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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:4077325..4078756- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001525-T1 ID=KJC3_001525-T1|Name=KJC3_001525-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1432bp|location=Sequence derived from alignment at ch1:4077325..4078756- (Aspergillus niger KJC3)
ACCACACCTTCCAAGATATATGGTAGAACCTCTAACATATTTATCTCTTT
GACGTCTTACCTATCAGTTTCAATCCCCTCTTCCAGGCCGAACGAATCAA
TATGGCGGATGCTCTCTCCGTGGCCTCCAGCTTGATCGCGCTTGCGACTT
TCGCCTTTGAAGCGAGCAAATCGCTCTATACTCTAGTCGAGGGCTTCAAA
AACACGCAGCGAACAGTTCGTGAGCTACGGTATGAATTGGAATCTTTAAC
ACAGGTCCTCGGCACCTTAATCTCGGCAGTAAAGGACAATGAAGCCGAGC
TGGCCAGCTTGAAGTTACCTCTTCTGCGATGTGGGAAAATATGCAGCGAG
TTCAGAGAGATTATTCGCAAATGTGTGGCCCATTCTAACGGCCAACGCAC
AAGCTTTCGTGACTGGGCTAAATTACAGTACATGGGTGGGAATATTAATG
ATCTGAAAACAACGCTTGCTGGTTATAAAGCAACTATCTCTATCGCTCTC
GGGGGCGCCACATTGTAAGATATATGGGTCCTACAATGACTATGAGACAC
TGACTCTGACTCATTATACTCAGTCGTCAAGCCACTGTTGCCAGCACTGT
CATCGACCAGTATAAGACCATGATCGAGGAAGCAACGTCTGACCTTCAGG
AGCATCTACAAAACATTGAGGAAAGGTTGCAATCGCTCGATCAGCACGGG
GGTCCTGTTCAAAGGTCTGATACCTTTCACTTACAAGACATAAGGGAGGA
GAAGGAAAGCACTGAGCAATGCCTGACAATATGTACTCATGTTGCGCAAG
TCATTGCACACTTCCAGCAACAGCTTCCGCAATTCCATTCTAAGGGTGAG
AATATATCTATACAGTTTGGTTCTGGCAATGATGATATATCCGGTCAATC
CCAGAACCTGACCAGCGCTATGCTCACTGACTTTGGCGCAAGAGTCTCAT
CAAACTCGGAGGCACTCCAGGCCCGTTTGATGGAACTGACAAACCGACTG
AGACAAATGTCGGAACAGGGCATAATGTATAAGGATCCCACAAACTTGAA
TCTCATCAAAGAGGAGAGGGAAAGCATTATCCAATGTCTTAATGTCTGTT
CAGAGGCCTCCGACTTGGCACACAGAGCCCGCACGAATATCTTTGAGGAC
GTGACATCTTCAGATGAGTCACATCAGCTCGTGGTATCTACCATTGGAGA
TCTGATTTCCGCCAAGCATATCATCACTGGCTCGAAATCGGCGCAGTGGT
TGGGCCAAATGTCAGACACTTCGCTACAGCAATTATCTCGGGACTTCCGT
GGACAAGTCGGGATAGGAGAAGAGCCACCCGCGCGGGCAGAGAAAAATGA
ATTCAATACCCGCTACGGGTCTGGTCAGTTGCTCGGAGAAGACTCTCCAA
GGCGCCGAACATCTCCCAGCGACAAACGCTAA back to topCoding sequence (CDS) from alignment at ch1:4077325..4078756- >KJC3_001525-T1 ID=KJC3_001525-T1|Name=KJC3_001525-T1|organism=Aspergillus niger KJC3|type=CDS|length=2544bp|location=Sequence derived from alignment at ch1:4077325..4078756- (Aspergillus niger KJC3)
TCGTCAAGCCACTGTTGCCAGCACTGTCATCGACCAGTATAAGACCATGA
TCGAGGAAGCAACGTCTGACCTTCAGGAGCATCTACAAAACATTGAGGAA
AGGTTGCAATCGCTCGATCAGCACGGGGGTCCTGTTCAAAGGTCTGATAC
CTTTCACTTACAAGACATAAGGGAGGAGAAGGAAAGCACTGAGCAATGCC
TGACAATATGTACTCATGTTGCGCAAGTCATTGCACACTTCCAGCAACAG
CTTCCGCAATTCCATTCTAAGGGTGAGAATATATCTATACAGTTTGGTTC
TGGCAATGATGATATATCCGGTCAATCCCAGAACCTGACCAGCGCTATGC
TCACTGACTTTGGCGCAAGAGTCTCATCAAACTCGGAGGCACTCCAGGCC
CGTTTGATGGAACTGACAAACCGACTGAGACAAATGTCGGAACAGGGCAT
AATGTATAAGGATCCCACAAACTTGAATCTCATCAAAGAGGAGAGGGAAA
GCATTATCCAATGTCTTAATGTCTGTTCAGAGGCCTCCGACTTGGCACAC
AGAGCCCGCACGAATATCTTTGAGGACGTGACATCTTCAGATGAGTCACA
TCAGCTCGTGGTATCTACCATTGGAGATCTGATTTCCGCCAAGCATATCA
TCACTGGCTCGAAATCGGCGCAGTGGTTGGGCCAAATGTCAGACACTTCG
CTACAGCAATTATCTCGGGACTTCCGTGGACAAGTCGGGATAGGAGAAGA
GCCACCCGCGCGGGCAGAGAAAAATGAATTCAATACCCGCTACGGGTCTG
GTCAGTTGCTCGGAGAAGACTCTCCAAGGCGCCGAACATCTCCCAGCGAC
AAACGCTAAATGGCGGATGCTCTCTCCGTGGCCTCCAGCTTGATCGCGCT
TGCGACTTTCGCCTTTGAAGCGAGCAAATCGCTCTATACTCTAGTCGAGG
GCTTCAAAAACACGCAGCGAACAGTTCGTGAGCTACGGTATGAATTGGAA
TCTTTAACACAGGTCCTCGGCACCTTAATCTCGGCAGTAAAGGACAATGA
AGCCGAGCTGGCCAGCTTGAAGTTACCTCTTCTGCGATGTGGGAAAATAT
GCAGCGAGTTCAGAGAGATTATTCGCAAATGTGTGGCCCATTCTAACGGC
CAACGCACAAGCTTTCGTGACTGGGCTAAATTACAGTACATGGGTGGGAA
TATTAATGATCTGAAAACAACGCTTGCTGGTTATAAAGCAACTATCTCTA
TCGCTCTCGGGGGCGCCACATTTCGTCAAGCCACTGTTGCCAGCACTGTC
ATCGACCAGTATAAGACCATGATCGAGGAAGCAACGTCTGACCTTCAGGA
GCATCTACAAAACATTGAGGAAAGGTTGCAATCGCTCGATCAGCACGGGG
GTCCTGTTCAAAGGTCTGATACCTTTCACTTACAAGACATAAGGGAGGAG
AAGGAAAGCACTGAGCAATGCCTGACAATATGTACTCATGTTGCGCAAGT
CATTGCACACTTCCAGCAACAGCTTCCGCAATTCCATTCTAAGGGTGAGA
ATATATCTATACAGTTTGGTTCTGGCAATGATGATATATCCGGTCAATCC
CAGAACCTGACCAGCGCTATGCTCACTGACTTTGGCGCAAGAGTCTCATC
AAACTCGGAGGCACTCCAGGCCCGTTTGATGGAACTGACAAACCGACTGA
GACAAATGTCGGAACAGGGCATAATGTATAAGGATCCCACAAACTTGAAT
CTCATCAAAGAGGAGAGGGAAAGCATTATCCAATGTCTTAATGTCTGTTC
AGAGGCCTCCGACTTGGCACACAGAGCCCGCACGAATATCTTTGAGGACG
TGACATCTTCAGATGAGTCACATCAGCTCGTGGTATCTACCATTGGAGAT
CTGATTTCCGCCAAGCATATCATCACTGGCTCGAAATCGGCGCAGTGGTT
GGGCCAAATGTCAGACACTTCGCTACAGCAATTATCTCGGGACTTCCGTG
GACAAGTCGGGATAGGAGAAGAGCCACCCGCGCGGGCAGAGAAAAATGAA
TTCAATACCCGCTACGGGTCTGGTCAGTTGCTCGGAGAAGACTCTCCAAG
GCGCCGAACATCTCCCAGCGACAAACGCTAAATGGCGGATGCTCTCTCCG
TGGCCTCCAGCTTGATCGCGCTTGCGACTTTCGCCTTTGAAGCGAGCAAA
TCGCTCTATACTCTAGTCGAGGGCTTCAAAAACACGCAGCGAACAGTTCG
TGAGCTACGGTATGAATTGGAATCTTTAACACAGGTCCTCGGCACCTTAA
TCTCGGCAGTAAAGGACAATGAAGCCGAGCTGGCCAGCTTGAAGTTACCT
CTTCTGCGATGTGGGAAAATATGCAGCGAGTTCAGAGAGATTATTCGCAA
ATGTGTGGCCCATTCTAACGGCCAACGCACAAGCTTTCGTGACTGGGCTA
AATTACAGTACATGGGTGGGAATATTAATGATCTGAAAACAACGCTTGCT
GGTTATAAAGCAACTATCTCTATCGCTCTCGGGGGCGCCACATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001525-T1.utr5p1 | KJC3_001525-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031348 |
| DBxref | PFAM:PF17111 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:4077325..4078756 - |
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