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KJC3_001484-T1, KJC3_001484-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001484-T1
Unique NameKJC3_001484-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3917241..3917789+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001484-T1 ID=KJC3_001484-T1|Name=KJC3_001484-T1|organism=Aspergillus niger KJC3|type=mRNA|length=549bp|location=Sequence derived from alignment at ch1:3917241..3917789+ (Aspergillus niger KJC3)
ATGTCAATCTCCGCCATTGTGAATCAACAGGTTGCAGAAATCCGCGACTT
GGTTCAACACAGCCCAAAACGGGATAAGCAGTCGGGCAGAAAACCGGGAA
GGGTTATATTGCAGCCCTGTCAGCCTGAGCACTTGGTTGTTGGTCATGAA
GCATCATCGAGCAGCATTCTACATGGCTTACCAAAAGGCTATCAGTCTAC
TGAGAGGCCTCTGGGTTACGAGGAATATCCGGGAGTCGTCCAGCCTTCAC
CACCCCCATACCGGCACACGTTCGAGCGGGTCCAGTTCCAGAAGGCGACC
GCGAACAACGGAAAGCGGCGAGCCCAGCAGCAGTACTACAATCTAGTCGT
TGAACTCTATGCTGAGGTCGCCAGCTCTGCTCGGGGAACTGAAAGCCAGT
GGATCCGGGTTGCCAGGCGACTATCGCATCCAATGGTAGTCCGGGGTCGC
TCTCCAAATCACTTCAAAAACAACCGCCGCGACAGTCCGGCAAGCATGGG
TCTCTCAAAAGGAGTAAAAAGTAACCACGAAGACCAGCATAGTACATGA
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Coding sequence (CDS) from alignment at ch1:3917241..3917789+

>KJC3_001484-T1 ID=KJC3_001484-T1|Name=KJC3_001484-T1|organism=Aspergillus niger KJC3|type=CDS|length=549bp|location=Sequence derived from alignment at ch1:3917241..3917789+ (Aspergillus niger KJC3)
ATGTCAATCTCCGCCATTGTGAATCAACAGGTTGCAGAAATCCGCGACTT
GGTTCAACACAGCCCAAAACGGGATAAGCAGTCGGGCAGAAAACCGGGAA
GGGTTATATTGCAGCCCTGTCAGCCTGAGCACTTGGTTGTTGGTCATGAA
GCATCATCGAGCAGCATTCTACATGGCTTACCAAAAGGCTATCAGTCTAC
TGAGAGGCCTCTGGGTTACGAGGAATATCCGGGAGTCGTCCAGCCTTCAC
CACCCCCATACCGGCACACGTTCGAGCGGGTCCAGTTCCAGAAGGCGACC
GCGAACAACGGAAAGCGGCGAGCCCAGCAGCAGTACTACAATCTAGTCGT
TGAACTCTATGCTGAGGTCGCCAGCTCTGCTCGGGGAACTGAAAGCCAGT
GGATCCGGGTTGCCAGGCGACTATCGCATCCAATGGTAGTCCGGGGTCGC
TCTCCAAATCACTTCAAAAACAACCGCCGCGACAGTCCGGCAAGCATGGG
TCTCTCAAAAGGAGTAAAAAGTAACCACGAAGACCAGCATAGTACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001484KJC3_001484Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001484-T1.exon1KJC3_001484-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001484-T1.cdsKJC3_001484-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001484-T1KJC3_001484-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008967
DBxrefInterPro:IPR037141
DBxrefInterPro:IPR024061
DBxrefPFAM:PF05224
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3917241..3917789 +
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