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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3720477..3722126- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001430-T1 ID=KJC3_001430-T1|Name=KJC3_001430-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1650bp|location=Sequence derived from alignment at ch1:3720477..3722126- (Aspergillus niger KJC3)
ATGAAGTGGACATGGACCAACAGGGGTATGAATATATTAATAGTGGGGGA
ATAAATGAAAAGGCTCTTATACATTCTTTATCTGTTGAAGAGAATGCACT
TGGGCACCCCGGCAGTTCAGATTCAGCGGAGCACTTGAGTTCTGCCGATC
ATCAACAGGAGTGGCAGCAAGCTATGGAGCATGGCTTCAACGTATGTGTC
AGCATAGGCCGGAGTTTTCATAACTTCTAACCCAATCATACAGCTAGATA
TTGTTCTTCTTAGACACTTTGGTACGGCTCAAGGGTTGGTCCGGCAAGGA
CCAATCATTCACAACCTAGCCCCAAATTCCACGGGTACTAGACTCCGGAG
GGCACATCCCTGCGTCCAGGGGATCTCCATCTGGAGGCCTATTAGAGGGG
GCCTCGGGGCAGAGAACGGTCTCTTCAAAGTCTATCCCGGATCCCAAGGG
ATCAGAACAGAAAATGAGCTGCGAGATAGTCAAATCAGCACACTTGAAAT
ACGAATCCGTGCTGATCAGGTCTTTATTGCACATGGCGGGCTCTGGATAG
AGGAAGGTAACGGGAACGGCATCCTGATGTGGATGGGAGTGTCGGCGGAT
ATCATTGGTCTATACATTGACAAATACTGCCTACCTTTCGTTGCAGGAGC
GTACAATGCCTCGAGATTCCTTTCGCGAACAGTGCCACCCGGGCTGGTCA
AAGCAGAGACTCAGGCAACTCTAGCCGACTCCTTTTTCCCGCAAGAGAGG
CTAGTAAGGGCAGGCAACCATCGCTCGAACACTGCGGACGTGTTCCTCCG
TAGTGCGATACCTTACACCTCCCGGATTCTGGAGTATTTTACGAACCTGG
ATCCGACCGGTATAATCCTGGCAGCTTGTCCCGCTGGTGAAGATCCGAGG
ATGGCATTTCTCACCGTGGACCGGGGTACTGACATAAGGAAATGGTTTCT
TCGCGCTCTTGCTGTACGATGTCTCATTCGGCGCCATCATTCGAGAGGTG
GTACAATAGAGGATTTTATCCGGGCGGACGGACTACCCAAAACATCACGG
TTAATCAACACTATTAGGCACGGTAAAAAGCTGTATTGGATAGAGTTATC
ATTGAGAAAGTCGGGTATCTGGATTGCCCTCCTGAATGTAATGTCTCGGC
TTGATCATATCACCTGGGAAGAGGTATTCTCCATACCGGACTCGATACAC
CGGTACCCAACACTTTTGGAAATCCCGGAAGAATGGTCTCCACTTATGGA
GGGTTGCACTCAGTTGTTGGGCTCACTCGCGCCTCCGGGCGCCTCTGATG
GATGCGTCACCCCCGGTCAGAGTTTTGATTAATTAGTTAGGTCAATCAAT
AAGAGGGACTGGTGTCGCAGGCAGACCCGCACTTGTCGCTGAGTGGGGCT
CATCGAAAATGAGCCTACAGGCCAGGGCGGCCACCCCTTGCTCGACCCGA
TTCACACAATCAATGACACATTACCAGTCACAGACTTAAGAGAGGTGGCC
TAGAGCAGGACATATGCTGGATCGCTTAGAAACCACCCGAGAACACAACC
AATAGAAGGTGATCAGCTGCTTGGTATTGCGCAATTCCTTGGGAGACTGA
CAAGCCCCCGTCCACCTCCCATTATCCGTGTCCGGAATAGTTCAGTGTGG
back to topCoding sequence (CDS) from alignment at ch1:3720477..3722126- >KJC3_001430-T1 ID=KJC3_001430-T1|Name=KJC3_001430-T1|organism=Aspergillus niger KJC3|type=CDS|length=2538bp|location=Sequence derived from alignment at ch1:3720477..3722126- (Aspergillus niger KJC3)
CTAGATATTGTTCTTCTTAGACACTTTGGTACGGCTCAAGGGTTGGTCCG
GCAAGGACCAATCATTCACAACCTAGCCCCAAATTCCACGGGTACTAGAC
TCCGGAGGGCACATCCCTGCGTCCAGGGGATCTCCATCTGGAGGCCTATT
AGAGGGGGCCTCGGGGCAGAGAACGGTCTCTTCAAAGTCTATCCCGGATC
CCAAGGGATCAGAACAGAAAATGAGCTGCGAGATAGTCAAATCAGCACAC
TTGAAATACGAATCCGTGCTGATCAGGTCTTTATTGCACATGGCGGGCTC
TGGATAGAGGAAGGTAACGGGAACGGCATCCTGATGTGGATGGGAGTGTC
GGCGGATATCATTGGTCTATACATTGACAAATACTGCCTACCTTTCGTTG
CAGGAGCGTACAATGCCTCGAGATTCCTTTCGCGAACAGTGCCACCCGGG
CTGGTCAAAGCAGAGACTCAGGCAACTCTAGCCGACTCCTTTTTCCCGCA
AGAGAGGCTAGTAAGGGCAGGCAACCATCGCTCGAACACTGCGGACGTGT
TCCTCCGTAGTGCGATACCTTACACCTCCCGGATTCTGGAGTATTTTACG
AACCTGGATCCGACCGGTATAATCCTGGCAGCTTGTCCCGCTGGTGAAGA
TCCGAGGATGGCATTTCTCACCGTGGACCGGGGTACTGACATAAGGAAAT
GGTTTCTTCGCGCTCTTGCTGTACGATGTCTCATTCGGCGCCATCATTCG
AGAGGTGGTACAATAGAGGATTTTATCCGGGCGGACGGACTACCCAAAAC
ATCACGGTTAATCAACACTATTAGGCACGGTAAAAAGCTGTATTGGATAG
AGTTATCATTGAGAAAGTCGGGTATCTGGATTGCCCTCCTGAATGTAATG
TCTCGGCTTGATCATATCACCTGGGAAGAGGTATTCTCCATACCGGACTC
GATACACCGGTACCCAACACTTTTGGAAATCCCGGAAGAATGGTCTCCAC
TTATGGAGGGTTGCACTCAGTTGTTGGGCTCACTCGCGCCTCCGGGCGCC
TCTGATGGATGCGTCACCCCCGGTCAGAGTTTTGATTAAATGGACCAACA
GGGGTATGAATATATTAATAGTGGGGGAATAAATGAAAAGGCTCTTATAC
ATTCTTTATCTGTTGAAGAGAATGCACTTGGGCACCCCGGCAGTTCAGAT
TCAGCGGAGCACTTGAGTTCTGCCGATCATCAACAGGAGTGGCAGCAAGC
TATGGAGCATGGCTTCAACCTAGATATTGTTCTTCTTAGACACTTTGGTA
CGGCTCAAGGGTTGGTCCGGCAAGGACCAATCATTCACAACCTAGCCCCA
AATTCCACGGGTACTAGACTCCGGAGGGCACATCCCTGCGTCCAGGGGAT
CTCCATCTGGAGGCCTATTAGAGGGGGCCTCGGGGCAGAGAACGGTCTCT
TCAAAGTCTATCCCGGATCCCAAGGGATCAGAACAGAAAATGAGCTGCGA
GATAGTCAAATCAGCACACTTGAAATACGAATCCGTGCTGATCAGGTCTT
TATTGCACATGGCGGGCTCTGGATAGAGGAAGGTAACGGGAACGGCATCC
TGATGTGGATGGGAGTGTCGGCGGATATCATTGGTCTATACATTGACAAA
TACTGCCTACCTTTCGTTGCAGGAGCGTACAATGCCTCGAGATTCCTTTC
GCGAACAGTGCCACCCGGGCTGGTCAAAGCAGAGACTCAGGCAACTCTAG
CCGACTCCTTTTTCCCGCAAGAGAGGCTAGTAAGGGCAGGCAACCATCGC
TCGAACACTGCGGACGTGTTCCTCCGTAGTGCGATACCTTACACCTCCCG
GATTCTGGAGTATTTTACGAACCTGGATCCGACCGGTATAATCCTGGCAG
CTTGTCCCGCTGGTGAAGATCCGAGGATGGCATTTCTCACCGTGGACCGG
GGTACTGACATAAGGAAATGGTTTCTTCGCGCTCTTGCTGTACGATGTCT
CATTCGGCGCCATCATTCGAGAGGTGGTACAATAGAGGATTTTATCCGGG
CGGACGGACTACCCAAAACATCACGGTTAATCAACACTATTAGGCACGGT
AAAAAGCTGTATTGGATAGAGTTATCATTGAGAAAGTCGGGTATCTGGAT
TGCCCTCCTGAATGTAATGTCTCGGCTTGATCATATCACCTGGGAAGAGG
TATTCTCCATACCGGACTCGATACACCGGTACCCAACACTTTTGGAAATC
CCGGAAGAATGGTCTCCACTTATGGAGGGTTGCACTCAGTTGTTGGGCTC
ACTCGCGCCTCCGGGCGCCTCTGATGGATGCGTCACCCCCGGTCAGAGTT
TTGATTAAATGGACCAACAGGGGTATGAATATATTAATAGTGGGGGAATA
AATGAAAAGGCTCTTATACATTCTTTATCTGTTGAAGAGAATGCACTTGG
GCACCCCGGCAGTTCAGATTCAGCGGAGCACTTGAGTTCTGCCGATCATC
AACAGGAGTGGCAGCAAGCTATGGAGCATGGCTTCAAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001430-T1.utr3p1 | KJC3_001430-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001430-T1.utr5p1 | KJC3_001430-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3720477..3722126 - |
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