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KJC3_001491-T1, KJC3_001491-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001491-T1
Unique NameKJC3_001491-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3942738..3944612-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001491-T1 ID=KJC3_001491-T1|Name=KJC3_001491-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1875bp|location=Sequence derived from alignment at ch1:3942738..3944612- (Aspergillus niger KJC3)
ATGCTGCTGCTGGACCTACCGGGTGAGCTCTTACTTTGTGTCATGGACCA
TCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCATG
TATATCGACAGCTGTTACCGGCGCTCTATCGCTTCAACATACGATTCCAA
AACAGCTCGGCGCTGCACTGGGCAGCGCGTTATGGTAAGCTGGAACTTAT
CCAGACGATGTGTGTTTACCGGGCCCGCGTCAATGTGTATCTCCATGGCT
ACACACCTCTTCATTTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAGA
TGGCTGCTCTCGTACGACGGCATCGATGTCAACTGCCGCGGCGAGGGTCT
GGGCTTGACCCCGCTTGGTGTGGCGGTGCGGAAGAAGGATGTAGAGGTTG
TTCAGGTGTTGCTTTCAGACGCCCGTACGGATATCAACGCAGGAAGCAGG
GACAACAAGACACCGCTGCTGGACGCTATCAAGCATCGGCACCTCGTCAT
TCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATGCATCCTCAGAGCC
AGTCAGCCTCGCCATTGCTGTACGCCATGCGCGCAGACTTCGGCAGCGGC
GGTCGCGCGCTCCTAGCGCATGGCGACATTGACATCTCAGCACGAGACCG
GAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCGCAACGACGACGGAC
TTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGAT
TGGCTTGGTATGACCGCCCTGCATCGTGCCATCATCAAAGACTATAGACA
GATCGCCGCCATGCTCCTGACGCGCAGTGATCTTGATGTCTCGATTTCCG
GTGCCGATGGGCACTGGAAGATATACGAAGAAATGCCGCCATTATGTCTG
GCCGTTGCCCTCCGTAGGGACCACATTTGCCAGCTTCTCCTGGAAGCTCC
TACGAATGCCGATGTTCGCACGGCAAGCGGGAATTCCCCCTTACATCTAG
CCGCAAGCATGGCGGATCTTGATTTGCTCACGCTATTGCTCAACCAACCA
GACATCAAGCTAAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATGA
AGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCGC
CAGGGGTGGATGCAAATGTGGGAGATACATGCGGGCAGACCGCACTCTGG
TGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGCGACTGCTATGCGA
AGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTTC
ATCATGCGGTCCAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTGC
GAGGAGAGACTGGATATCAATGTACCGGACATGACCGGTTGGACTCCACT
TGTGTGGGCCGTGCATCAAGCGGACATCGACATGGTCAGACTGTTGCTTG
CGAGAGACGATCTGCAGCTGGATCCAATCTTCGCGGGAAACGCATCGGCA
CTGGGCCTGGCAGCGGAACGAGGCCACACCAAGATTGTGAACTTATTCCT
CGAGCACCGGGATCGCTTGGACATTAATCTCCCAACCCAGGCAGGCGAGA
CCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGATGTCGTCGATCTC
CTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGACG
CAGTCCGCTGTGCTGGGCGGTGTATGCGGGACATTTCAACGTTGTGAGAC
GTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCGA
CCAGCACTGGCAGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATCT
TCTTGAGGCATATAGACTCGGATGA
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Coding sequence (CDS) from alignment at ch1:3942738..3944612-

>KJC3_001491-T1 ID=KJC3_001491-T1|Name=KJC3_001491-T1|organism=Aspergillus niger KJC3|type=CDS|length=1875bp|location=Sequence derived from alignment at ch1:3942738..3944612- (Aspergillus niger KJC3)
ATGCTGCTGCTGGACCTACCGGGTGAGCTCTTACTTTGTGTCATGGACCA
TCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCATG
TATATCGACAGCTGTTACCGGCGCTCTATCGCTTCAACATACGATTCCAA
AACAGCTCGGCGCTGCACTGGGCAGCGCGTTATGGTAAGCTGGAACTTAT
CCAGACGATGTGTGTTTACCGGGCCCGCGTCAATGTGTATCTCCATGGCT
ACACACCTCTTCATTTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAGA
TGGCTGCTCTCGTACGACGGCATCGATGTCAACTGCCGCGGCGAGGGTCT
GGGCTTGACCCCGCTTGGTGTGGCGGTGCGGAAGAAGGATGTAGAGGTTG
TTCAGGTGTTGCTTTCAGACGCCCGTACGGATATCAACGCAGGAAGCAGG
GACAACAAGACACCGCTGCTGGACGCTATCAAGCATCGGCACCTCGTCAT
TCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATGCATCCTCAGAGCC
AGTCAGCCTCGCCATTGCTGTACGCCATGCGCGCAGACTTCGGCAGCGGC
GGTCGCGCGCTCCTAGCGCATGGCGACATTGACATCTCAGCACGAGACCG
GAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCGCAACGACGACGGAC
TTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGAT
TGGCTTGGTATGACCGCCCTGCATCGTGCCATCATCAAAGACTATAGACA
GATCGCCGCCATGCTCCTGACGCGCAGTGATCTTGATGTCTCGATTTCCG
GTGCCGATGGGCACTGGAAGATATACGAAGAAATGCCGCCATTATGTCTG
GCCGTTGCCCTCCGTAGGGACCACATTTGCCAGCTTCTCCTGGAAGCTCC
TACGAATGCCGATGTTCGCACGGCAAGCGGGAATTCCCCCTTACATCTAG
CCGCAAGCATGGCGGATCTTGATTTGCTCACGCTATTGCTCAACCAACCA
GACATCAAGCTAAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATGA
AGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCGC
CAGGGGTGGATGCAAATGTGGGAGATACATGCGGGCAGACCGCACTCTGG
TGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGCGACTGCTATGCGA
AGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTTC
ATCATGCGGTCCAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTGC
GAGGAGAGACTGGATATCAATGTACCGGACATGACCGGTTGGACTCCACT
TGTGTGGGCCGTGCATCAAGCGGACATCGACATGGTCAGACTGTTGCTTG
CGAGAGACGATCTGCAGCTGGATCCAATCTTCGCGGGAAACGCATCGGCA
CTGGGCCTGGCAGCGGAACGAGGCCACACCAAGATTGTGAACTTATTCCT
CGAGCACCGGGATCGCTTGGACATTAATCTCCCAACCCAGGCAGGCGAGA
CCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGATGTCGTCGATCTC
CTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGACG
CAGTCCGCTGTGCTGGGCGGTGTATGCGGGACATTTCAACGTTGTGAGAC
GTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCGA
CCAGCACTGGCAGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATCT
TCTTGAGGCATATAGACTCGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001491KJC3_001491Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001491-T1.cdsKJC3_001491-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001491-T1.exon1KJC3_001491-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001491-T1KJC3_001491-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3942738..3944612 -
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