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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3744306..3744995+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001438-T1 ID=KJC3_001438-T1|Name=KJC3_001438-T1|organism=Aspergillus niger KJC3|type=mRNA|length=690bp|location=Sequence derived from alignment at ch1:3744306..3744995+ (Aspergillus niger KJC3)
ATGCACCTGAAGAGCACGGGCAGCCGCTACCCCACAAGATCGAATGTGGC
AACAGGGCCTTCGATCACTGCTGCTACCACTCCCCCAGGAGTGTCGTGCC
TGTTGAGCGACTCCGCCAAAGCTCCCCCGCCTAGTGCAGTGGACAGCATG
GATTCGAACCCCCTCGATCCTGAAGCTGCCCCAACTGACAAAAACAACAA
TGAGACGGACTCCGCAGGAGATCCATCCATCAGGCGAGCCAGCGGACGGG
CAAAGCTGAATAGCTTGGCTCGGGCATTTCCGAAACCTCCCGGACAGGGG
CCACCAACAGCTTGGGCCCTGGATGAGGACGCCACTGTCATTGCCAAGCA
CGATTATGGAGAGAGGTGGGAACAGATTAGTCAGTATTTACCTGGCCGTA
CTCCCGAGGCATGCGAATGCCGGTACGCCTTCCTCCGACACCGGCCTGAG
TGGAACGAGAGCTGGAAGAACAGCATAGCGTACTGGTACCAGCAGTCCGT
GAGCCGTCATTCCCAGATACGGTTGACTTGGCGAGCTGATTCTCGTGCCT
TGTACAGATACAAGTCGGAGCTTTGGGCTCACGTAAGCGAGAAAACACGT
CTTCCCGAGCGCGATATCGAAGCCCTGGTGTGGCACCTTGGACCATGGGA
GATCGCGCGCCGCGCAGCAGTTGCACAACACATAGCTTGA back to topCoding sequence (CDS) from alignment at ch1:3744306..3744995+ >KJC3_001438-T1 ID=KJC3_001438-T1|Name=KJC3_001438-T1|organism=Aspergillus niger KJC3|type=CDS|length=1254bp|location=Sequence derived from alignment at ch1:3744306..3744995+ (Aspergillus niger KJC3)
ATGCACCTGAAGAGCACGGGCAGCCGCTACCCCACAAGATCGAATGTGGC
AACAGGGCCTTCGATCACTGCTGCTACCACTCCCCCAGGAGTGTCGTGCC
TGTTGAGCGACTCCGCCAAAGCTCCCCCGCCTAGTGCAGTGGACAGCATG
GATTCGAACCCCCTCGATCCTGAAGCTGCCCCAACTGACAAAAACAACAA
TGAGACGGACTCCGCAGGAGATCCATCCATCAGGCGAGCCAGCGGACGGG
CAAAGCTGAATAGCTTGGCTCGGGCATTTCCGAAACCTCCCGGACAGGGG
CCACCAACAGCTTGGGCCCTGGATGAGGACGCCACTGTCATTGCCAAGCA
CGATTATGGAGAGAGGTGGGAACAGATTAGTCAGTATTTACCTGGCCGTA
CTCCCGAGGCATGCGAATGCCGGTACGCCTTCCTCCGACACCGGCCTGAG
TGGAACGAGAGCTGGAAGAACAGCATAGCGTACTGGTACCAGCAATACAA
GTCGGAGCTTTGGGCTCACGTAAGCGAGAAAACACGTCTTCCCGAGCGCG
ATATCGAAGCCCTGGTGTGGCACCTTGGACCATGGGAGATCGCGCGCCGC
GCAGCAGTTGCACAACACATAGCTTGAATGCACCTGAAGAGCACGGGCAG
CCGCTACCCCACAAGATCGAATGTGGCAACAGGGCCTTCGATCACTGCTG
CTACCACTCCCCCAGGAGTGTCGTGCCTGTTGAGCGACTCCGCCAAAGCT
CCCCCGCCTAGTGCAGTGGACAGCATGGATTCGAACCCCCTCGATCCTGA
AGCTGCCCCAACTGACAAAAACAACAATGAGACGGACTCCGCAGGAGATC
CATCCATCAGGCGAGCCAGCGGACGGGCAAAGCTGAATAGCTTGGCTCGG
GCATTTCCGAAACCTCCCGGACAGGGGCCACCAACAGCTTGGGCCCTGGA
TGAGGACGCCACTGTCATTGCCAAGCACGATTATGGAGAGAGGTGGGAAC
AGATTAGTCAGTATTTACCTGGCCGTACTCCCGAGGCATGCGAATGCCGG
TACGCCTTCCTCCGACACCGGCCTGAGTGGAACGAGAGCTGGAAGAACAG
CATAGCGTACTGGTACCAGCAATACAAGTCGGAGCTTTGGGCTCACGTAA
GCGAGAAAACACGTCTTCCCGAGCGCGATATCGAAGCCCTGGTGTGGCAC
CTTGGACCATGGGAGATCGCGCGCCGCGCAGCAGTTGCACAACACATAGC
TTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR017877 |
| DBxref | InterPro:IPR001005 |
| DBxref | PFAM:PF00249 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3744306..3744995 + |
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