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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3738413..3740785+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001436-T1 ID=KJC3_001436-T1|Name=KJC3_001436-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2373bp|location=Sequence derived from alignment at ch1:3738413..3740785+ (Aspergillus niger KJC3)
CTGGACAGGATCAGGCAGAGCGCTAACCAGTCGTTGGGTTACGGAAGCAA
AATCACTCCCACGTACAGCCACCAAGCCACCAGGTTCTTTTCCACCCGCC
TTGGCAGGAATGCTTGACTTCTAGTCCCGTGACGCGGTTGCCGACCGGAG
CAGGTCTGCGCCTCTAGCTGCTATCGATGGTCACGTGGATAGGGAAGGGG
CTCAGTAATGGCCGTGCACAGGGGCATCATCGTAGCAGACAATAGTTGCG
CAGTTCTCTCTCTACGCTTCTGATGCATTGGGAATATTCTCTGGTCATTC
TCCTGGGGGCCTGCGCGGTCAGCGTGGACGGCTCTCCCCAGGTCGATCTG
GGCTATGCTCGCTACCGCGGGGTTCGACTGCCTGCCGGGGTGGATGAATA
TCTTGGGATGAGGTACGCAGCACCTCCCCTAGGCCAGCAAAGGTTCCGTG
CACCAGGGGATCCGAGCAGCACATCATCCATTCAGGATGCATTCGAGGTA
GGCGACCCTCCATCGCATTCCCATCAAGGCGCGTATTGACAGACTGGGCG
GCGGCGTAGTTTGGGCCAACCTGCATCGGCGTCGGAGAGGAGATAAGCCC
GCTTGTGGGGGAAGACTGTCTGTTCATCAACGTGTTCACCCCCTCCCACG
CAACCACCCTCTCCAGACTGCCGGTGTGGGTGCACATTCAGGGCGGCGGT
TATGCATCCAACGCCAACGCCAACTTCAACGGGACGAACGTCATTCAACA
TTCGGGCTACGACCTCGTGTTCGTCAACTTCAACTACCGTGTTGGGGCCC
TGGGATTCCTGGCCAGCGAGGAGATCCGGCGGGATGGAGACCTGAACGTG
GGATTGCTAGACCAGCGAAAGGCCCTCGCATGGGTCAAGCAGCATATCAG
CCAGGTAGGTCACGGTCCGAACTGCTATAGCGCAGGCGCTGACCTGCTCG
GTTGTAGTTTGGGGGCGACCCGGACCACGTTATCGCTCATGGTGATTCCG
CCGGCGCGGGTTCGGTGACGCATCATATGACCGCGTATGGCGGCCGAGCG
GAGGGACTCTTTGCCGGTGCGGTGCTGGAGTCTCCGTTCTGGCCCACACT
GCGCACGGTTGCCGAGATGGAATTTCAGTACACACGGTTTGTACAGCGCG
TCGGCTGCTCGGATGCGTCGTCTGTCTTGGCGTGTCTTCAGTCTGCGGAC
CTGGCAGCGATACAGAAGGGCAACGTGGTGGACACATTTCCAGACGCCGC
CGTGGATCCGCCCCCGCTGTGGTATTTTCTGCCCGTCATTGACGGTGCGG
TGGTGCAAGACCAGTTGTCTCGGCTCTTCGATCAGGGCAAGACCGTGAAA
ATTCCCGTGCTCGTTGGTGACGACACCAACGAGGGGTCGACCTTTGCTTA
TAACGCCAGCGACGCGTCTGACATGTCGCGGTTTCTCAACGCCAACTACC
CAGGGCTGTCATCTGCCAGCCTGGCCGCCATCGGTGATGCATATCCTCGC
ATGCAACCCGTGGCGGATCATGCAGCCTATTTCCCGTCCGCATCTGCCGC
CTATGGTGACGCTGCCTTTACGTGCCCGGGCAATCGCATCGCAGCGTCCA
TGGCAGATCACCTCCCGTCCGGCAGGGTTTGGAACTACCGATACAACGTG
CGAGCCCCCGAGCTGGTCGATGAAGGCCTGGGTGTGCCGCATATCTTCGA
GCTGAGCGCCATTTTCGGAGTCGGCTTCGCCGGTAATAGCGAGATCACGA
GCTACAACGGGATCAACGCGAATGCGGTCGCCACCGTGATGGACTATTGG
ATCAGTTTCGTGAAGGCACTGGATCCAAACCCTCGCAGGCGTAGCCAAGC
ACCGCGCTGGGAAGCGTGGAAGCCCGGCCTGGGACAACGGCTCAAGATAC
AGACAAACACTACCGCGATGGAGCCAATCCCGCCGCAGCAAGCGGATCGA
TGTTCACTGTGGAGCGTACTGGCGCCGGAAATGGAGATTTAGTCGATGGC
TACGAGCGGGTTCCCCGGCATGATCCCTCTCGTTCCCGGTATGTTGTATG
TCACGGGGCGGTCCAGCTCCAGCCCGCCCTTCAAGCTCGCACTTCCGCTC
CCTCTACTCTGGCTTAGAATGATATGGACATGTTTGGAGTTTTGTATCGT
TCCACGGCAACATACACTGGTGTTAAGAGGCAGCCCTGACTAGGCTCCGA
ACTAGGAAATATTACAGACGGTTACAGTAGTAAGACCCGGACCCGTGTCA
GGGTTGCCTTGACTATGATAGCCACATTGCAGGAGCTTGACTCGTCTATT
GTTAAAGCGAATCCACAGAGTCAAGAGCACCGTATAATAGATAATTGAGC
AAGACCCGGCACGTGTACACGGT back to topCoding sequence (CDS) from alignment at ch1:3738413..3740785+ >KJC3_001436-T1 ID=KJC3_001436-T1|Name=KJC3_001436-T1|organism=Aspergillus niger KJC3|type=CDS|length=4815bp|location=Sequence derived from alignment at ch1:3738413..3740785+ (Aspergillus niger KJC3)
ATGCATTGGGAATATTCTCTGGTCATTCTCCTGGGGGCCTGCGCGGTCAG
CGTGGACGGCTCTCCCCAGGTCGATCTGGGCTATGCTCGCTACCGCGGGG
TTCGACTGCCTGCCGGGGTGGATGAATATCTTGGGATGAGGTACGCAGCA
CCTCCCCTAGGCCAGCAAAGGTTCCGTGCACCAGGGGATCCGAGCAGCAC
ATCATCCATTCAGGATGCATTCGAGTTTGGGCCAACCTGCATCGGCGTCG
GAGAGGAGATAAGCCCGCTTGTGGGGGAAGACTGTCTGTTCATCAACGTG
TTCACCCCCTCCCACGCAACCACCCTCTCCAGACTGCCGGTGTGGGTGCA
CATTCAGGGCGGCGGTTATGCATCCAACGCCAACGCCAACTTCAACGGGA
CGAACGTCATTCAACATTCGGGCTACGACCTCGTGTTCGTCAACTTCAAC
TACCGTGTTGGGGCCCTGGGATTCCTGGCCAGCGAGGAGATCCGGCGGGA
TGGAGACCTGAACGTGGGATTGCTAGACCAGCGAAAGGCCCTCGCATGGG
TCAAGCAGCATATCAGCCAGTTTGGGGGCGACCCGGACCACGTTATCGCT
CATGGTGATTCCGCCGGCGCGGGTTCGGTGACGCATCATATGACCGCGTA
TGGCGGCCGAGCGGAGGGACTCTTTGCCGGTGCGGTGCTGGAGTCTCCGT
TCTGGCCCACACTGCGCACGGTTGCCGAGATGGAATTTCAGTACACACGG
TTTGTACAGCGCGTCGGCTGCTCGGATGCGTCGTCTGTCTTGGCGTGTCT
TCAGTCTGCGGACCTGGCAGCGATACAGAAGGGCAACGTGGTGGACACAT
TTCCAGACGCCGCCGTGGATCCGCCCCCGCTGTGGTATTTTCTGCCCGTC
ATTGACGGTGCGGTGGTGCAAGACCAGTTGTCTCGGCTCTTCGATCAGGG
CAAGACCGTGAAAATTCCCGTGCTCGTTGGTGACGACACCAACGAGGGGT
CGACCTTTGCTTATAACGCCAGCGACGCGTCTGACATGTCGCGGTTTCTC
AACGCCAACTACCCAGGGCTGTCATCTGCCAGCCTGGCCGCCATCGGTGA
TGCATATCCTCGCATGCAACCCGTGGCGGATCATGCAGCCTATTTCCCGT
CCGCATCTGCCGCCTATGGTGACGCTGCCTTTACGTGCCCGGGCAATCGC
ATCGCAGCGTCCATGGCAGATCACCTCCCGTCCGGCAGGGTTTGGAACTA
CCGATACAACGTGCGAGCCCCCGAGCTGGTCGATGAAGGCCTGGGTGTGC
CGCATATCTTCGAGCTGAGCGCCATTTTCGGAGTCGGCTTCGCCGGTAAT
AGCGAGATCACGAGCTACAACGGGATCAACGCGAATGCGGTCGCCACCGT
GATGGACTATTGGATCAGTTTCGTGAAGGCACTGGATCCAAACCCTCGCA
GGCGTAGCCAAGCACCGCGCTGGGAAGCGTGGAAGCCCGGCCTGGGACAA
CGGCTCAAGATACAGACAAACACTACCGCGATGGAGCCAATCCCGCCGCA
GCAAGCGGATCGATGTTCACTGTGGAGCGTACTGGCGCCGGAAATGGAGA
TTTAGATGCATTGGGAATATTCTCTGGTCATTCTCCTGGGGGCCTGCGCG
GTCAGCGTGGACGGCTCTCCCCAGGTCGATCTGGGCTATGCTCGCTACCG
CGGGGTTCGACTGCCTGCCGGGGTGGATGAATATCTTGGGATGAGGTACG
CAGCACCTCCCCTAGGCCAGCAAAGGTTCCGTGCACCAGGGGATCCGAGC
AGCACATCATCCATTCAGGATGCATTCGAGTTTGGGCCAACCTGCATCGG
CGTCGGAGAGGAGATAAGCCCGCTTGTGGGGGAAGACTGTCTGTTCATCA
ACGTGTTCACCCCCTCCCACGCAACCACCCTCTCCAGACTGCCGGTGTGG
GTGCACATTCAGGGCGGCGGTTATGCATCCAACGCCAACGCCAACTTCAA
CGGGACGAACGTCATTCAACATTCGGGCTACGACCTCGTGTTCGTCAACT
TCAACTACCGTGTTGGGGCCCTGGGATTCCTGGCCAGCGAGGAGATCCGG
CGGGATGGAGACCTGAACGTGGGATTGCTAGACCAGCGAAAGGCCCTCGC
ATGGGTCAAGCAGCATATCAGCCAGTTTGGGGGCGACCCGGACCACGTTA
TCGCTCATGGTGATTCCGCCGGCGCGGGTTCGGTGACGCATCATATGACC
GCGTATGGCGGCCGAGCGGAGGGACTCTTTGCCGGTGCGGTGCTGGAGTC
TCCGTTCTGGCCCACACTGCGCACGGTTGCCGAGATGGAATTTCAGTACA
CACGGTTTGTACAGCGCGTCGGCTGCTCGGATGCGTCGTCTGTCTTGGCG
TGTCTTCAGTCTGCGGACCTGGCAGCGATACAGAAGGGCAACGTGGTGGA
CACATTTCCAGACGCCGCCGTGGATCCGCCCCCGCTGTGGTATTTTCTGC
CCGTCATTGACGGTGCGGTGGTGCAAGACCAGTTGTCTCGGCTCTTCGAT
CAGGGCAAGACCGTGAAAATTCCCGTGCTCGTTGGTGACGACACCAACGA
GGGGTCGACCTTTGCTTATAACGCCAGCGACGCGTCTGACATGTCGCGGT
TTCTCAACGCCAACTACCCAGGGCTGTCATCTGCCAGCCTGGCCGCCATC
GGTGATGCATATCCTCGCATGCAACCCGTGGCGGATCATGCAGCCTATTT
CCCGTCCGCATCTGCCGCCTATGGTGACGCTGCCTTTACGTGCCCGGGCA
ATCGCATCGCAGCGTCCATGGCAGATCACCTCCCGTCCGGCAGGGTTTGG
AACTACCGATACAACGTGCGAGCCCCCGAGCTGGTCGATGAAGGCCTGGG
TGTGCCGCATATCTTCGAGCTGAGCGCCATTTTCGGAGTCGGCTTCGCCG
GTAATAGCGAGATCACGAGCTACAACGGGATCAACGCGAATGCGGTCGCC
ACCGTGATGGACTATTGGATCAGTTTCGTGAAGGCACTGGATCCAAACCC
TCGCAGGCGTAGCCAAGCACCGCGCTGGGAAGCGTGGAAGCCCGGCCTGG
GACAACGGCTCAAGATACAGACAAACACTACCGCGATGGAGCCAATCCCG
CCGCAGCAAGCGGATCGATGTTCACTGTGGAGCGTACTGGCGCCGGAAAT
GGAGATTTAGATGCATTGGGAATATTCTCTGGTCATTCTCCTGGGGGCCT
GCGCGGTCAGCGTGGACGGCTCTCCCCAGGTCGATCTGGGCTATGCTCGC
TACCGCGGGGTTCGACTGCCTGCCGGGGTGGATGAATATCTTGGGATGAG
GTACGCAGCACCTCCCCTAGGCCAGCAAAGGTTCCGTGCACCAGGGGATC
CGAGCAGCACATCATCCATTCAGGATGCATTCGAGTTTGGGCCAACCTGC
ATCGGCGTCGGAGAGGAGATAAGCCCGCTTGTGGGGGAAGACTGTCTGTT
CATCAACGTGTTCACCCCCTCCCACGCAACCACCCTCTCCAGACTGCCGG
TGTGGGTGCACATTCAGGGCGGCGGTTATGCATCCAACGCCAACGCCAAC
TTCAACGGGACGAACGTCATTCAACATTCGGGCTACGACCTCGTGTTCGT
CAACTTCAACTACCGTGTTGGGGCCCTGGGATTCCTGGCCAGCGAGGAGA
TCCGGCGGGATGGAGACCTGAACGTGGGATTGCTAGACCAGCGAAAGGCC
CTCGCATGGGTCAAGCAGCATATCAGCCAGTTTGGGGGCGACCCGGACCA
CGTTATCGCTCATGGTGATTCCGCCGGCGCGGGTTCGGTGACGCATCATA
TGACCGCGTATGGCGGCCGAGCGGAGGGACTCTTTGCCGGTGCGGTGCTG
GAGTCTCCGTTCTGGCCCACACTGCGCACGGTTGCCGAGATGGAATTTCA
GTACACACGGTTTGTACAGCGCGTCGGCTGCTCGGATGCGTCGTCTGTCT
TGGCGTGTCTTCAGTCTGCGGACCTGGCAGCGATACAGAAGGGCAACGTG
GTGGACACATTTCCAGACGCCGCCGTGGATCCGCCCCCGCTGTGGTATTT
TCTGCCCGTCATTGACGGTGCGGTGGTGCAAGACCAGTTGTCTCGGCTCT
TCGATCAGGGCAAGACCGTGAAAATTCCCGTGCTCGTTGGTGACGACACC
AACGAGGGGTCGACCTTTGCTTATAACGCCAGCGACGCGTCTGACATGTC
GCGGTTTCTCAACGCCAACTACCCAGGGCTGTCATCTGCCAGCCTGGCCG
CCATCGGTGATGCATATCCTCGCATGCAACCCGTGGCGGATCATGCAGCC
TATTTCCCGTCCGCATCTGCCGCCTATGGTGACGCTGCCTTTACGTGCCC
GGGCAATCGCATCGCAGCGTCCATGGCAGATCACCTCCCGTCCGGCAGGG
TTTGGAACTACCGATACAACGTGCGAGCCCCCGAGCTGGTCGATGAAGGC
CTGGGTGTGCCGCATATCTTCGAGCTGAGCGCCATTTTCGGAGTCGGCTT
CGCCGGTAATAGCGAGATCACGAGCTACAACGGGATCAACGCGAATGCGG
TCGCCACCGTGATGGACTATTGGATCAGTTTCGTGAAGGCACTGGATCCA
AACCCTCGCAGGCGTAGCCAAGCACCGCGCTGGGAAGCGTGGAAGCCCGG
CCTGGGACAACGGCTCAAGATACAGACAAACACTACCGCGATGGAGCCAA
TCCCGCCGCAGCAAGCGGATCGATGTTCACTGTGGAGCGTACTGGCGCCG
GAAATGGAGATTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001436-T1.utr5p1 | KJC3_001436-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001436-T1.utr3p1 | KJC3_001436-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | MEROPS:MER0033188 |
| DBxref | InterPro:IPR019819 |
| DBxref | InterPro:IPR002018 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3738413..3740785 + |
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