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KJC3_001485-T1, KJC3_001485-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001485-T1
Unique NameKJC3_001485-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3922005..3923765+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001485-T1 ID=KJC3_001485-T1|Name=KJC3_001485-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1761bp|location=Sequence derived from alignment at ch1:3922005..3923765+ (Aspergillus niger KJC3)
CCCGACTAGAAGTGCAGGGATGACCCGCGGAGTACAGTACAGTAGTGATC
AACGAGGACTTTCTTTGCGGGCCGTCTCCCTCCTTTTGGTCGTCAGAACT
TGCCAAAGGATCTGGATGCCTTAGGCAGGATATGTTTTCGACTCATCCGT
GTCATAGATACGTAAAGACGTCTTCTGAACGCCAAAAGTATATTTTACTT
CACTAAACTTGTTCCACACTCAAAAAGAGCACCAGCAAAGGAAAAGCAAA
TCTCCTAGCATCAAGATCAATTGCCAAAGAAATGACAATTATCAGCGTCC
AGAGCATCGCTTCTTCCAAAAGGCACTTTCAACGCCCGAATGTCGATCGA
TCTTGGAACCGGTGGTGCGTTTGTGGCGAACAGAAGCCTGTGGCGCGTTC
GCGCGGCGAGCTGCGGCGACATTGGGAGCATCACACGACCGAGATAATGA
GATAATGTTCTTCTTCCTCAATCTGCTCCCTTGATCTGTTCGCTCATCCC
CCAACTAGTCGTCGCGAGACTTTTCTACGTTCTCGCGATGATGAGCGTGG
GGACCGAGAGACCGGAGGACATGGTTAGAAAGGAGTTATTGATCAACAGG
ATAGGAATTATAATGATGCACCTGAATATAACTCGCCGCCAGGTCTGAAA
GATTGATGCTCTCCAATATATTTCGGTACTTTATATGACCTTTAGTGACA
TCAGAGAATTCCAGAGTTTCAATTATAACGTCATCCTTGCGCAAATGGCC
TTATCGCATCCCGAACGGGAAATGCTTGCTGTTCGGCCACCCATCAATAA
TCGGCCATCCTCCGCGACAATAGCCTTCCATCAACAGAAATAGGCATTGG
CTCGGTTCGTTACGGAGCGTGACTTTCAAGTTACTTACGATGTCTATTCT
TAGGTAAGGGTTTGGCCTTCGGAAGGTGGTCTTGTACGTGAGAAAGTCAT
TAGTAATGACCAGTGCGTGTCTCTCTGGTTACACTCAAATTGGATCATCG
AATTTTAACCGAGTCTTCTATGATGCATCCAATAATCACACTGACGTATG
TGCCGCGCATGCCTACATAGATTGCTATATAACAGGCTGACCCAACGTTG
ACAACATGTCCTGGTTCTGATGCACTCATAATCTAATCCAACCATCTTTC
TCAATGTCTACCGAGGAGAGACTAAACGCCATGCGTGGCTACAAAGCGTC
AGTTTCACGAACCCTTTTGTTCTTCAGCCGGGTACTTATGCCATAAAAAC
AGCACCCTGAGCAATCCCCACACCTCTGATGAAGCCAAACAGAACGCTCA
GGCAATGCTGGAACAGCTTGGAGGAGACCAGCCTCGCGATGAACTATATG
GTCAGACCGAACGTGGAAAAGATCCTAGTCGTGTTATGAGCGGATTAAAG
GCGTATGGAATATTTCCCCCTCTGGTCTTTCAATCTAAGCGATACTAACT
TCTGTGGAATCAAAGCGCACGTCATAATCCGAATGTGACGGACTCTGGCC
GTCAGAAGGCGGAGGAGAAGTTGATGGACCGGAACGAACTTCCAGAGGAG
TAATTGGTCGTGCAGGAGTATTTTAGGCATATCGGTATCATCTATCAAGT
TATCCACAATGTATAGATACTTCCATGGTACTCTATTTGAAGCTTAATAA
CGATACGTCTGATAGCAAACCATCTATTTTAATATGACGAGCGGGAGCAT
TCATACGGCGTCATGATGTATCATATGTGTTATAGTACAAAATGTTGAAC
AACTCCTCCAG
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Coding sequence (CDS) from alignment at ch1:3922005..3923765+

>KJC3_001485-T1 ID=KJC3_001485-T1|Name=KJC3_001485-T1|organism=Aspergillus niger KJC3|type=CDS|length=846bp|location=Sequence derived from alignment at ch1:3922005..3923765+ (Aspergillus niger KJC3)
ATGTCTACCGAGGAGAGACTAAACGCCATGCGTGGCTACAAAGCCACCCT
GAGCAATCCCCACACCTCTGATGAAGCCAAACAGAACGCTCAGGCAATGC
TGGAACAGCTTGGAGGAGACCAGCCTCGCGATGAACTATATGGTCAGACC
GAACGTGGAAAAGATCCTAGTCGTGTTATGAGCGGATTAAAGGCCGCACG
TCATAATCCGAATGTGACGGACTCTGGCCGTCAGAAGGCGGAGGAGAAGT
TGATGGACCGGAACGAACTTCCAGAGGAGTAAATGTCTACCGAGGAGAGA
CTAAACGCCATGCGTGGCTACAAAGCCACCCTGAGCAATCCCCACACCTC
TGATGAAGCCAAACAGAACGCTCAGGCAATGCTGGAACAGCTTGGAGGAG
ACCAGCCTCGCGATGAACTATATGGTCAGACCGAACGTGGAAAAGATCCT
AGTCGTGTTATGAGCGGATTAAAGGCCGCACGTCATAATCCGAATGTGAC
GGACTCTGGCCGTCAGAAGGCGGAGGAGAAGTTGATGGACCGGAACGAAC
TTCCAGAGGAGTAAATGTCTACCGAGGAGAGACTAAACGCCATGCGTGGC
TACAAAGCCACCCTGAGCAATCCCCACACCTCTGATGAAGCCAAACAGAA
CGCTCAGGCAATGCTGGAACAGCTTGGAGGAGACCAGCCTCGCGATGAAC
TATATGGTCAGACCGAACGTGGAAAAGATCCTAGTCGTGTTATGAGCGGA
TTAAAGGCCGCACGTCATAATCCGAATGTGACGGACTCTGGCCGTCAGAA
GGCGGAGGAGAAGTTGATGGACCGGAACGAACTTCCAGAGGAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001485KJC3_001485Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001485-T1KJC3_001485-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001485-T1.utr5p1KJC3_001485-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_001485-T1.utr5p2KJC3_001485-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001485-T1.utr5p3KJC3_001485-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001485-T1.exon1KJC3_001485-T1.exon1Aspergillus niger KJC3exon
KJC3_001485-T1.exon2KJC3_001485-T1.exon2Aspergillus niger KJC3exon
KJC3_001485-T1.exon3KJC3_001485-T1.exon3Aspergillus niger KJC3exon
KJC3_001485-T1.exon4KJC3_001485-T1.exon4Aspergillus niger KJC3exon
KJC3_001485-T1.exon5KJC3_001485-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001485-T1.cdsKJC3_001485-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001485-T1.utr3p1KJC3_001485-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018824
DBxrefPFAM:PF10346
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3922005..3923765 +
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