|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3890134..3891090+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001478-T1 ID=KJC3_001478-T1|Name=KJC3_001478-T1|organism=Aspergillus niger KJC3|type=mRNA|length=957bp|location=Sequence derived from alignment at ch1:3890134..3891090+ (Aspergillus niger KJC3)
ATGGCCGATGTGAAAATGTCCGCTGACTTGAACCTCTACGGCCCCCTTTC
CGGACCACCATCCACCACTAACGAGACTTGGCCGGGCTCTCTCTATCTGA
ACAACACCATCCCCCAAGACTGTTTTTCTCTTCCTTTGTTCGAAGATAAT
GACCAATGGCTTCTCAATTCCTTCTCGCCGCCCGTGTCTTCGGCCACTGG
ATCGGCTCTTCTAACGAACTTCACCGCTAGCTCGGAAGCCAGCTTCATCG
CTCCCTGCCAGATTGTACACAATCCTACTTGTGATTACGAGCAAAAGTCC
CCCCGAATACAGACTATCTTTGAGCAATTCGTACCAGCTCAGATGCCTCC
AACTCCCATTCACGAAATTACCTCGCGGGGTAGCATCACAAGTGTTAGCA
GCGGTGGTAGCGCCGACAGCAACCAATCTCGGTCCAGTGTTTCCAGCCAC
AGCAGCAGTAATGATAGTCCAGTATACAGTCGTCAAGAGAGCTCCCATCG
GCCTTCCTCTCCGGGGTCTGGGATGAACGAGCGCGAACGACGCAAACGGG
AGCGCTTCCTCGAGCGCAACCGCGTGGCTGCCAATAAATGTCGCAAGAAG
AAGAAGGAGCGTGCCAAGCAGCTGGAAAGACGCTGCGAGACGGTGTCGCA
GGAAAAAATGCTCTTGGAGAGCCAAGTCGATCACCTGCGGGGCGAAATTC
TAAGTCTCAAGAATGAGCTGCTGCGACATTCCCACTGTGGGGATGCGAGG
ATTAAGTGCCATTTGGCAAAGATGGTAAAGCAGCTTTCTAAAAAGACTGG
CACCACAAACCCGAGTCCAGAGGAAAAGAAAGAGTCATTACCCCCGACGG
ATAATCCCAAGCAGGAGCAGGAGATGACAATGGATCTTGAGGATCTGGTG
CAGCTTCCGGCTGCCGCGGATGGTTCAGTAACAGAAAGACAAAAAGATAT
TGAGTGA back to topCoding sequence (CDS) from alignment at ch1:3890134..3891090+ >KJC3_001478-T1 ID=KJC3_001478-T1|Name=KJC3_001478-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at ch1:3890134..3891090+ (Aspergillus niger KJC3)
ATGGCCGATGTGAAAATGTCCGCTGACTTGAACCTCTACGGCCCCCTTTC
CGGACCACCATCCACCACTAACGAGACTTGGCCGGGCTCTCTCTATCTGA
ACAACACCATCCCCCAAGACTGTTTTTCTCTTCCTTTGTTCGAAGATAAT
GACCAATGGCTTCTCAATTCCTTCTCGCCGCCCGTGTCTTCGGCCACTGG
ATCGGCTCTTCTAACGAACTTCACCGCTAGCTCGGAAGCCAGCTTCATCG
CTCCCTGCCAGATTGTACACAATCCTACTTGTGATTACGAGCAAAAGTCC
CCCCGAATACAGACTATCTTTGAGCAATTCGTACCAGCTCAGATGCCTCC
AACTCCCATTCACGAAATTACCTCGCGGGGTAGCATCACAAGTGTTAGCA
GCGGTGGTAGCGCCGACAGCAACCAATCTCGGTCCAGTGTTTCCAGCCAC
AGCAGCAGTAATGATAGTCCAGTATACAGTCGTCAAGAGAGCTCCCATCG
GCCTTCCTCTCCGGGGTCTGGGATGAACGAGCGCGAACGACGCAAACGGG
AGCGCTTCCTCGAGCGCAACCGCGTGGCTGCCAATAAATGTCGCAAGAAG
AAGAAGGAGCGTGCCAAGCAGCTGGAAAGACGCTGCGAGACGGTGTCGCA
GGAAAAAATGCTCTTGGAGAGCCAAGTCGATCACCTGCGGGGCGAAATTC
TAAGTCTCAAGAATGAGCTGCTGCGACATTCCCACTGTGGGGATGCGAGG
ATTAAGTGCCATTTGGCAAAGATGGTAAAGCAGCTTTCTAAAAAGACTGG
CACCACAAACCCGAGTCCAGAGGAAAAGAAAGAGTCATTACCCCCGACGG
ATAATCCCAAGCAGGAGCAGGAGATGACAATGGATCTTGAGGATCTGGTG
CAGCTTCCGGCTGCCGCGGATGGTTCAGTAACAGAAAGACAAAAAGATAT
TGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | InterPro:IPR002112 |
| DBxref | PFAM:PF07716 |
| DBxref | PFAM:PF00170 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3890134..3891090 + |
|
