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KJC3_001475-T1, KJC3_001475-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001475-T1
Unique NameKJC3_001475-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3878634..3879192-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001475-T1 ID=KJC3_001475-T1|Name=KJC3_001475-T1|organism=Aspergillus niger KJC3|type=mRNA|length=559bp|location=Sequence derived from alignment at ch1:3878634..3879192- (Aspergillus niger KJC3)
ATGAACTTCGGTTTTTTCTACAATGACATCTATCAAGTCAAGATGAATTC
TGCAGGCACCAAGACCGCCGGCAGCGCTGCTTACAACATCGCCTTCAATG
TTACGAGCGACCACTCCGAGGAAGGGGCGTTCATGTATCAGTATGGCAGC
TATTTCTATCTCTTCTTCTCGTCAGGTGCATGCTGTGGCTACGATACCAA
TCGCCCTGCTGCTGGTGAGGAGTACAAGATTATGGTTTGTCGCAGCACCA
CAGCTACTGGAGGATTTGTAAGTGTTTCTCTGCGTGATGTCCTATTCTCC
ATTTGTTCCTACGCTAACATATAATTGTAAAAAATAGGTCGATACAGATG
GCAATGATTGCCAGGCGAGTGGCGGCTCTCTCGTCTTGAAGAGCCATGAT
AATATTTATGGACCTGGCGGTCAGGGTGTTTTCGATGATCCGGAATACGG
GACTATCCTTTACTACCACTACATCAACACTGAGGTCGGTTATGCTGATG
GTGATAAGCAATTTGGTTGGAACGTCGTTAACTGGTCTGACGGGTGGCCT
TCCGTGTAA
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Coding sequence (CDS) from alignment at ch1:3878634..3879192-

>KJC3_001475-T1 ID=KJC3_001475-T1|Name=KJC3_001475-T1|organism=Aspergillus niger KJC3|type=CDS|length=978bp|location=Sequence derived from alignment at ch1:3878634..3879192- (Aspergillus niger KJC3)
GTCGATACAGATGGCAATGATTGCCAGGCGAGTGGCGGCTCTCTCGTCTT
GAAGAGCCATGATAATATTTATGGACCTGGCGGTCAGGGTGTTTTCGATG
ATCCGGAATACGGGACTATCCTTTACTACCACTACATCAACACTGAGGTC
GGTTATGCTGATGGTGATAAGCAATTTGGTTGGAACGTCGTTAACTGGTC
TGACGGGTGGCCTTCCGTGTAAATGAACTTCGGTTTTTTCTACAATGACA
TCTATCAAGTCAAGATGAATTCTGCAGGCACCAAGACCGCCGGCAGCGCT
GCTTACAACATCGCCTTCAATGTTACGAGCGACCACTCCGAGGAAGGGGC
GTTCATGTATCAGTATGGCAGCTATTTCTATCTCTTCTTCTCGTCAGGTG
CATGCTGTGGCTACGATACCAATCGCCCTGCTGCTGGTGAGGAGTACAAG
ATTATGGTTTGTCGCAGCACCACAGCTACTGGAGGATTTGTCGATACAGA
TGGCAATGATTGCCAGGCGAGTGGCGGCTCTCTCGTCTTGAAGAGCCATG
ATAATATTTATGGACCTGGCGGTCAGGGTGTTTTCGATGATCCGGAATAC
GGGACTATCCTTTACTACCACTACATCAACACTGAGGTCGGTTATGCTGA
TGGTGATAAGCAATTTGGTTGGAACGTCGTTAACTGGTCTGACGGGTGGC
CTTCCGTGTAAATGAACTTCGGTTTTTTCTACAATGACATCTATCAAGTC
AAGATGAATTCTGCAGGCACCAAGACCGCCGGCAGCGCTGCTTACAACAT
CGCCTTCAATGTTACGAGCGACCACTCCGAGGAAGGGGCGTTCATGTATC
AGTATGGCAGCTATTTCTATCTCTTCTTCTCGTCAGGTGCATGCTGTGGC
TACGATACCAATCGCCCTGCTGCTGGTGAGGAGTACAAGATTATGGTTTG
TCGCAGCACCACAGCTACTGGAGGATTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001475KJC3_001475Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001475-T1KJC3_001475-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001475-T1.cdsKJC3_001475-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001475-T1.exon2KJC3_001475-T1.exon2Aspergillus niger KJC3exon
KJC3_001475-T1.exon1KJC3_001475-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteCAZy:GH43
NoteCAZy:GH43_3
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3878634..3879192 -
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