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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3995950..3997410- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001507-T1 ID=KJC3_001507-T1|Name=KJC3_001507-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1461bp|location=Sequence derived from alignment at ch1:3995950..3997410- (Aspergillus niger KJC3)
AAACACTTAGACTCAACTCAATATGGAGGGAGATGGTTATAGTTTCCTCG
AAGGAGTATCATCGCCATCTGAAAAATCCATCAAAGATTTAAGGACTGCT
CAAAATGGGGAAAGACCAACGTTAATCGGAAACTTCACAATATGGCGAAA
TCCCGATTCAAAATTCTCCACTTTAGTCCGCGACCACATGCATCGAGGAG
TTTCAGTATGTTATCCTCTTTTGCATGTTGTATTACATCTGTACAGAGTA
CTGAGTATTTCTAGTCCCTGCTTTTCTATTTGGGAAAGGAGCAAAATAAA
CATTACATAGAGCCGAGAATTGTCCGTTACGACGGTGAGAGCACTCAGCC
GCAGACCTTTGTCATTGGTACTCCCAGTGACAAGAAATCTCGGCTTGTTG
TCCTATTTCGACCACTCGCTGAAGAGCTCTGTAGTGGGAATGGATTCTTT
GAAATATGCTCTGGCTCCTTTGCTTGGGATGAACATCGGGTATATGATTG
GTTCCAGCCGGATACAGATCGGTCTGGGTCAAGGTGGGAACCAATTTCAG
TCGGCTATAATCGGGTTTTGATTATCCAGGCAGGCACACTGGTTCGATTT
AGCCCGGGTAAACGCCCGTGTGATTTCGTATGCATGGGCTACTCCGACAG
CCAGGCAAACCTTACGCGAAGCGACATTGAGTTTGAATCATTGGTTGCCC
CGTTCTTACGACGTATCCCTGAACATAAGAGACTCCAGATACGTTGCAAT
CCTGTACTACCGGTCCAGGATCAGGGATACCAGAGCCTTAGAACAATGGA
GCACAGCAGTGATCCACATCGCTCTAATCCAAACACGGAGTTAAACCCAC
CTTTCCGGAAAGACTGGAACACGATTACGCAGGTTATCAATACCCTGCGC
AATGAGGAACAACAAATGATTCGTTTCCTTAATGGCGATCGATTCGAGGA
CATCTTTGCAAGCAACCCGCCGAGTAAAATCTCCAGAAAAACCCCTAAGT
CTGAGAAGCTTCGTTATTTGCTGGATGTCCAAGCGAAGACCTGGCAGTAT
TTCAAGGATTACCCAGATTTTGATACCAGAAAAGACAATAATAAATTCTG
GGAAAATATCTATCGCGAAGGCTTCCGTGGTGGAATGCAGAGTGCCTTTG
CGTCTAAATACCGCTATGACGAGGAGAGTACACGAGCGATACTAAATCGG
GGTGGAAAGATCCAGGCTCTCGCAAGCGAGCTTGCGGAGCCTGGAGTAGC
TCCATTTCTTCTTCCGGTTGTTGATCGCCTTGGTGAGATTTCATACCCCA
GTATTAAAAGACTGAGCGACGAGATAAGGCATCAATGTCCTGAAACATTG
CATGCAAGTTCATTGATACGTGGAAAATGGGAGATGTATGCAAAGAATTA
TCAGATGTTCATAACTTCTATTGAGACGGGCATTTCTTCCGATTCCTCTA
CCTGTATGTGA back to topCoding sequence (CDS) from alignment at ch1:3995950..3997410- >KJC3_001507-T1 ID=KJC3_001507-T1|Name=KJC3_001507-T1|organism=Aspergillus niger KJC3|type=CDS|length=2760bp|location=Sequence derived from alignment at ch1:3995950..3997410- (Aspergillus niger KJC3)
TCCCTGCTTTTCTATTTGGGAAAGGAGCAAAATAAACATTACATAGAGCC
GAGAATTGTCCGTTACGACGGTGAGAGCACTCAGCCGCAGACCTTTGTCA
TTGGTACTCCCAGTGACAAGAAATCTCGGCTTGTTGTCCTATTTCGACCA
CTCGCTGAAGAGCTCTGTAGTGGGAATGGATTCTTTGAAATATGCTCTGG
CTCCTTTGCTTGGGATGAACATCGGGTATATGATTGGTTCCAGCCGGATA
CAGATCGGTCTGGGTCAAGGTGGGAACCAATTTCAGTCGGCTATAATCGG
GTTTTGATTATCCAGGCAGGCACACTGGTTCGATTTAGCCCGGGTAAACG
CCCGTGTGATTTCGTATGCATGGGCTACTCCGACAGCCAGGCAAACCTTA
CGCGAAGCGACATTGAGTTTGAATCATTGGTTGCCCCGTTCTTACGACGT
ATCCCTGAACATAAGAGACTCCAGATACGTTGCAATCCTGTACTACCGGT
CCAGGATCAGGGATACCAGAGCCTTAGAACAATGGAGCACAGCAGTGATC
CACATCGCTCTAATCCAAACACGGAGTTAAACCCACCTTTCCGGAAAGAC
TGGAACACGATTACGCAGGTTATCAATACCCTGCGCAATGAGGAACAACA
AATGATTCGTTTCCTTAATGGCGATCGATTCGAGGACATCTTTGCAAGCA
ACCCGCCGAGTAAAATCTCCAGAAAAACCCCTAAGTCTGAGAAGCTTCGT
TATTTGCTGGATGTCCAAGCGAAGACCTGGCAGTATTTCAAGGATTACCC
AGATTTTGATACCAGAAAAGACAATAATAAATTCTGGGAAAATATCTATC
GCGAAGGCTTCCGTGGTGGAATGCAGAGTGCCTTTGCGTCTAAATACCGC
TATGACGAGGAGAGTACACGAGCGATACTAAATCGGGGTGGAAAGATCCA
GGCTCTCGCAAGCGAGCTTGCGGAGCCTGGAGTAGCTCCATTTCTTCTTC
CGGTTGTTGATCGCCTTGGTGAGATTTCATACCCCAGTATTAAAAGACTG
AGCGACGAGATAAGGCATCAATGTCCTGAAACATTGCATGCAAGTTCATT
GATACGTGGAAAATGGGAGATGTATGCAAAGAATTATCAGATGTTCATAA
CTTCTATTGAGACGGGCATTTCTTCCGATTCCTCTACCTGTATGTGAATG
GAGGGAGATGGTTATAGTTTCCTCGAAGGAGTATCATCGCCATCTGAAAA
ATCCATCAAAGATTTAAGGACTGCTCAAAATGGGGAAAGACCAACGTTAA
TCGGAAACTTCACAATATGGCGAAATCCCGATTCAAAATTCTCCACTTTA
GTCCGCGACCACATGCATCGAGGAGTTTCATCCCTGCTTTTCTATTTGGG
AAAGGAGCAAAATAAACATTACATAGAGCCGAGAATTGTCCGTTACGACG
GTGAGAGCACTCAGCCGCAGACCTTTGTCATTGGTACTCCCAGTGACAAG
AAATCTCGGCTTGTTGTCCTATTTCGACCACTCGCTGAAGAGCTCTGTAG
TGGGAATGGATTCTTTGAAATATGCTCTGGCTCCTTTGCTTGGGATGAAC
ATCGGGTATATGATTGGTTCCAGCCGGATACAGATCGGTCTGGGTCAAGG
TGGGAACCAATTTCAGTCGGCTATAATCGGGTTTTGATTATCCAGGCAGG
CACACTGGTTCGATTTAGCCCGGGTAAACGCCCGTGTGATTTCGTATGCA
TGGGCTACTCCGACAGCCAGGCAAACCTTACGCGAAGCGACATTGAGTTT
GAATCATTGGTTGCCCCGTTCTTACGACGTATCCCTGAACATAAGAGACT
CCAGATACGTTGCAATCCTGTACTACCGGTCCAGGATCAGGGATACCAGA
GCCTTAGAACAATGGAGCACAGCAGTGATCCACATCGCTCTAATCCAAAC
ACGGAGTTAAACCCACCTTTCCGGAAAGACTGGAACACGATTACGCAGGT
TATCAATACCCTGCGCAATGAGGAACAACAAATGATTCGTTTCCTTAATG
GCGATCGATTCGAGGACATCTTTGCAAGCAACCCGCCGAGTAAAATCTCC
AGAAAAACCCCTAAGTCTGAGAAGCTTCGTTATTTGCTGGATGTCCAAGC
GAAGACCTGGCAGTATTTCAAGGATTACCCAGATTTTGATACCAGAAAAG
ACAATAATAAATTCTGGGAAAATATCTATCGCGAAGGCTTCCGTGGTGGA
ATGCAGAGTGCCTTTGCGTCTAAATACCGCTATGACGAGGAGAGTACACG
AGCGATACTAAATCGGGGTGGAAAGATCCAGGCTCTCGCAAGCGAGCTTG
CGGAGCCTGGAGTAGCTCCATTTCTTCTTCCGGTTGTTGATCGCCTTGGT
GAGATTTCATACCCCAGTATTAAAAGACTGAGCGACGAGATAAGGCATCA
ATGTCCTGAAACATTGCATGCAAGTTCATTGATACGTGGAAAATGGGAGA
TGTATGCAAAGAATTATCAGATGTTCATAACTTCTATTGAGACGGGCATT
TCTTCCGATTCCTCTACCTGTATGTGAATGGAGGGAGATGGTTATAGTTT
CCTCGAAGGAGTATCATCGCCATCTGAAAAATCCATCAAAGATTTAAGGA
CTGCTCAAAATGGGGAAAGACCAACGTTAATCGGAAACTTCACAATATGG
CGAAATCCCGATTCAAAATTCTCCACTTTAGTCCGCGACCACATGCATCG
AGGAGTTTCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001507-T1.utr5p1 | KJC3_001507-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3995950..3997410 - |
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