You are here

Home

KJC3_001434-T1, KJC3_001434-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001434-T1
Unique NameKJC3_001434-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3731673..3732735-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001434-T1 ID=KJC3_001434-T1|Name=KJC3_001434-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1063bp|location=Sequence derived from alignment at ch1:3731673..3732735- (Aspergillus niger KJC3)
ATACTTTGATAGACCACTATATACAAAACACATCCGAAAGCTCACAAATA
TTTTCAAGACTTATAAGCTTGTTGACACTCTCCTGTACCATATCCACATT
AGTCATCATGGTTACATCGACACGAGAAAGGATTAACATAGACGATCTTC
TCGACCCCGCCCATGCCAACGATGGAGAGAAGTTCTGCGACAATCGAAGG
TCAGATGCTTGCAGTGAATGCTTTGCTACTTCTCACTGAGATAGAGTATA
GACCTTCGAGTCGCTTTTCTGGCAAGACCAAAAAAGATACAATCACACAC
AAGATTCAACCTGAGTCGAGAGGGGAGAGAATGCTGCCTCGCAAGATTTA
TGTTTGTCCCATGCTGGGATGCTCCAAAAACTTTTCAACTTATGCCAAGA
AAATGAATCATTTTCGCCGGAGGCATCTTCCCAGTGCGACCGAGGACCGT
CCTAAGGCACAGTTTTGCAATCCACCTAGCCTCGAAAGTCACCAAGCAGC
GACCAAAGGCTGCCAGAATGGCCACAGCTGGAATGGTGTTCGCGTGAGTT
ACCCAAGGCTACTGTCAGTAGTACTACCGTCCAATCCTATTGACAACTAT
TCGTGGTCTACAGAGGGACAGTGGTCAGCATATATTGGAGCCTCATGATC
CAAAGCGCCAACCGGAAAAAAACAAGGGATAAGGGCAGCATATCCCAAGA
GATTGAGGATATCTTGCCTTCTGGATCCCGCTTAGCTTTCAGCAGCGCTG
GAAGATGAAAGCAATAACCAGTGATTACTGTATTTAGCTTCACTGGAGGT
GGAATCAACGCCGCGGGCTCTTGGGGGCGAAGGAAGAAGAGCTGGACTCA
AATAACTGTGATATTACCGTTCACACAGTATGGATCTCACGCTCCAGCCA
TGCGGTCATTCAGCCACCACTATTAGTGCTATGCTTGCTCAAATGTTTTG
TCTGCTTTATGGCGCTTATCGGAACGTGCACTACAATAGAGTACTTTGGC
CTGCTCCAAGCGTTGCATGTGCTTAATGTGCCATGCGGGAAAGTTAGTGA
TCATACCTACAGC
back to top

Coding sequence (CDS) from alignment at ch1:3731673..3732735-

>KJC3_001434-T1 ID=KJC3_001434-T1|Name=KJC3_001434-T1|organism=Aspergillus niger KJC3|type=CDS|length=1359bp|location=Sequence derived from alignment at ch1:3731673..3732735- (Aspergillus niger KJC3)
AGGGACAGTGGTCAGCATATATTGGAGCCTCATGATCCAAAGCGCCAACC
GGAAAAAAACAAGGGATAAACCTTCGAGTCGCTTTTCTGGCAAGACCAAA
AAAGATACAATCACACACAAGATTCAACCTGAGTCGAGAGGGGAGAGAAT
GCTGCCTCGCAAGATTTATGTTTGTCCCATGCTGGGATGCTCCAAAAACT
TTTCAACTTATGCCAAGAAAATGAATCATTTTCGCCGGAGGCATCTTCCC
AGTGCGACCGAGGACCGTCCTAAGGCACAGTTTTGCAATCCACCTAGCCT
CGAAAGTCACCAAGCAGCGACCAAAGGCTGCCAGAATGGCCACAGCTGGA
ATGGTGTTCGCATGGTTACATCGACACGAGAAAGGATTAACATAGACGAT
CTTCTCGACCCCGCCCATGCCAACGATGGAGAGAAGTTCTGCGACAATCG
AAGAGGGACAGTGGTCAGCATATATTGGAGCCTCATGATCCAAAGCGCCA
ACCGGAAAAAAACAAGGGATAAACCTTCGAGTCGCTTTTCTGGCAAGACC
AAAAAAGATACAATCACACACAAGATTCAACCTGAGTCGAGAGGGGAGAG
AATGCTGCCTCGCAAGATTTATGTTTGTCCCATGCTGGGATGCTCCAAAA
ACTTTTCAACTTATGCCAAGAAAATGAATCATTTTCGCCGGAGGCATCTT
CCCAGTGCGACCGAGGACCGTCCTAAGGCACAGTTTTGCAATCCACCTAG
CCTCGAAAGTCACCAAGCAGCGACCAAAGGCTGCCAGAATGGCCACAGCT
GGAATGGTGTTCGCATGGTTACATCGACACGAGAAAGGATTAACATAGAC
GATCTTCTCGACCCCGCCCATGCCAACGATGGAGAGAAGTTCTGCGACAA
TCGAAGAGGGACAGTGGTCAGCATATATTGGAGCCTCATGATCCAAAGCG
CCAACCGGAAAAAAACAAGGGATAAACCTTCGAGTCGCTTTTCTGGCAAG
ACCAAAAAAGATACAATCACACACAAGATTCAACCTGAGTCGAGAGGGGA
GAGAATGCTGCCTCGCAAGATTTATGTTTGTCCCATGCTGGGATGCTCCA
AAAACTTTTCAACTTATGCCAAGAAAATGAATCATTTTCGCCGGAGGCAT
CTTCCCAGTGCGACCGAGGACCGTCCTAAGGCACAGTTTTGCAATCCACC
TAGCCTCGAAAGTCACCAAGCAGCGACCAAAGGCTGCCAGAATGGCCACA
GCTGGAATGGTGTTCGCATGGTTACATCGACACGAGAAAGGATTAACATA
GACGATCTTCTCGACCCCGCCCATGCCAACGATGGAGAGAAGTTCTGCGA
CAATCGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001434KJC3_001434Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001434-T1KJC3_001434-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001434-T1.cdsKJC3_001434-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001434-T1.utr3p1KJC3_001434-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001434-T1.exon3KJC3_001434-T1.exon3Aspergillus niger KJC3exon
KJC3_001434-T1.exon2KJC3_001434-T1.exon2Aspergillus niger KJC3exon
KJC3_001434-T1.exon1KJC3_001434-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001434-T1.utr5p1KJC3_001434-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3731673..3732735 -
Powered by Drupal