon5KJC3_001416-T2.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001416-T2.cdsKJC3_001416-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001416-T2.utr3p1KJC3_001416-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3666489..3668123 +
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