You are here

Home

KJC3_001480-T1, KJC3_001480-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001480-T1
Unique NameKJC3_001480-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3893867..3894317+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001480-T1 ID=KJC3_001480-T1|Name=KJC3_001480-T1|organism=Aspergillus niger KJC3|type=mRNA|length=451bp|location=Sequence derived from alignment at ch1:3893867..3894317+ (Aspergillus niger KJC3)
ATGAATGAAAAAGTGACCCTGCGACCTTTGCTACCGGCGGCGAAAGCCTT
ACACTCTGAACCGAGCTATAGCAAGCCAAAAGAAAAACGGCAGAGCGTCG
CATGCAGAGCTTGTCGCGCAAAGCGGAGAAAGGTTCGTTCATCTCAAACA
TTGTTTACTCTTGAACCTTATTGATGGGTATTAGTGTACTGGTGCACCAA
TTTGCCAGTCATGCGTGAGATTGAAATTAGCTTGCGACTTTGAGCCATAC
AAAGATAAACGCAAGAAATTGGCGCTACAACATGTAGAGAATGCCAGGCA
ACGACTTGAGATCCTTTTGGAGCTTCTGCTTACATTCTTAAACAAGGAGG
AAGACGAGACGATTCTTGAATGGAGAAAATGCCTGAAAGACACCCCGTCA
CTTGAAATGATGATCGCAGACCTAGAAAGAAGAAAAGAACCAGGCTTATG
A
back to top

Coding sequence (CDS) from alignment at ch1:3893867..3894317+

>KJC3_001480-T1 ID=KJC3_001480-T1|Name=KJC3_001480-T1|organism=Aspergillus niger KJC3|type=CDS|length=798bp|location=Sequence derived from alignment at ch1:3893867..3894317+ (Aspergillus niger KJC3)
ATGAATGAAAAAGTGACCCTGCGACCTTTGCTACCGGCGGCGAAAGCCTT
ACACTCTGAACCGAGCTATAGCAAGCCAAAAGAAAAACGGCAGAGCGTCG
CATGCAGAGCTTGTCGCGCAAAGCGGAGAAAGTGTACTGGTGCACCAATT
TGCCAGTCATGCGTGAGATTGAAATTAGCTTGCGACTTTGAGCCATACAA
AGATAAACGCAAGAAATTGGCGCTACAACATGTAGAGAATGCCAGGCAAC
GACTTGAGATCCTTTTGGAGCTTCTGCTTACATTCTTAAACAAGGAGGAA
GACGAGACGATTCTTGAATGGAGAAAATGCCTGAAAGACACCCCGTCACT
TGAAATGATGATCGCAGACCTAGAAAGAAGAAAAGAACCAGGCTTATGAA
TGAATGAAAAAGTGACCCTGCGACCTTTGCTACCGGCGGCGAAAGCCTTA
CACTCTGAACCGAGCTATAGCAAGCCAAAAGAAAAACGGCAGAGCGTCGC
ATGCAGAGCTTGTCGCGCAAAGCGGAGAAAGTGTACTGGTGCACCAATTT
GCCAGTCATGCGTGAGATTGAAATTAGCTTGCGACTTTGAGCCATACAAA
GATAAACGCAAGAAATTGGCGCTACAACATGTAGAGAATGCCAGGCAACG
ACTTGAGATCCTTTTGGAGCTTCTGCTTACATTCTTAAACAAGGAGGAAG
ACGAGACGATTCTTGAATGGAGAAAATGCCTGAAAGACACCCCGTCACTT
GAAATGATGATCGCAGACCTAGAAAGAAGAAAAGAACCAGGCTTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001480KJC3_001480Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001480-T1.exon1KJC3_001480-T1.exon1Aspergillus niger KJC3exon
KJC3_001480-T1.exon2KJC3_001480-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001480-T1.cdsKJC3_001480-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001480-T1KJC3_001480-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3893867..3894317 +
Powered by Drupal