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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3768407..3769108+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001445-T1 ID=KJC3_001445-T1|Name=KJC3_001445-T1|organism=Aspergillus niger KJC3|type=mRNA|length=702bp|location=Sequence derived from alignment at ch1:3768407..3769108+ (Aspergillus niger KJC3)
ATGGATAATGCAGCTTCTGAAGCTTCTACTGCCGTTGAGGGTATCGCAAC
CAAGGCTTCTACTGCCGCCGGAACGGTTGTGAGTCAAGCGAGCGATGCGC
TTCGGACCTTGGAAAAAGAACTCCAGTCAGAGCTCCCGGCGTATTACACC
GTCGGCTTGTGGGGCTACTGCGAAGGCAACGATACTCAAGTCGTCTCCTG
TTCCCGGCCAAGCATATCTTTCACGTTCAATATCTCCGGCATTCTGAATT
CTGCTTCGACAGAGATTGATGAACTGGTTTCAAGAATCGACGATAAAGTC
CTCACTGGATATTACGACGTATCAAGGGCGGTTATTTGGTTATATATCTC
TGGCTTCGTCGCAGCGACACTTACAGCACTTCTGGGTATTAGGAAGACGT
TTTTTAATGGAGGAAATAAGCTGCTCCTCACTTTCTGCGTGGTATTTCTA
TCATCATTAGGGTCGGAAATACGAGAAAGGACTTGCTAACTGTTCCAGCT
TTCCTTGGCCCTTATCATGTCCGCAACGATCGGCGTAAACGTCATATACC
GTCTGAACACATCCGGGATCAATACAGTTCTGGGCAGCTTTGGCGCTTCA
GCCAGTCTTGGAACGCACATGCTAGCCGCTGCTTGGCTTGCATTCGCATT
TTCCAGTAGTGCCTTGTTGCTCTGGCTGATCCAGTCATATTGTTGTAGCT
GA back to topCoding sequence (CDS) from alignment at ch1:3768407..3769108+ >KJC3_001445-T1 ID=KJC3_001445-T1|Name=KJC3_001445-T1|organism=Aspergillus niger KJC3|type=CDS|length=1290bp|location=Sequence derived from alignment at ch1:3768407..3769108+ (Aspergillus niger KJC3)
ATGGATAATGCAGCTTCTGAAGCTTCTACTGCCGTTGAGGGTATCGCAAC
CAAGGCTTCTACTGCCGCCGGAACGGTTGTGAGTCAAGCGAGCGATGCGC
TTCGGACCTTGGAAAAAGAACTCCAGTCAGAGCTCCCGGCGTATTACACC
GTCGGCTTGTGGGGCTACTGCGAAGGCAACGATACTCAAGTCGTCTCCTG
TTCCCGGCCAAGCATATCTTTCACGTTCAATATCTCCGGCATTCTGAATT
CTGCTTCGACAGAGATTGATGAACTGGTTTCAAGAATCGACGATAAAGTC
CTCACTGGATATTACGACGTATCAAGGGCGGTTATTTGGTTATATATCTC
TGGCTTCGTCGCAGCGACACTTACAGCACTTCTGGGTATTAGGAAGACGT
TTTTTAATGGAGGAAATAAGCTGCTCCTCACTTTCTGCGTGCTTTCCTTG
GCCCTTATCATGTCCGCAACGATCGGCGTAAACGTCATATACCGTCTGAA
CACATCCGGGATCAATACAGTTCTGGGCAGCTTTGGCGCTTCAGCCAGTC
TTGGAACGCACATGCTAGCCGCTGCTTGGCTTGCATTCGCATTTTCCAGT
AGTGCCTTGTTGCTCTGGCTGATCCAGTCATATTGTTGTAGCTGAATGGA
TAATGCAGCTTCTGAAGCTTCTACTGCCGTTGAGGGTATCGCAACCAAGG
CTTCTACTGCCGCCGGAACGGTTGTGAGTCAAGCGAGCGATGCGCTTCGG
ACCTTGGAAAAAGAACTCCAGTCAGAGCTCCCGGCGTATTACACCGTCGG
CTTGTGGGGCTACTGCGAAGGCAACGATACTCAAGTCGTCTCCTGTTCCC
GGCCAAGCATATCTTTCACGTTCAATATCTCCGGCATTCTGAATTCTGCT
TCGACAGAGATTGATGAACTGGTTTCAAGAATCGACGATAAAGTCCTCAC
TGGATATTACGACGTATCAAGGGCGGTTATTTGGTTATATATCTCTGGCT
TCGTCGCAGCGACACTTACAGCACTTCTGGGTATTAGGAAGACGTTTTTT
AATGGAGGAAATAAGCTGCTCCTCACTTTCTGCGTGCTTTCCTTGGCCCT
TATCATGTCCGCAACGATCGGCGTAAACGTCATATACCGTCTGAACACAT
CCGGGATCAATACAGTTCTGGGCAGCTTTGGCGCTTCAGCCAGTCTTGGA
ACGCACATGCTAGCCGCTGCTTGGCTTGCATTCGCATTTTCCAGTAGTGC
CTTGTTGCTCTGGCTGATCCAGTCATATTGTTGTAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005886 | plasma membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009571 |
| DBxref | PFAM:PF06687 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3768407..3769108 + |
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