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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3929972..3932682+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001487-T1 ID=KJC3_001487-T1|Name=KJC3_001487-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2711bp|location=Sequence derived from alignment at ch1:3929972..3932682+ (Aspergillus niger KJC3)
ATGCAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCCCATCCAGGCAGTTT
CCCCAGGATACGCTTGCTCCGAGCGGATGCCATACATCAGCTGTTTGAAC
GAATTGCGGATCATATCTTCCACAACGGCATTGACAAACTGCCGATCTCA
AGGCAGCCAGAAGCACAACGACGCGCGGCTATCGCTTATTGCCTTAACCC
TGACCCGTCAAAACCGGAGATTGCTGCAGTGGAAAACCCAGATGCGGCTG
GCTTAGGGGCCGGCAGCACGAGGGATCCTCTCCTACTACTCCGGGGTCTG
CTGGCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGAGAGT
CAACTACGGACTTGATCGCTCCCGGCAACCCCCTACAAGGCTGGCGGTTC
CGTATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCACCCC
GATGTTGTCATTGTGCTGACGTGCCTGAGCTATTACTATGAGGGACTCGG
CGACGAGGACCTGTTTCGAGCATTCGACCATCTGGTCGGCTCGGATCAAG
CTGACGCGGAGTATCAGATATGGGTCGATGATGCCCCGACTCTCCCCCCG
GCTTATCGTCAATTAGTGGGCGTCAATCTCCAGGACCGGCTCCATTGCAT
GGAATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATCGATTACT
TCCTGGCTCATATGATTTTCGCCAAAGGCCTAAGGGAGTTTCCGAGCAAA
TTATCTTCTTCTGGATGGAATATCGGTGAGGTCAAGTGCCATCCCACCGT
CGGCTTTAGCGGGACCAACGATTCCCGGGTTACCCTTCCACTCAGTGTGG
AGCAGCTGGATCTACCTGACCAGAACCACACCAATGCGTTAGTTCTCGAA
TATCTCCTTCGACCAGAGACTGGCATTGCCCTGATTCCGACCCGAGATGA
CCTGTCCAAGTCCGATGCGCAGGTCCTTCTAGATATGGTGGCGGAACTGA
GTTCACCCGTACGCGTGATTCTGGACGTGGGAGCTCGGATATTAGAGTTG
AGTAACCTGGATGTTGCGAAGACCTGGTTAAAGATGGTCCGCGATGATGG
TCGAACGCAGGCTGTGGTCTTTATCAACGACGACGACGATATTGCCGTGG
TAGATCGGACCGGACTCGTCGAACTGCTGCAGACATCACCTTTCCAACGA
CACCTCGATCAATGCCTTGTGTTCCTTGACGAAGCACACACGAGAGGGAT
TGATCTGCAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGACCGA
ATATCACGAAAGACAAGCTGGTTCAAGGTGAGGGAGCCCCGCTGGAACGG
TCAAATGCACGTCTCACTAACAGCTATTCACAGCCTGCATGAGGATGAGG
AAGTTAGGCAAAGGACAATCGGTCGTGTTTTGCATACCGGAAGAGATCAA
GTTCAAGATTCTGACTCTCTGTGGGAGGACCCACGAATCTGATCTTACCG
TAGCAGACGTGCTCCGCTGGGCAATTTCGGAAACCTGGGACGATATGCAA
CGCAGCATACCTTTGTGGGCCGTGCAGGGAAAGCGATATCAGGCCCAGGC
CCGTCAGTGGCGGGTGTTGCGACAGGACGGGCAAACCTCGATATCAACAT
CTCAGGCAGAGGGTTTTCTGGAACCGGAATCCCAGTCGCTTGAACAGCGG
TATAGTCCCGGTGGTAATCATGGCCTTTCTCTTTCCTCCCAATGCCCGGA
CGATGCGGACGCGCGGCGCATACTGGACCGATGCCGGGAGTTTGCAACTG
TGAAGCTCTCGGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAGCTAGCC
CCAGAGATTGAGCAGGAACGACAAGCTCAACGTCCGGCTCCTGCCGAACC
GGAACCGCATTCTGTGCATCCTGATATACTCTCGTTCGTGACCACTGGAC
ACCTGGATGCATCATCCGACGCCGTGAAACCAGCGTTTATGGTGTTGAAA
GATACATCGGCGGCGAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCT
CCTTGTCACCGTTGATTTTGCGAGAACAGTCCGACTGCCTAGATTATCTG
CCCGGGATAGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGC
CATCCCTCCGAGGACGGAACGCCCGTAGGGCACATGGTGATCATCAGCCC
GTATGAAGCGGACAAGCTTCATGCTGACATTCGCGGGTCTAGCGCAGTAA
CTCTGCATGTATACGCACCTCGGCAGAACCAGAGTTCGTACCCTATCGAT
AAGCTCGATCTGTACACGATTCCGAAAAATTTAAGCACAAGGCCCCTGCG
AGTCCCTGAGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCT
ATATTTCGTCGTACAACGAGTATTGTGAGATATGCCGCTTTCTAGGAGTT
GCATTTACTGCCGCACCAGAGGGCTTGGTTGTCGCCGCGGATGGGTTCAT
CGTGGAGAATCAACAGGCAGGAGCCAAATTCACCCAAAGCCCCCTCAAAT
TTCTCAAGCTGTTCTTGTCACAGATACGGAAGGACGGGCAGGAAATTGAC
AAGACCCACCTTGGGAAGATCCTAGACGGAAAACTGTTACTCATGGCGGA
CTTCCAAGATTTCAATGGCAGAGCTCGGACCATGCAGCTGAGCCTTCGAA
ATGCTCGATGA back to topCoding sequence (CDS) from alignment at ch1:3929972..3932682+ >KJC3_001487-T1 ID=KJC3_001487-T1|Name=KJC3_001487-T1|organism=Aspergillus niger KJC3|type=CDS|length=5310bp|location=Sequence derived from alignment at ch1:3929972..3932682+ (Aspergillus niger KJC3)
ATGCAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCCCATCCAGGCAGTTT
CCCCAGGATACGCTTGCTCCGAGCGGATGCCATACATCAGCTGTTTGAAC
GAATTGCGGATCATATCTTCCACAACGGCATTGACAAACTGCCGATCTCA
AGGCAGCCAGAAGCACAACGACGCGCGGCTATCGCTTATTGCCTTAACCC
TGACCCGTCAAAACCGGAGATTGCTGCAGTGGAAAACCCAGATGCGGCTG
GCTTAGGGGCCGGCAGCACGAGGGATCCTCTCCTACTACTCCGGGGTCTG
CTGGCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGAGAGT
CAACTACGGACTTGATCGCTCCCGGCAACCCCCTACAAGGCTGGCGGTTC
CGTATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCACCCC
GATGTTGTCATTGTGCTGACGTGCCTGAGCTATTACTATGAGGGACTCGG
CGACGAGGACCTGTTTCGAGCATTCGACCATCTGGTCGGCTCGGATCAAG
CTGACGCGGAGTATCAGATATGGGTCGATGATGCCCCGACTCTCCCCCCG
GCTTATCGTCAATTAGTGGGCGTCAATCTCCAGGACCGGCTCCATTGCAT
GGAATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATCGATTACT
TCCTGGCTCATATGATTTTCGCCAAAGGCCTAAGGGAGTTTCCGAGCAAA
TTATCTTCTTCTGGATGGAATATCGGTGAGGTCAAGTGCCATCCCACCGT
CGGCTTTAGCGGGACCAACGATTCCCGGGTTACCCTTCCACTCAGTGTGG
AGCAGCTGGATCTACCTGACCAGAACCACACCAATGCGTTAGTTCTCGAA
TATCTCCTTCGACCAGAGACTGGCATTGCCCTGATTCCGACCCGAGATGA
CCTGTCCAAGTCCGATGCGCAGGTCCTTCTAGATATGGTGGCGGAACTGA
GTTCACCCGTACGCGTGATTCTGGACGTGGGAGCTCGGATATTAGAGTTG
AGTAACCTGGATGTTGCGAAGACCTGGTTAAAGATGGTCCGCGATGATGG
TCGAACGCAGGCTGTGGTCTTTATCAACGACGACGACGATATTGCCGTGG
TAGATCGGACCGGACTCGTCGAACTGCTGCAGACATCACCTTTCCAACGA
CACCTCGATCAATGCCTTGTGTTCCTTGACGAAGCACACACGAGAGGGAT
TGATCTGCAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGACCGA
ATATCACGAAAGACAAGCTGGTTCAAGCCTGCATGAGGATGAGGAAGTTA
GGCAAAGGACAATCGGTCGTGTTTTGCATACCGGAAGAGATCAAGTTCAA
GATTCTGACTCTCTGTGGGAGGACCCACGAATCTGATCTTACCGTAGCAG
ACGTGCTCCGCTGGGCAATTTCGGAAACCTGGGACGATATGCAACGCAGC
ATACCTTTGTGGGCCGTGCAGGGAAAGCGATATCAGGCCCAGGCCCGTCA
GTGGCGGGTGTTGCGACAGGACGGGCAAACCTCGATATCAACATCTCAGG
CAGAGGGTTTTCTGGAACCGGAATCCCAGTCGCTTGAACAGCGGTATAGT
CCCGGTGGTAATCATGGCCTTTCTCTTTCCTCCCAATGCCCGGACGATGC
GGACGCGCGGCGCATACTGGACCGATGCCGGGAGTTTGCAACTGTGAAGC
TCTCGGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAGCTAGCCCCAGAG
ATTGAGCAGGAACGACAAGCTCAACGTCCGGCTCCTGCCGAACCGGAACC
GCATTCTGTGCATCCTGATATACTCTCGTTCGTGACCACTGGACACCTGG
ATGCATCATCCGACGCCGTGAAACCAGCGTTTATGGTGTTGAAAGATACA
TCGGCGGCGAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCTCCTTGT
CACCGTTGATTTTGCGAGAACAGTCCGACTGCCTAGATTATCTGCCCGGG
ATAGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGCCATCCC
TCCGAGGACGGAACGCCCGTAGGGCACATGGTGATCATCAGCCCGTATGA
AGCGGACAAGCTTCATGCTGACATTCGCGGGTCTAGCGCAGTAACTCTGC
ATGTATACGCACCTCGGCAGAACCAGAGTTCGTACCCTATCGATAAGCTC
GATCTGTACACGATTCCGAAAAATTTAAGCACAAGGCCCCTGCGAGTCCC
TGAGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCTATATTT
CGTCGTACAACGAGTATTGTGAGATATGCCGCTTTCTAGGAGTTGCATTT
ACTGCCGCACCAGAGGGCTTGGTTGTCGCCGCGGATGGGTTCATCGTGGA
GAATCAACAGGCAGGAGCCAAATTCACCCAAAGCCCCCTCAAATTTCTCA
AGCTGTTCTTGTCACAGATACGGAAGGACGGGCAGGAAATTGACAAGACC
CACCTTGGGAAGATCCTAGACGGAAAACTGTTACTCATGGCGGACTTCCA
AGATTTCAATGGCAGAGCTCGGACCATGCAGCTGAGCCTTCGAAATGCTC
GATGAATGCAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCCCATCCAGGC
AGTTTCCCCAGGATACGCTTGCTCCGAGCGGATGCCATACATCAGCTGTT
TGAACGAATTGCGGATCATATCTTCCACAACGGCATTGACAAACTGCCGA
TCTCAAGGCAGCCAGAAGCACAACGACGCGCGGCTATCGCTTATTGCCTT
AACCCTGACCCGTCAAAACCGGAGATTGCTGCAGTGGAAAACCCAGATGC
GGCTGGCTTAGGGGCCGGCAGCACGAGGGATCCTCTCCTACTACTCCGGG
GTCTGCTGGCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGG
AGAGTCAACTACGGACTTGATCGCTCCCGGCAACCCCCTACAAGGCTGGC
GGTTCCGTATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTC
ACCCCGATGTTGTCATTGTGCTGACGTGCCTGAGCTATTACTATGAGGGA
CTCGGCGACGAGGACCTGTTTCGAGCATTCGACCATCTGGTCGGCTCGGA
TCAAGCTGACGCGGAGTATCAGATATGGGTCGATGATGCCCCGACTCTCC
CCCCGGCTTATCGTCAATTAGTGGGCGTCAATCTCCAGGACCGGCTCCAT
TGCATGGAATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATCGA
TTACTTCCTGGCTCATATGATTTTCGCCAAAGGCCTAAGGGAGTTTCCGA
GCAAATTATCTTCTTCTGGATGGAATATCGGTGAGGTCAAGTGCCATCCC
ACCGTCGGCTTTAGCGGGACCAACGATTCCCGGGTTACCCTTCCACTCAG
TGTGGAGCAGCTGGATCTACCTGACCAGAACCACACCAATGCGTTAGTTC
TCGAATATCTCCTTCGACCAGAGACTGGCATTGCCCTGATTCCGACCCGA
GATGACCTGTCCAAGTCCGATGCGCAGGTCCTTCTAGATATGGTGGCGGA
ACTGAGTTCACCCGTACGCGTGATTCTGGACGTGGGAGCTCGGATATTAG
AGTTGAGTAACCTGGATGTTGCGAAGACCTGGTTAAAGATGGTCCGCGAT
GATGGTCGAACGCAGGCTGTGGTCTTTATCAACGACGACGACGATATTGC
CGTGGTAGATCGGACCGGACTCGTCGAACTGCTGCAGACATCACCTTTCC
AACGACACCTCGATCAATGCCTTGTGTTCCTTGACGAAGCACACACGAGA
GGGATTGATCTGCAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGG
ACCGAATATCACGAAAGACAAGCTGGTTCAAGCCTGCATGAGGATGAGGA
AGTTAGGCAAAGGACAATCGGTCGTGTTTTGCATACCGGAAGAGATCAAG
TTCAAGATTCTGACTCTCTGTGGGAGGACCCACGAATCTGATCTTACCGT
AGCAGACGTGCTCCGCTGGGCAATTTCGGAAACCTGGGACGATATGCAAC
GCAGCATACCTTTGTGGGCCGTGCAGGGAAAGCGATATCAGGCCCAGGCC
CGTCAGTGGCGGGTGTTGCGACAGGACGGGCAAACCTCGATATCAACATC
TCAGGCAGAGGGTTTTCTGGAACCGGAATCCCAGTCGCTTGAACAGCGGT
ATAGTCCCGGTGGTAATCATGGCCTTTCTCTTTCCTCCCAATGCCCGGAC
GATGCGGACGCGCGGCGCATACTGGACCGATGCCGGGAGTTTGCAACTGT
GAAGCTCTCGGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAGCTAGCCC
CAGAGATTGAGCAGGAACGACAAGCTCAACGTCCGGCTCCTGCCGAACCG
GAACCGCATTCTGTGCATCCTGATATACTCTCGTTCGTGACCACTGGACA
CCTGGATGCATCATCCGACGCCGTGAAACCAGCGTTTATGGTGTTGAAAG
ATACATCGGCGGCGAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCTC
CTTGTCACCGTTGATTTTGCGAGAACAGTCCGACTGCCTAGATTATCTGC
CCGGGATAGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGCC
ATCCCTCCGAGGACGGAACGCCCGTAGGGCACATGGTGATCATCAGCCCG
TATGAAGCGGACAAGCTTCATGCTGACATTCGCGGGTCTAGCGCAGTAAC
TCTGCATGTATACGCACCTCGGCAGAACCAGAGTTCGTACCCTATCGATA
AGCTCGATCTGTACACGATTCCGAAAAATTTAAGCACAAGGCCCCTGCGA
GTCCCTGAGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCTA
TATTTCGTCGTACAACGAGTATTGTGAGATATGCCGCTTTCTAGGAGTTG
CATTTACTGCCGCACCAGAGGGCTTGGTTGTCGCCGCGGATGGGTTCATC
GTGGAGAATCAACAGGCAGGAGCCAAATTCACCCAAAGCCCCCTCAAATT
TCTCAAGCTGTTCTTGTCACAGATACGGAAGGACGGGCAGGAAATTGACA
AGACCCACCTTGGGAAGATCCTAGACGGAAAACTGTTACTCATGGCGGAC
TTCCAAGATTTCAATGGCAGAGCTCGGACCATGCAGCTGAGCCTTCGAAA
TGCTCGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022105 |
| DBxref | PFAM:PF12359 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3929972..3932682 + |
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