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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3666489..3668123+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001416-T3 ID=KJC3_001416-T3|Name=KJC3_001416-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1635bp|location=Sequence derived from alignment at ch1:3666489..3668123+ (Aspergillus niger KJC3)
CTCTACTCCGTACTTATCGTTTAGTCTTCCTACCCTCCCAAAAACCCCTC
CTACCGGCTGGCCGGCCGACGCGCCTCAGCAAGCAGCCATTGACTCAAGA
GCTATTGGAAGCCTTTTAGCAGTTGTGATACAAGAATAGAGTAATTGGAG
ATGGGTAAGTGGGACCTTTCAGACACTTTAAGTATAAAAGAGTTGCACAC
CCCGTCACAAATGCGAGACACAGCTTTCTTCTCAGACAGTAACTTCAGAA
ACATTTTCTTCTTCCTTCTTATACAGCCTTAACATGAAGGTCGCAATCCT
TGGGGCCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCCTGCTGTCAT
CAACAGAAACCAAATTTGTGGGTCTCCATAGCGTCTTAAGACTCGGATTT
TGTCAAGCATTCTAATCTTCCTGTTGGAAGCAGGATATCACGGCCCTTGT
CCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGGG
GTATCAACATAGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCACA
GCCCAGCTCAAAGGCATCGACGTCCTTATTGTCTGCTGCTTACTGGACGA
AATTGTCCTTGCTAATGCAGCCAAGAAGGCAGGGGTAAAGCGCTACGTTC
CATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGAC
AACGTAAGTTGCGGCCATTTCCCCATCCTTCTCATAACGATGCATTACTT
TGACTTCAAATGACTGACATATTGCCCACATCTATAGAAGGAGGTCATAC
TAGACCATATACAGAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGT
TGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCG
CAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTT
GTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATC
GCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCG
CACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAA
TAGAAAGAAAATATGTATGTTTCCGTATCATCATCATGGTCTTTTTAAGA
AGCTAGATACTGACTTTTCACCTCGTAGCGCACCGCCGATGAGATTGATG
ATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTAC
CAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGA
ATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACC
TGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGC
TTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTC
TTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGG
GCGAAGCCTGAGTAGATGACGAATTACATGTCGTGGAGTATGCATAGGGC
CAGTCTTTTTTTTGGGTGTATCTTGCTCAGTGTTGAGAGAATCATATTTA
TATAGCTAATAGAAATGTCGAGCCTAAGCTGCTTG back to topCoding sequence (CDS) from alignment at ch1:3666489..3668123+ >KJC3_001416-T3 ID=KJC3_001416-T3|Name=KJC3_001416-T3|organism=Aspergillus niger KJC3|type=CDS|length=5904bp|location=Sequence derived from alignment at ch1:3666489..3668123+ (Aspergillus niger KJC3)
ATGGAAACATTTTCTTCTTCCTTCTTATACAGCCTTAACATGAAGGTCGC
AATCCTTGGGGCCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCCTGC
TGTCATCAACAGAAACCAAATTTGATATCACGGCCCTTGTCCGACCTACT
TCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGGGGTATCAACAT
AGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCACAGCCCAGCTCA
AAGGGGTAAAGCGCTACGTTCCATGCTTTTATGCTTCAGTGATGCCTAGG
GGCGTCCAGACGTTGCGCGACAACAAGGAGGTCATACTAGACCATATACA
GAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGTTGGTGGTACCAGA
TCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCGCAACCTTTTTCTC
TATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTTGTGCCAGGACCGA
TTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATCGCCGACCCTAGGA
CCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCGCACTCAGCACGAG
CTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAATAGAAAGAAAATA
TCGCACCGCCGATGAGATTGATGATGGTATTGCCAGAACCAAAGATGATC
CCTACAAGATGATGGATTACTACCAGTTCACCTACCAAAAGTCATACGAC
ATTATGGGAGAAAATACACCCGAATACGCTCGCTATCTAGGCTACCAGGT
CGGTAAGGACCTCTACCCCGACCTGGAAGGAATCTCTTTCGAAGATTTCT
TCAAGGAGACGTTGGAAACTGGCTTGAAGCCTATGTATGAAGAACATGCA
GATTTTCTGCGGGAATCCAGCTCTTTCATTTTCAAGGGTGAAGCCACAAT
GAGTCATGGGGATCAATACAGGGGCGAAGCCTGAATGGAAACATTTTCTT
CTTCCTTCTTATACAGCCTTAACATGAAGGTCGCAATCCTTGGGGCCACC
GGCCAAAACGGCAGCTCTATCGTCAATGGCCTGCTGTCATCAACAGAAAC
CAAATTTGATATCACGGCCCTTGTCCGACCTACTTCGCTAAAGAAGCCCA
ATGTGCTCAACCTACAGAAGAGGGGTATCAACATAGTGTCATTTAGCCTT
GCCGACTCTGAGGATGATATCACAGCCCAGCTCAAAGGGGTAAAGCGCTA
CGTTCCATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGC
GCGACAACAAGGAGGTCATACTAGACCATATACAGAGGCTGCACCTTCCT
TATACCGTCATTGACGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCT
GCCCTCCGGCCGCATTGATCGCAACCTTTTTCTCTATAATAGTGCTATTG
GAGGCAGCGGTGACGTACCTTGTGCCAGGACCGATTCCCGCGATGTTGGC
GTATATGTTGCTCGTATCATCGCCGACCCTAGGACCCTTAACCAGAAGGT
CTTCGCCTATACCGACCTCCGCACTCAGCACGAGCTGTATGATACAGTTG
AGAAAATCAGCGGCGAGAAAATAGAAAGAAAATATCGCACCGCCGATGAG
ATTGATGATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATGGA
TTACTACCAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAATA
CACCCGAATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTAC
CCCGACCTGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGA
AACTGGCTTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGAAT
CCAGCTCTTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAA
TACAGGGGCGAAGCCTGAATGGAAACATTTTCTTCTTCCTTCTTATACAG
CCTTAACATGAAGGTCGCAATCCTTGGGGCCACCGGCCAAAACGGCAGCT
CTATCGTCAATGGCCTGCTGTCATCAACAGAAACCAAATTTGATATCACG
GCCCTTGTCCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCAACCTACA
GAAGAGGGGTATCAACATAGTGTCATTTAGCCTTGCCGACTCTGAGGATG
ATATCACAGCCCAGCTCAAAGGGGTAAAGCGCTACGTTCCATGCTTTTAT
GCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGACAACAAGGAGGT
CATACTAGACCATATACAGAGGCTGCACCTTCCTTATACCGTCATTGACG
TCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATT
GATCGCAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTGACGT
ACCTTGTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTTGCTCGTA
TCATCGCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATACCGAC
CTCCGCACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCAGCGGCGA
GAAAATAGAAAGAAAATATCGCACCGCCGATGAGATTGATGATGGTATTG
CCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTACCAGTTCACC
TACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGAATACGCTCG
CTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACCTGGAAGGAA
TCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGCTTGAAGCCT
ATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTCTTTCATTTT
CAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGGGCGAAGCCT
GAATGGAAACATTTTCTTCTTCCTTCTTATACAGCCTTAACATGAAGGTC
GCAATCCTTGGGGCCACCGGCCAAAACGGCAGCTCTATCGTCAATGGCCT
GCTGTCATCAACAGAAACCAAATTTGATATCACGGCCCTTGTCCGACCTA
CTTCGCTAAAGAAGCCCAATGTGCTCAACCTACAGAAGAGGGGTATCAAC
ATAGTGTCATTTAGCCTTGCCGACTCTGAGGATGATATCACAGCCCAGCT
CAAAGGGGTAAAGCGCTACGTTCCATGCTTTTATGCTTCAGTGATGCCTA
GGGGCGTCCAGACGTTGCGCGACAACAAGGAGGTCATACTAGACCATATA
CAGAGGCTGCACCTTCCTTATACCGTCATTGACGTCGGTTGGTGGTACCA
GATCAGCCTTCCCCGCCTGCCCTCCGGCCGCATTGATCGCAACCTTTTTC
TCTATAATAGTGCTATTGGAGGCAGCGGTGACGTACCTTGTGCCAGGACC
GATTCCCGCGATGTTGGCGTATATGTTGCTCGTATCATCGCCGACCCTAG
GACCCTTAACCAGAAGGTCTTCGCCTATACCGACCTCCGCACTCAGCACG
AGCTGTATGATACAGTTGAGAAAATCAGCGGCGAGAAAATAGAAAGAAAA
TATCGCACCGCCGATGAGATTGATGATGGTATTGCCAGAACCAAAGATGA
TCCCTACAAGATGATGGATTACTACCAGTTCACCTACCAAAAGTCATACG
ACATTATGGGAGAAAATACACCCGAATACGCTCGCTATCTAGGCTACCAG
GTCGGTAAGGACCTCTACCCCGACCTGGAAGGAATCTCTTTCGAAGATTT
CTTCAAGGAGACGTTGGAAACTGGCTTGAAGCCTATGTATGAAGAACATG
CAGATTTTCTGCGGGAATCCAGCTCTTTCATTTTCAAGGGTGAAGCCACA
ATGAGTCATGGGGATCAATACAGGGGCGAAGCCTGAATGGAAACATTTTC
TTCTTCCTTCTTATACAGCCTTAACATGAAGGTCGCAATCCTTGGGGCCA
CCGGCCAAAACGGCAGCTCTATCGTCAATGGCCTGCTGTCATCAACAGAA
ACCAAATTTGATATCACGGCCCTTGTCCGACCTACTTCGCTAAAGAAGCC
CAATGTGCTCAACCTACAGAAGAGGGGTATCAACATAGTGTCATTTAGCC
TTGCCGACTCTGAGGATGATATCACAGCCCAGCTCAAAGGGGTAAAGCGC
TACGTTCCATGCTTTTATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTT
GCGCGACAACAAGGAGGTCATACTAGACCATATACAGAGGCTGCACCTTC
CTTATACCGTCATTGACGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGC
CTGCCCTCCGGCCGCATTGATCGCAACCTTTTTCTCTATAATAGTGCTAT
TGGAGGCAGCGGTGACGTACCTTGTGCCAGGACCGATTCCCGCGATGTTG
GCGTATATGTTGCTCGTATCATCGCCGACCCTAGGACCCTTAACCAGAAG
GTCTTCGCCTATACCGACCTCCGCACTCAGCACGAGCTGTATGATACAGT
TGAGAAAATCAGCGGCGAGAAAATAGAAAGAAAATATCGCACCGCCGATG
AGATTGATGATGGTATTGCCAGAACCAAAGATGATCCCTACAAGATGATG
GATTACTACCAGTTCACCTACCAAAAGTCATACGACATTATGGGAGAAAA
TACACCCGAATACGCTCGCTATCTAGGCTACCAGGTCGGTAAGGACCTCT
ACCCCGACCTGGAAGGAATCTCTTTCGAAGATTTCTTCAAGGAGACGTTG
GAAACTGGCTTGAAGCCTATGTATGAAGAACATGCAGATTTTCTGCGGGA
ATCCAGCTCTTTCATTTTCAAGGGTGAAGCCACAATGAGTCATGGGGATC
AATACAGGGGCGAAGCCTGAATGGAAACATTTTCTTCTTCCTTCTTATAC
AGCCTTAACATGAAGGTCGCAATCCTTGGGGCCACCGGCCAAAACGGCAG
CTCTATCGTCAATGGCCTGCTGTCATCAACAGAAACCAAATTTGATATCA
CGGCCCTTGTCCGACCTACTTCGCTAAAGAAGCCCAATGTGCTCAACCTA
CAGAAGAGGGGTATCAACATAGTGTCATTTAGCCTTGCCGACTCTGAGGA
TGATATCACAGCCCAGCTCAAAGGGGTAAAGCGCTACGTTCCATGCTTTT
ATGCTTCAGTGATGCCTAGGGGCGTCCAGACGTTGCGCGACAACAAGGAG
GTCATACTAGACCATATACAGAGGCTGCACCTTCCTTATACCGTCATTGA
CGTCGGTTGGTGGTACCAGATCAGCCTTCCCCGCCTGCCCTCCGGCCGCA
TTGATCGCAACCTTTTTCTCTATAATAGTGCTATTGGAGGCAGCGGTGAC
GTACCTTGTGCCAGGACCGATTCCCGCGATGTTGGCGTATATGTTGCTCG
TATCATCGCCGACCCTAGGACCCTTAACCAGAAGGTCTTCGCCTATACCG
ACCTCCGCACTCAGCACGAGCTGTATGATACAGTTGAGAAAATCAGCGGC
GAGAAAATAGAAAGAAAATATCGCACCGCCGATGAGATTGATGATGGTAT
TGCCAGAACCAAAGATGATCCCTACAAGATGATGGATTACTACCAGTTCA
CCTACCAAAAGTCATACGACATTATGGGAGAAAATACACCCGAATACGCT
CGCTATCTAGGCTACCAGGTCGGTAAGGACCTCTACCCCGACCTGGAAGG
AATCTCTTTCGAAGATTTCTTCAAGGAGACGTTGGAAACTGGCTTGAAGC
CTATGTATGAAGAACATGCAGATTTTCTGCGGGAATCCAGCTCTTTCATT
TTCAAGGGTGAAGCCACAATGAGTCATGGGGATCAATACAGGGGCGAAGC
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001416-T3.utr5p1 | KJC3_001416-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001416-T3.utr3p1 | KJC3_001416-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3666489..3668123 + |
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