You are here

Home

KJC3_001417-T1, KJC3_001417-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001417-T1
Unique NameKJC3_001417-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3669597..3671411+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001417-T1 ID=KJC3_001417-T1|Name=KJC3_001417-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1815bp|location=Sequence derived from alignment at ch1:3669597..3671411+ (Aspergillus niger KJC3)
CTGCTGTACTTTAGAAGGACCTGGCAAGCTATATACAATACTTTGCGATG
TCCGGGATAGATAGCGGCAACATCCGCGATATATCCAAATCCGCATATCC
GCGGATAGACCTAAAATTATATATCACACGGCAGGAGGAACTGACAAGGA
CATTAGCCGAGATCAACAATCGGCCTCCGTACGGACCCCGCGGAAGCCGT
CTGGATCTACCTTCCACACTGGTCCCAGTCCCATTCCGCTGTTGTACTTC
TGCTTTCCCCTCCTTCACTATCCTATCTATCTTCATTGAAAATATCCTCT
ATGCAGTCCAGCTCTACAGTCACCGTCCTCACCACGCACAAAGTGCAATG
CGCAGATCGAGGCAGTCTTGCGCAGATTGCTTGTCCTTTCCCGCTGGGCC
CTTTCGACCATTTGCTGCCACCGTTCGCCGCAATTGCTGTTGTCTTTGTG
TGGCGGCAACCACGCGAAGCTAGTTTCCCTATGATTTCCTTCAACCTTCT
GCACACGGCGCTTGCGCGGTTGCTGGACTTCTATCCACACCTGACCGGTC
GCGTGAATATCAATGATAAGGATAAAACTCCCGAAATCCGCCAACTAGGC
GAAGGCGCAGAGTTACATAGCGCGGTATGTGAGACAGCGCTCCCTCAATG
TATGGCCCCAGAGGATATGCCAGGACAGGGCAACGCGCTGCTTGCAAAAT
TCAACGGCTCGCCGGAGTGCTTCTCGAACGAGCCAATACTGAGCATCCAA
CATACGCGATTCCGGTGTGGCTCTGTCTCCCTGGGTGTACGTGTAAACCA
CACTGTCTGTGACGCACATGGCTTTGTGCAACTGATGGAAGATCTCGCCG
AGATTTACCGGAGGCTGCATGCAGAAAGGCTTGGGGCAATGAGCATACCT
CTGCAAAAGGTGCAGGCACAGCAGCAGCCTTGCATCACGTCTTATTTATC
TGATGTTGTGCTAAGTCCGCAGGAAGCCAGCAAAGCATTGAAAGTACAGC
CAGTTGATTATCATGTACAACCAGCACCGACAGTGATGACATTCAAGTCA
AACAAACCCATCACTGGAAAGCTGCTGCAATTTACCCGAGATCAACTCTG
CGCAATCAAGAAGGCCGCGACTGACCCCACGCGAGGCCAATATGTTTCGA
CTTTCGAAGCACTCACGGCCCATCTCTGGCTGAGTATTCAGCGAGCACGA
ACTCAGTGCGGTCCAAGCAAGGCAACTATAGATTGTTGCGACGAGACTGC
GGATCTACTCACCTCAATCGATTGGAGATCGCCATCTCGCCTGAACCTTC
CACCACGGTATTTCCCGAACGCAGTCTCAGAGCCGTACATTACGTTGCCG
CTCAATAACATTTCCAGTAACGCCTTACCGCAAACAGCCCAAATCATACA
TGAAACCTTAAAAGCCAGAAGTCCAGCAGATCAGCATAAAACCTTACAAT
GGGTCAAAGCACAGCCAAACAAGTCTAAGATCAGTCTCCGGGCCCGATTG
AACGAGAAAGGCTTCATTATCAGCCAGTGGAACAAGCTCAATATGTACGC
GATTCATTTTGACAACGATAACCAGGGCAACCGTATACTCCCAGATCGAA
TCTGGCCCCCATTCACGGAGAATTCGTTGGTAGATGGCCTCGCCTATCTG
CTCCCAACAAAACCTGTAGCGAGCACTGACGATTTTAACCGACACTCGGA
CATAGAGGTTGCCCTATCATTGCATGAGCCGCTGTGGGATGTTCTTGGAA
ACGACACACAGTTTACACAGTTTCTTAAATCATAGAGGCATGCCTCTCTA
TCAGACGTATCTCAC
back to top

Coding sequence (CDS) from alignment at ch1:3669597..3671411+

>KJC3_001417-T1 ID=KJC3_001417-T1|Name=KJC3_001417-T1|organism=Aspergillus niger KJC3|type=CDS|length=1485bp|location=Sequence derived from alignment at ch1:3669597..3671411+ (Aspergillus niger KJC3)
ATGCAGTCCAGCTCTACAGTCACCGTCCTCACCACGCACAAAGTGCAATG
CGCAGATCGAGGCAGTCTTGCGCAGATTGCTTGTCCTTTCCCGCTGGGCC
CTTTCGACCATTTGCTGCCACCGTTCGCCGCAATTGCTGTTGTCTTTGTG
TGGCGGCAACCACGCGAAGCTAGTTTCCCTATGATTTCCTTCAACCTTCT
GCACACGGCGCTTGCGCGGTTGCTGGACTTCTATCCACACCTGACCGGTC
GCGTGAATATCAATGATAAGGATAAAACTCCCGAAATCCGCCAACTAGGC
GAAGGCGCAGAGTTACATAGCGCGGTATGTGAGACAGCGCTCCCTCAATG
TATGGCCCCAGAGGATATGCCAGGACAGGGCAACGCGCTGCTTGCAAAAT
TCAACGGCTCGCCGGAGTGCTTCTCGAACGAGCCAATACTGAGCATCCAA
CATACGCGATTCCGGTGTGGCTCTGTCTCCCTGGGTGTACGTGTAAACCA
CACTGTCTGTGACGCACATGGCTTTGTGCAACTGATGGAAGATCTCGCCG
AGATTTACCGGAGGCTGCATGCAGAAAGGCTTGGGGCAATGAGCATACCT
CTGCAAAAGGTGCAGGCACAGCAGCAGCCTTGCATCACGTCTTATTTATC
TGATGTTGTGCTAAGTCCGCAGGAAGCCAGCAAAGCATTGAAAGTACAGC
CAGTTGATTATCATGTACAACCAGCACCGACAGTGATGACATTCAAGTCA
AACAAACCCATCACTGGAAAGCTGCTGCAATTTACCCGAGATCAACTCTG
CGCAATCAAGAAGGCCGCGACTGACCCCACGCGAGGCCAATATGTTTCGA
CTTTCGAAGCACTCACGGCCCATCTCTGGCTGAGTATTCAGCGAGCACGA
ACTCAGTGCGGTCCAAGCAAGGCAACTATAGATTGTTGCGACGAGACTGC
GGATCTACTCACCTCAATCGATTGGAGATCGCCATCTCGCCTGAACCTTC
CACCACGGTATTTCCCGAACGCAGTCTCAGAGCCGTACATTACGTTGCCG
CTCAATAACATTTCCAGTAACGCCTTACCGCAAACAGCCCAAATCATACA
TGAAACCTTAAAAGCCAGAAGTCCAGCAGATCAGCATAAAACCTTACAAT
GGGTCAAAGCACAGCCAAACAAGTCTAAGATCAGTCTCCGGGCCCGATTG
AACGAGAAAGGCTTCATTATCAGCCAGTGGAACAAGCTCAATATGTACGC
GATTCATTTTGACAACGATAACCAGGGCAACCGTATACTCCCAGATCGAA
TCTGGCCCCCATTCACGGAGAATTCGTTGGTAGATGGCCTCGCCTATCTG
CTCCCAACAAAACCTGTAGCGAGCACTGACGATTTTAACCGACACTCGGA
CATAGAGGTTGCCCTATCATTGCATGAGCCGCTGTGGGATGTTCTTGGAA
ACGACACACAGTTTACACAGTTTCTTAAATCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001417KJC3_001417Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001417-T1.utr5p1KJC3_001417-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001417-T1.exon1KJC3_001417-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001417-T1.cdsKJC3_001417-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001417-T1.utr3p1KJC3_001417-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001417-T1KJC3_001417-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003480
DBxrefInterPro:IPR023213
DBxrefPFAM:PF02458
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3669597..3671411 +
Powered by Drupal