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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3794823..3797794+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001448-T2 ID=KJC3_001448-T2|Name=KJC3_001448-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2972bp|location=Sequence derived from alignment at ch1:3794823..3797794+ (Aspergillus niger KJC3)
AAACGACGCCGAAAATGGCATCCTTCGCGGCCACATCTGGCTGCCCTCCA
TTTTCGACTGACCATAGCAGGCACCATACAAATCGCCACCTTTTCCCACC
TACCCCTTTGTTTCCTCTTTTACCCTCCAGCCCTTCTACACCTCCCCTCT
CCCATCTAAAAAGGCTCCATCCAGCCCGCAAGTCGACCATTTCTTGACTT
CAGTTCCGCCATAATATTTATATTTGGCCGAGTCGATGGCTCCTCCTCTC
GTTCCTCCTGCTCAACCGGGTGAGTACCAGTATTGGACTGACCCTATTCT
CTGCGAGGAGACTCGAGCAAGACTGGAACATTTCCGCAGCCTTGGATGGC
TTCCCCCAAACTTCAAGCCCAATACACTAGAAGGTCTCGCTGTTGTTGAA
TGATATTGGCGGAAGTTAGTATGCCATTGACTCAGAATCTTTCTTAAATT
AACATACAATAGGTATTGCATTCAGTCAAACGAGGACTACGTCGAGTACC
TACTCCTGGAGGATCAAGCTATCTACATGAACTTCTTTGATTGGATGTAC
TAGACCTCGCGGAAGAAACTCCTTCAATCGTATGACGAATACTGGCGACG
CCTTTGTCAGTACTTCGGCCTGTTCGCCCGGCGCCGTATGAATGACGATG
TTCACGAACAGATGCGACGGGTATGCTAGGTTTCCTTATGACTTCGCAGA
TAGAGAGCTAATTAGAATAACAGTTCATCGAACATGTACTTCCTGCTAAG
CGTAAAGTTCCCAGACGAACAGAGATTAAAAATACACTGGACGTGGCTGT
TTTCAGTGTCCTCTACCGCCATCACTGGGTATATTCAAAGCATTTCCGTC
ACGGGAGTATGATTATTCAATTTGCCACGATCCAGCTCTGGTCCGCCATT
ACCGGGACTCGACCAGGCGTGCTTCTTCCGCAGAACGTATCTCTAGCAGA
CAAGACGCTGAGCAAACGTAAACGGGACCAAACTTTTAAGAGCGACCTCC
CTAAATATGTCTCAGTGGACAATCTTCCGGCCTCAGTCTGCTACCGCGAT
ATCGAGCTCTTCTATCTTAAGGACCCAGATAGCAAGCGCGATGTACTTTG
TGCCATCATCGAATTCCGTAATCTCAAAGGTCGGCCAGAGGGCGCTGATG
GGTAAGGTCATCTTTAGTCAGCATTGCAATACTTCTAATCCTGATATTTT
CCACAGTACCAAATTCTTCAGGCACGGTGATTACCAACTAGCATCCTGCC
CAATCAATCAGATCATCTCATTAGCTTTTCGTGATGACGCTTTTCTCAAT
ACCACCTTAACGCCAGAGCTTATTTGGCGACTCCGAGTTCCGAAGCGCTC
GCCATCTCTTCCTCCCCGTTGGAAGCCGGAGAAACTAGACACTCCTCCTC
TTCGCCGTCTTCACCACACTCCATATGGACTCTCAATGACGTATGACTCA
AGTCCACAAGCGCTCCAAGAACTGGGCCGGGATGCAGGGTTTGAGGATAA
TGTGGGTCATTATAACTACCGTCGGTGGACGGCAAATGAAGTCAATCGTA
AGATCCCCTCCCCAACAAGAAAATATCATTAGCGCCAACTACATCTGCAT
CGTAAGAGTAGACCTCTTCTTATCCATATCTAACTGCTGTTCACAGGGAA
CTTTACCAGTCAGGAGCGGCAAAGGGTACTTGGCCAGTCTGGTGATGCGG
TTTTGAAAAACACTACCAATCACAGTTTAGCAACCGGGATCTCCAGCATG
TCGTTCTTCTCTGACCGTCTCAGGAAGAGGGACCCCCTAGCTCCGTCCGA
TCTCACTGATGCGCAAAAAGTCACTATTTGCCAGCATCCTAAAGTTATTG
AGCTTAGAAGAGAGAAGAGAAAGCTGATGGAGCAGATGCGATCTCTGGCC
GGCACAATAGGGAAAGCCAAGGAGTCATTCCCTCAGCTTTATCGAAGCCA
TGAAGAAGTTAAGAAGGAGCTTTCTCGGCTAAGGAAAAGTCTAGCAAACG
ACACGCAAGAGACAGTAAGGCTCGATCGTGACGTACGCAGGGTCAATTGG
AATGTGGTGCTGAAACATCTCGGGCAGATTGAACTTTGTTAACCTTGCGT
TCGTCAATGCTGCCAATCAAATGTGATACATCTTCACCAGTAGTCTCTGC
AATCGGGAAGATCACTGAGGTCAATACCCAGGCTCGGGGCAATACGCCGC
AGAATGCTGTTGCACTGCCGGAATGCGCGTCCGGGAGCCGCATGTCTGTA
TGCCATGTGGTGGAGCCAGCGCATGGCCTTCTTAATCTCCCTGACCGTGC
TCCCCAGATCGGAGAAGACGGGATGAGCGGGGTGTTCGCTGGGCCCAGAT
GGCCAGCTGGAAAGATGACAAAGAATAGCGGTTGTCGCTTGCATAATGTA
ATGGAGGATGCACCACCAAGGAGTCATTGCAGTGATCCACATGATGTCTG
GTGTCTGAGGAAGACATGCAAGGAGGGAGCGGGCGGAACGAATACACATG
AGGGCCATACTGGAGCGGAACTGCGTGCAACTACTGGAGTTTGGGCGTGA
ATTCGGGCACGAATGCTGGGCAACTTCTGGATCAGCAGACCGAATACTCA
ATGGCGAACCGGTGTGCGTGAGGCACGGGCGGCAAAGCATGATACGAGTG
CTGTAGTAGTTCATGGCTAAGGAAATGCGTTCTCGCTTCCATTGGCTGTT
GTTGCCACCCGGAATGTCTACCCCATCGCTGTTCACCGTGGTGAATCGGT
AGGCCTCGGGAACCTTACTGAGCCACATGTCTAGAATACTGCTATATTTT
CGGATTCCCTGCTCAATCTGGCTCCCAGAGTCGTGGACACCTTGAATACT
ATAAATGTTGATGATGATATCCTGCCCGATGGCAGCTAGGTCCACAAGAC
AGTGAAAGAACAGTGACGGGCTGGGTTCACAGGATGCGAGCCAGGACACA
CTGGCACGCGCTTCCTCCTCCG back to topCoding sequence (CDS) from alignment at ch1:3794823..3797794+ >KJC3_001448-T2 ID=KJC3_001448-T2|Name=KJC3_001448-T2|organism=Aspergillus niger KJC3|type=CDS|length=5925bp|location=Sequence derived from alignment at ch1:3794823..3797794+ (Aspergillus niger KJC3)
ATGAATGACGATGTTCACGAACAGATGCGACGGTTCATCGAACATGTACT
TCCTGCTAAGCGTAAAGTTCCCAGACGAACAGAGATTAAAAATACACTGG
ACGTGGCTGTTTTCAGTGTCCTCTACCGCCATCACTGGGTATATTCAAAG
CATTTCCGTCACGGGAGTATGATTATTCAATTTGCCACGATCCAGCTCTG
GTCCGCCATTACCGGGACTCGACCAGGCGTGCTTCTTCCGCAGAACGTAT
CTCTAGCAGACAAGACGCTGAGCAAACGTAAACGGGACCAAACTTTTAAG
AGCGACCTCCCTAAATATGTCTCAGTGGACAATCTTCCGGCCTCAGTCTG
CTACCGCGATATCGAGCTCTTCTATCTTAAGGACCCAGATAGCAAGCGCG
ATGTACTTTGTGCCATCATCGAATTCCGTAATCTCAAAGGTCGGCCAGAG
GGCGCTGATGGTACCAAATTCTTCAGGCACGGTGATTACCAACTAGCATC
CTGCCCAATCAATCAGATCATCTCATTAGCTTTTCGTGATGACGCTTTTC
TCAATACCACCTTAACGCCAGAGCTTATTTGGCGACTCCGAGTTCCGAAG
CGCTCGCCATCTCTTCCTCCCCGTTGGAAGCCGGAGAAACTAGACACTCC
TCCTCTTCGCCGTCTTCACCACACTCCATATGGACTCTCAATGACGTATG
ACTCAAGTCCACAAGCGCTCCAAGAACTGGGCCGGGATGCAGGGTTTGAG
GATAATGTGGGTCATTATAACTACCGTCGGTGGACGGCAAATGAAGTCAA
TCGGAACTTTACCAGTCAGGAGCGGCAAAGGGTACTTGGCCAGTCTGGTG
ATGCGGTTTTGAAAAACACTACCAATCACAGTTTAGCAACCGGGATCTCC
AGCATGTCGTTCTTCTCTGACCGTCTCAGGAAGAGGGACCCCCTAGCTCC
GTCCGATCTCACTGATGCGCAAAAAGTCACTATTTGCCAGCATCCTAAAG
TTATTGAGCTTAGAAGAGAGAAGAGAAAGCTGATGGAGCAGATGCGATCT
CTGGCCGGCACAATAGGGAAAGCCAAGGAGTCATTCCCTCAGCTTTATCG
AAGCCATGAAGAAGTTAAGAAGGAGCTTTCTCGGCTAAGGAAAAGTCTAG
CAAACGACACGCAAGAGACAATTGAACTTTGTTAAATGAATGACGATGTT
CACGAACAGATGCGACGGTTCATCGAACATGTACTTCCTGCTAAGCGTAA
AGTTCCCAGACGAACAGAGATTAAAAATACACTGGACGTGGCTGTTTTCA
GTGTCCTCTACCGCCATCACTGGGTATATTCAAAGCATTTCCGTCACGGG
AGTATGATTATTCAATTTGCCACGATCCAGCTCTGGTCCGCCATTACCGG
GACTCGACCAGGCGTGCTTCTTCCGCAGAACGTATCTCTAGCAGACAAGA
CGCTGAGCAAACGTAAACGGGACCAAACTTTTAAGAGCGACCTCCCTAAA
TATGTCTCAGTGGACAATCTTCCGGCCTCAGTCTGCTACCGCGATATCGA
GCTCTTCTATCTTAAGGACCCAGATAGCAAGCGCGATGTACTTTGTGCCA
TCATCGAATTCCGTAATCTCAAAGGTCGGCCAGAGGGCGCTGATGGTACC
AAATTCTTCAGGCACGGTGATTACCAACTAGCATCCTGCCCAATCAATCA
GATCATCTCATTAGCTTTTCGTGATGACGCTTTTCTCAATACCACCTTAA
CGCCAGAGCTTATTTGGCGACTCCGAGTTCCGAAGCGCTCGCCATCTCTT
CCTCCCCGTTGGAAGCCGGAGAAACTAGACACTCCTCCTCTTCGCCGTCT
TCACCACACTCCATATGGACTCTCAATGACGTATGACTCAAGTCCACAAG
CGCTCCAAGAACTGGGCCGGGATGCAGGGTTTGAGGATAATGTGGGTCAT
TATAACTACCGTCGGTGGACGGCAAATGAAGTCAATCGGAACTTTACCAG
TCAGGAGCGGCAAAGGGTACTTGGCCAGTCTGGTGATGCGGTTTTGAAAA
ACACTACCAATCACAGTTTAGCAACCGGGATCTCCAGCATGTCGTTCTTC
TCTGACCGTCTCAGGAAGAGGGACCCCCTAGCTCCGTCCGATCTCACTGA
TGCGCAAAAAGTCACTATTTGCCAGCATCCTAAAGTTATTGAGCTTAGAA
GAGAGAAGAGAAAGCTGATGGAGCAGATGCGATCTCTGGCCGGCACAATA
GGGAAAGCCAAGGAGTCATTCCCTCAGCTTTATCGAAGCCATGAAGAAGT
TAAGAAGGAGCTTTCTCGGCTAAGGAAAAGTCTAGCAAACGACACGCAAG
AGACAATTGAACTTTGTTAAATGAATGACGATGTTCACGAACAGATGCGA
CGGTTCATCGAACATGTACTTCCTGCTAAGCGTAAAGTTCCCAGACGAAC
AGAGATTAAAAATACACTGGACGTGGCTGTTTTCAGTGTCCTCTACCGCC
ATCACTGGGTATATTCAAAGCATTTCCGTCACGGGAGTATGATTATTCAA
TTTGCCACGATCCAGCTCTGGTCCGCCATTACCGGGACTCGACCAGGCGT
GCTTCTTCCGCAGAACGTATCTCTAGCAGACAAGACGCTGAGCAAACGTA
AACGGGACCAAACTTTTAAGAGCGACCTCCCTAAATATGTCTCAGTGGAC
AATCTTCCGGCCTCAGTCTGCTACCGCGATATCGAGCTCTTCTATCTTAA
GGACCCAGATAGCAAGCGCGATGTACTTTGTGCCATCATCGAATTCCGTA
ATCTCAAAGGTCGGCCAGAGGGCGCTGATGGTACCAAATTCTTCAGGCAC
GGTGATTACCAACTAGCATCCTGCCCAATCAATCAGATCATCTCATTAGC
TTTTCGTGATGACGCTTTTCTCAATACCACCTTAACGCCAGAGCTTATTT
GGCGACTCCGAGTTCCGAAGCGCTCGCCATCTCTTCCTCCCCGTTGGAAG
CCGGAGAAACTAGACACTCCTCCTCTTCGCCGTCTTCACCACACTCCATA
TGGACTCTCAATGACGTATGACTCAAGTCCACAAGCGCTCCAAGAACTGG
GCCGGGATGCAGGGTTTGAGGATAATGTGGGTCATTATAACTACCGTCGG
TGGACGGCAAATGAAGTCAATCGGAACTTTACCAGTCAGGAGCGGCAAAG
GGTACTTGGCCAGTCTGGTGATGCGGTTTTGAAAAACACTACCAATCACA
GTTTAGCAACCGGGATCTCCAGCATGTCGTTCTTCTCTGACCGTCTCAGG
AAGAGGGACCCCCTAGCTCCGTCCGATCTCACTGATGCGCAAAAAGTCAC
TATTTGCCAGCATCCTAAAGTTATTGAGCTTAGAAGAGAGAAGAGAAAGC
TGATGGAGCAGATGCGATCTCTGGCCGGCACAATAGGGAAAGCCAAGGAG
TCATTCCCTCAGCTTTATCGAAGCCATGAAGAAGTTAAGAAGGAGCTTTC
TCGGCTAAGGAAAAGTCTAGCAAACGACACGCAAGAGACAATTGAACTTT
GTTAAATGAATGACGATGTTCACGAACAGATGCGACGGTTCATCGAACAT
GTACTTCCTGCTAAGCGTAAAGTTCCCAGACGAACAGAGATTAAAAATAC
ACTGGACGTGGCTGTTTTCAGTGTCCTCTACCGCCATCACTGGGTATATT
CAAAGCATTTCCGTCACGGGAGTATGATTATTCAATTTGCCACGATCCAG
CTCTGGTCCGCCATTACCGGGACTCGACCAGGCGTGCTTCTTCCGCAGAA
CGTATCTCTAGCAGACAAGACGCTGAGCAAACGTAAACGGGACCAAACTT
TTAAGAGCGACCTCCCTAAATATGTCTCAGTGGACAATCTTCCGGCCTCA
GTCTGCTACCGCGATATCGAGCTCTTCTATCTTAAGGACCCAGATAGCAA
GCGCGATGTACTTTGTGCCATCATCGAATTCCGTAATCTCAAAGGTCGGC
CAGAGGGCGCTGATGGTACCAAATTCTTCAGGCACGGTGATTACCAACTA
GCATCCTGCCCAATCAATCAGATCATCTCATTAGCTTTTCGTGATGACGC
TTTTCTCAATACCACCTTAACGCCAGAGCTTATTTGGCGACTCCGAGTTC
CGAAGCGCTCGCCATCTCTTCCTCCCCGTTGGAAGCCGGAGAAACTAGAC
ACTCCTCCTCTTCGCCGTCTTCACCACACTCCATATGGACTCTCAATGAC
GTATGACTCAAGTCCACAAGCGCTCCAAGAACTGGGCCGGGATGCAGGGT
TTGAGGATAATGTGGGTCATTATAACTACCGTCGGTGGACGGCAAATGAA
GTCAATCGGAACTTTACCAGTCAGGAGCGGCAAAGGGTACTTGGCCAGTC
TGGTGATGCGGTTTTGAAAAACACTACCAATCACAGTTTAGCAACCGGGA
TCTCCAGCATGTCGTTCTTCTCTGACCGTCTCAGGAAGAGGGACCCCCTA
GCTCCGTCCGATCTCACTGATGCGCAAAAAGTCACTATTTGCCAGCATCC
TAAAGTTATTGAGCTTAGAAGAGAGAAGAGAAAGCTGATGGAGCAGATGC
GATCTCTGGCCGGCACAATAGGGAAAGCCAAGGAGTCATTCCCTCAGCTT
TATCGAAGCCATGAAGAAGTTAAGAAGGAGCTTTCTCGGCTAAGGAAAAG
TCTAGCAAACGACACGCAAGAGACAATTGAACTTTGTTAAATGAATGACG
ATGTTCACGAACAGATGCGACGGTTCATCGAACATGTACTTCCTGCTAAG
CGTAAAGTTCCCAGACGAACAGAGATTAAAAATACACTGGACGTGGCTGT
TTTCAGTGTCCTCTACCGCCATCACTGGGTATATTCAAAGCATTTCCGTC
ACGGGAGTATGATTATTCAATTTGCCACGATCCAGCTCTGGTCCGCCATT
ACCGGGACTCGACCAGGCGTGCTTCTTCCGCAGAACGTATCTCTAGCAGA
CAAGACGCTGAGCAAACGTAAACGGGACCAAACTTTTAAGAGCGACCTCC
CTAAATATGTCTCAGTGGACAATCTTCCGGCCTCAGTCTGCTACCGCGAT
ATCGAGCTCTTCTATCTTAAGGACCCAGATAGCAAGCGCGATGTACTTTG
TGCCATCATCGAATTCCGTAATCTCAAAGGTCGGCCAGAGGGCGCTGATG
GTACCAAATTCTTCAGGCACGGTGATTACCAACTAGCATCCTGCCCAATC
AATCAGATCATCTCATTAGCTTTTCGTGATGACGCTTTTCTCAATACCAC
CTTAACGCCAGAGCTTATTTGGCGACTCCGAGTTCCGAAGCGCTCGCCAT
CTCTTCCTCCCCGTTGGAAGCCGGAGAAACTAGACACTCCTCCTCTTCGC
CGTCTTCACCACACTCCATATGGACTCTCAATGACGTATGACTCAAGTCC
ACAAGCGCTCCAAGAACTGGGCCGGGATGCAGGGTTTGAGGATAATGTGG
GTCATTATAACTACCGTCGGTGGACGGCAAATGAAGTCAATCGGAACTTT
ACCAGTCAGGAGCGGCAAAGGGTACTTGGCCAGTCTGGTGATGCGGTTTT
GAAAAACACTACCAATCACAGTTTAGCAACCGGGATCTCCAGCATGTCGT
TCTTCTCTGACCGTCTCAGGAAGAGGGACCCCCTAGCTCCGTCCGATCTC
ACTGATGCGCAAAAAGTCACTATTTGCCAGCATCCTAAAGTTATTGAGCT
TAGAAGAGAGAAGAGAAAGCTGATGGAGCAGATGCGATCTCTGGCCGGCA
CAATAGGGAAAGCCAAGGAGTCATTCCCTCAGCTTTATCGAAGCCATGAA
GAAGTTAAGAAGGAGCTTTCTCGGCTAAGGAAAAGTCTAGCAAACGACAC
GCAAGAGACAATTGAACTTTGTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001448-T2.utr3p1 | KJC3_001448-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021842 |
| DBxref | PFAM:PF11917 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3794823..3797794 + |
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