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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3966646..3968743- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001497-T1 ID=KJC3_001497-T1|Name=KJC3_001497-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2098bp|location=Sequence derived from alignment at ch1:3966646..3968743- (Aspergillus niger KJC3)
CAGTTCTCTCTCTACGCTTCTGATGCATTGGGAATATTCTCTGATCATTC
TCCTGGGGGCCTGCGCGGTCAGCGTGGACGGCTCTCCCCAGGTCGATCTG
GGCTATGCTCGCTACCGCGGGGTTCGACTGCCTGCCGGGGTGGATGAATA
TCTTGGGATGAGGTACGCAGCACCTCCCCTAGGCCAGCAAAGGTTCCGTG
CACCAGGGGATCCGAGCAGCACATCATCCATTCAGGATGCATTCGAGGTA
GGCGACCCTCCATCGCAATCCCATCGAGGCGCGTATTGACAGGCTGGGCG
GCGGCGTAGTTTGGGCCAACCTGCATCGGCGTCGGAGAGGAGATAAGCCC
GCTTGTGGGGGAAGACTGTCTGTTCATCAACGTGTTCACCCCCTCCCACG
CAACCACCCTCTCCAGACTGCCGGTGTGGGTGCACATTCAGGGCGGCGGT
TATGCATCCAACTCCAACGCCAACTTCAACGGGACGAACGTCATTCAACA
TTCGGGCTACGACCTCGTGTTCGTCAACTTCAACTACCGTGTCGGGGCCC
TGGGATTCCTGGCCAGCGAGGAGATCCGGCGGGATGGAGACCTGAACGTG
GGATTGCTAGACCAGCGAAAGGCCCTCGCATGGGTCAAGCAGCATATCAG
CCAGGTAGGTCACGGTCCGAACTGCTATAGCGCAGGCGCTGACCTGCTCG
GTTGTAGTTTGGGGGCGACCCGGACCACGTTATCGCTCATGGTGATTCCG
CCGGCGCGGGTTCGGTAACGCATCATATGACCGCGTATGGCGGCCGAGCG
GAGGGACTCTTTGCCGGTGCGGTGCTGGAGTCTCCATTCTGGCCCACACT
GCGCACGGTTGCCGAGATGGAATTCCAGTACACACGGTTTGTACAGCGCG
TCGGCTGCTCGGATGCATCGTCTGCCTTGGCGTGTCTTCAGTCTGCGGAC
CTGGCAGCGATACAGAAGGGCAACGTGGTGGACCCATTTCCAGACGCCGC
CGTGGATCCGCCCCCGCTGTGGTATTTTCTGCCCGTCATTGACGGTGCGG
TGGTGCAAGACCAGTTGTCTCGGCTCTTCGATCAGGGCAAGACCGTGAAA
ATTCCCGTGCTCGTTGGTGACGACACCAACGAGGGGTCGACCTTTGCTTA
TAATGCCAGCGACGCGTCTGACATGTCGCGGTTTCTCAACGCCAACTACC
CAGGGCTGTCATCTGCCAGCCTGGCCGCCATCGGTGATGCATATCCTCGC
ATGCGACCCGTGGCGGATCATGCAGCCTATTTCCCGTCCGCATCTGCCGC
CTATGGTGACGCTGCCTTTACGTGTCCGGGCAATCGCATCGCAGCGTCCA
TGGCAGATCACCTCCCGTCCGGCAGGGTTTGGAGCTACCGATACAACGTG
CGAGCCCCCGAGCTGGTCGATGAAGGCCTGGGTGTGCCGCATATCTTCGA
GCTGAGCGCCATTTTCGGAGTCGGCTTCGCCGGTAATAGCGAGATCACGA
GCTACAACGGGATCAACGCGAATGCGGTCGCCACCGTGATGGACTATTGG
ATCAGTTTCGTGAAGGCACTGGATCCAAACCCTCGCAGACGTAGCCAAGC
ACCGCGCTGGGAAGCGTGGAAGCCCGGCCTGGGGCAACGGCTCAAGATAC
AGACGAACACTACCGCGATGGAGCCAATCCCGCCGCAGCAAGCGGATCGA
TGTTCACTGTGGAGCGCACTGGCGCCGGAAATGGAGATTTAATCGATGGC
TACAAGCGGGTTTCCCGGCATGGTCCCTCTCGTTCCTGGTATGTTGTATG
TTGTATGTTGTATGTTGTATGTTGTATGTCACGGGGCGGTCCAGCGCTCC
AGCCCGCCCTTCAAGCTCGCACTTCGGCTCCCTCTACTCTGGCTTAGAAT
GATATGGACATGTTTAAAGTTTTGTATCGTTCCACGGCAACATACACTGG
TGTTAAGAGGCAGCCCTGACTAGGCTCCGAACTAGGAAATATTACAGACG
GTTACAGTAGTAAGACCCGGACCCGTGTCAGGGTTGCCTTGACTATGGTA
GGCCACATTGCAGGAGCTTGACTCGTCTATTGTTAAAGCGAATCCACA back to topCoding sequence (CDS) from alignment at ch1:3966646..3968743- >KJC3_001497-T1 ID=KJC3_001497-T1|Name=KJC3_001497-T1|organism=Aspergillus niger KJC3|type=CDS|length=4815bp|location=Sequence derived from alignment at ch1:3966646..3968743- (Aspergillus niger KJC3)
TTTGGGGGCGACCCGGACCACGTTATCGCTCATGGTGATTCCGCCGGCGC
GGGTTCGGTAACGCATCATATGACCGCGTATGGCGGCCGAGCGGAGGGAC
TCTTTGCCGGTGCGGTGCTGGAGTCTCCATTCTGGCCCACACTGCGCACG
GTTGCCGAGATGGAATTCCAGTACACACGGTTTGTACAGCGCGTCGGCTG
CTCGGATGCATCGTCTGCCTTGGCGTGTCTTCAGTCTGCGGACCTGGCAG
CGATACAGAAGGGCAACGTGGTGGACCCATTTCCAGACGCCGCCGTGGAT
CCGCCCCCGCTGTGGTATTTTCTGCCCGTCATTGACGGTGCGGTGGTGCA
AGACCAGTTGTCTCGGCTCTTCGATCAGGGCAAGACCGTGAAAATTCCCG
TGCTCGTTGGTGACGACACCAACGAGGGGTCGACCTTTGCTTATAATGCC
AGCGACGCGTCTGACATGTCGCGGTTTCTCAACGCCAACTACCCAGGGCT
GTCATCTGCCAGCCTGGCCGCCATCGGTGATGCATATCCTCGCATGCGAC
CCGTGGCGGATCATGCAGCCTATTTCCCGTCCGCATCTGCCGCCTATGGT
GACGCTGCCTTTACGTGTCCGGGCAATCGCATCGCAGCGTCCATGGCAGA
TCACCTCCCGTCCGGCAGGGTTTGGAGCTACCGATACAACGTGCGAGCCC
CCGAGCTGGTCGATGAAGGCCTGGGTGTGCCGCATATCTTCGAGCTGAGC
GCCATTTTCGGAGTCGGCTTCGCCGGTAATAGCGAGATCACGAGCTACAA
CGGGATCAACGCGAATGCGGTCGCCACCGTGATGGACTATTGGATCAGTT
TCGTGAAGGCACTGGATCCAAACCCTCGCAGACGTAGCCAAGCACCGCGC
TGGGAAGCGTGGAAGCCCGGCCTGGGGCAACGGCTCAAGATACAGACGAA
CACTACCGCGATGGAGCCAATCCCGCCGCAGCAAGCGGATCGATGTTCAC
TGTGGAGCGCACTGGCGCCGGAAATGGAGATTTAATTTGGGCCAACCTGC
ATCGGCGTCGGAGAGGAGATAAGCCCGCTTGTGGGGGAAGACTGTCTGTT
CATCAACGTGTTCACCCCCTCCCACGCAACCACCCTCTCCAGACTGCCGG
TGTGGGTGCACATTCAGGGCGGCGGTTATGCATCCAACTCCAACGCCAAC
TTCAACGGGACGAACGTCATTCAACATTCGGGCTACGACCTCGTGTTCGT
CAACTTCAACTACCGTGTCGGGGCCCTGGGATTCCTGGCCAGCGAGGAGA
TCCGGCGGGATGGAGACCTGAACGTGGGATTGCTAGACCAGCGAAAGGCC
CTCGCATGGGTCAAGCAGCATATCAGCCAGATGCATTGGGAATATTCTCT
GATCATTCTCCTGGGGGCCTGCGCGGTCAGCGTGGACGGCTCTCCCCAGG
TCGATCTGGGCTATGCTCGCTACCGCGGGGTTCGACTGCCTGCCGGGGTG
GATGAATATCTTGGGATGAGGTACGCAGCACCTCCCCTAGGCCAGCAAAG
GTTCCGTGCACCAGGGGATCCGAGCAGCACATCATCCATTCAGGATGCAT
TCGAGTTTGGGGGCGACCCGGACCACGTTATCGCTCATGGTGATTCCGCC
GGCGCGGGTTCGGTAACGCATCATATGACCGCGTATGGCGGCCGAGCGGA
GGGACTCTTTGCCGGTGCGGTGCTGGAGTCTCCATTCTGGCCCACACTGC
GCACGGTTGCCGAGATGGAATTCCAGTACACACGGTTTGTACAGCGCGTC
GGCTGCTCGGATGCATCGTCTGCCTTGGCGTGTCTTCAGTCTGCGGACCT
GGCAGCGATACAGAAGGGCAACGTGGTGGACCCATTTCCAGACGCCGCCG
TGGATCCGCCCCCGCTGTGGTATTTTCTGCCCGTCATTGACGGTGCGGTG
GTGCAAGACCAGTTGTCTCGGCTCTTCGATCAGGGCAAGACCGTGAAAAT
TCCCGTGCTCGTTGGTGACGACACCAACGAGGGGTCGACCTTTGCTTATA
ATGCCAGCGACGCGTCTGACATGTCGCGGTTTCTCAACGCCAACTACCCA
GGGCTGTCATCTGCCAGCCTGGCCGCCATCGGTGATGCATATCCTCGCAT
GCGACCCGTGGCGGATCATGCAGCCTATTTCCCGTCCGCATCTGCCGCCT
ATGGTGACGCTGCCTTTACGTGTCCGGGCAATCGCATCGCAGCGTCCATG
GCAGATCACCTCCCGTCCGGCAGGGTTTGGAGCTACCGATACAACGTGCG
AGCCCCCGAGCTGGTCGATGAAGGCCTGGGTGTGCCGCATATCTTCGAGC
TGAGCGCCATTTTCGGAGTCGGCTTCGCCGGTAATAGCGAGATCACGAGC
TACAACGGGATCAACGCGAATGCGGTCGCCACCGTGATGGACTATTGGAT
CAGTTTCGTGAAGGCACTGGATCCAAACCCTCGCAGACGTAGCCAAGCAC
CGCGCTGGGAAGCGTGGAAGCCCGGCCTGGGGCAACGGCTCAAGATACAG
ACGAACACTACCGCGATGGAGCCAATCCCGCCGCAGCAAGCGGATCGATG
TTCACTGTGGAGCGCACTGGCGCCGGAAATGGAGATTTAATTTGGGCCAA
CCTGCATCGGCGTCGGAGAGGAGATAAGCCCGCTTGTGGGGGAAGACTGT
CTGTTCATCAACGTGTTCACCCCCTCCCACGCAACCACCCTCTCCAGACT
GCCGGTGTGGGTGCACATTCAGGGCGGCGGTTATGCATCCAACTCCAACG
CCAACTTCAACGGGACGAACGTCATTCAACATTCGGGCTACGACCTCGTG
TTCGTCAACTTCAACTACCGTGTCGGGGCCCTGGGATTCCTGGCCAGCGA
GGAGATCCGGCGGGATGGAGACCTGAACGTGGGATTGCTAGACCAGCGAA
AGGCCCTCGCATGGGTCAAGCAGCATATCAGCCAGATGCATTGGGAATAT
TCTCTGATCATTCTCCTGGGGGCCTGCGCGGTCAGCGTGGACGGCTCTCC
CCAGGTCGATCTGGGCTATGCTCGCTACCGCGGGGTTCGACTGCCTGCCG
GGGTGGATGAATATCTTGGGATGAGGTACGCAGCACCTCCCCTAGGCCAG
CAAAGGTTCCGTGCACCAGGGGATCCGAGCAGCACATCATCCATTCAGGA
TGCATTCGAGTTTGGGGGCGACCCGGACCACGTTATCGCTCATGGTGATT
CCGCCGGCGCGGGTTCGGTAACGCATCATATGACCGCGTATGGCGGCCGA
GCGGAGGGACTCTTTGCCGGTGCGGTGCTGGAGTCTCCATTCTGGCCCAC
ACTGCGCACGGTTGCCGAGATGGAATTCCAGTACACACGGTTTGTACAGC
GCGTCGGCTGCTCGGATGCATCGTCTGCCTTGGCGTGTCTTCAGTCTGCG
GACCTGGCAGCGATACAGAAGGGCAACGTGGTGGACCCATTTCCAGACGC
CGCCGTGGATCCGCCCCCGCTGTGGTATTTTCTGCCCGTCATTGACGGTG
CGGTGGTGCAAGACCAGTTGTCTCGGCTCTTCGATCAGGGCAAGACCGTG
AAAATTCCCGTGCTCGTTGGTGACGACACCAACGAGGGGTCGACCTTTGC
TTATAATGCCAGCGACGCGTCTGACATGTCGCGGTTTCTCAACGCCAACT
ACCCAGGGCTGTCATCTGCCAGCCTGGCCGCCATCGGTGATGCATATCCT
CGCATGCGACCCGTGGCGGATCATGCAGCCTATTTCCCGTCCGCATCTGC
CGCCTATGGTGACGCTGCCTTTACGTGTCCGGGCAATCGCATCGCAGCGT
CCATGGCAGATCACCTCCCGTCCGGCAGGGTTTGGAGCTACCGATACAAC
GTGCGAGCCCCCGAGCTGGTCGATGAAGGCCTGGGTGTGCCGCATATCTT
CGAGCTGAGCGCCATTTTCGGAGTCGGCTTCGCCGGTAATAGCGAGATCA
CGAGCTACAACGGGATCAACGCGAATGCGGTCGCCACCGTGATGGACTAT
TGGATCAGTTTCGTGAAGGCACTGGATCCAAACCCTCGCAGACGTAGCCA
AGCACCGCGCTGGGAAGCGTGGAAGCCCGGCCTGGGGCAACGGCTCAAGA
TACAGACGAACACTACCGCGATGGAGCCAATCCCGCCGCAGCAAGCGGAT
CGATGTTCACTGTGGAGCGCACTGGCGCCGGAAATGGAGATTTAATTTGG
GCCAACCTGCATCGGCGTCGGAGAGGAGATAAGCCCGCTTGTGGGGGAAG
ACTGTCTGTTCATCAACGTGTTCACCCCCTCCCACGCAACCACCCTCTCC
AGACTGCCGGTGTGGGTGCACATTCAGGGCGGCGGTTATGCATCCAACTC
CAACGCCAACTTCAACGGGACGAACGTCATTCAACATTCGGGCTACGACC
TCGTGTTCGTCAACTTCAACTACCGTGTCGGGGCCCTGGGATTCCTGGCC
AGCGAGGAGATCCGGCGGGATGGAGACCTGAACGTGGGATTGCTAGACCA
GCGAAAGGCCCTCGCATGGGTCAAGCAGCATATCAGCCAGATGCATTGGG
AATATTCTCTGATCATTCTCCTGGGGGCCTGCGCGGTCAGCGTGGACGGC
TCTCCCCAGGTCGATCTGGGCTATGCTCGCTACCGCGGGGTTCGACTGCC
TGCCGGGGTGGATGAATATCTTGGGATGAGGTACGCAGCACCTCCCCTAG
GCCAGCAAAGGTTCCGTGCACCAGGGGATCCGAGCAGCACATCATCCATT
CAGGATGCATTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001497-T1.utr3p1 | KJC3_001497-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001497-T1.utr5p1 | KJC3_001497-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | MEROPS:MER0033188 |
| DBxref | InterPro:IPR019819 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR002018 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3966646..3968743 - |
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