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KJC3_001537-T1, KJC3_001537-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001537-T1
Unique NameKJC3_001537-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:4121060..4123723-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001537-T1 ID=KJC3_001537-T1|Name=KJC3_001537-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2664bp|location=Sequence derived from alignment at ch1:4121060..4123723- (Aspergillus niger KJC3)
ATGGGAATTATATAATGGCACCAATTTCAGTGTTTATCAATCATTTGGAT
CAATATCAATAATTACAAACCTTTCAGAGGAATCAAATCCAGGTTATTCT
AGACGGCTTTCAGCAAAGTCTATACCTCAAAAATGTCTACCCCCACCGCG
AAATTGATCAAGTCCGGCGACATCTGGCAGATCGAAGGGTACTATGCCTA
CCGCAACAAAGTCAGAAGAGGAGAGTCAACTAACATGATCAGTCGTCCCC
GTGAGAACTTCCGAGTTCTCAATGTCTTCCACCCGCCCAACATCCCCGGC
AAATCCATGGTCGTCGGAGTGATCGACATGGATCCCAACGGCGCAACACC
CTCACACACCCACGGAGGCGCTGCAGTGGTGGCCATGGTGGCCTCAGGAA
CCGTCCTCAACCAAATGAATTGCGAGGAGCCGATTGTTTCCAAGGCAGGG
GATATCTGGTACGAGGCTCCCGGATGTCACCATGTTCGGTCTGAGAACGC
TGGGGGTGGGTCAGAGACGGCGCGGTTTTTCGCCGTGTTGATAGTGGACG
ATGAAGTGATCAGGGATGGGGTGCATAATATCTTTGTACTGGATGTTGAA
AAAGCAGAGAAAGAGAGCGCACAGTAAATAGTTACTCCACAGCAGTCAGT
GGATAATTTTAAATGTGAATGTTGATTGGCGCGATGCTGTTGGGAGGCTG
ACGTCAGCAGCCTGACACTCCTCAATCGAATTCCTCCCCTCTTTGGCTCC
GTCTTCATTCTCACTGTCTTCGAACATAAGACACACACATGCACTTCCTA
CAACAACATGAACGTGCTCGAACTCGACCTGGCGGGCTCATTCCACCAGT
CCAAACCAGCCCGTCGTGTCGGCCTGGCATGTGCGCCCTGTCGCAAAAAA
CACCTCAGCTGCGACGCGAGAACCCCCGTATGTGCCCGCTGCATCGCTGA
CAATAAGCAATGCGTCTATGAGAAGTCGCGTCGAGGCGGACGCCGTCGCA
AGCCGTCAGAGTCAGCATCAGGATTGGGATCCGGTGGGAATTCAACAGCA
TCGTCTGCACTTCTGACTCCGGGTCTCCCTGCCGATCAATTGTGGGTCCC
GTCATCGTCACCGGAGTCTGTCATGGTGCCAGCAGTTCAGGCACAGGCCA
GGAGCACAACAAGTGGCTCGATGACACATCCTGCACTCTCTGCAACGGCT
GAAAATGATGCCTTAAGAACAGATCGGCTGTATAACCTTTACTACACTTT
TTTCCATCCCGCGCATCCATGCGTTTTACCATGGCGGTTCCTCAGCCAGC
GCCTCGAGACAGAGCGCGAGACAATACAACCGCTCCTTTATGTGATGCAG
TATATCGGGGCACACTATGCAGATGACGTTGATGCGTCGCCACTGGCGAC
AATCTCCGAGTCACGATTAGCTCCTATACGCAGCAAACAAGCCGCTGCGA
CCGGGTTCGACGTGCAGGCCATGATCCTCTACTCGATTGCAGTGTACTGG
TGCGATGAAATAGACCGGGGTGTTAATTTACTCAAAGAAGCCATTCAAAT
GGCCTTGAATATACAGATGAACAAGAAAGATTATGCTACACATTCTGGCC
AGAATGACCCGATGCTAGAAGAAAGCTGGCGTCGCACCTGGTGGCTTGTA
TACATCACGGATGCCCACGTGGCTGGTAGCACCCATGTCTACCCATTTCG
CACGAGCAATATAGACATGAGTGTCGATCTTCCATGCGAAGAGGAAGACT
ATGAAGCTGGGGTAATTTGCCCTCCGACAACCCTCGAAGTATACGACATC
CGGGAATTTCTCCCAGAAGCAGACCGACCCAGCTTCTCCTCTTACGCAGA
GCTCATTGGCTTAACCCGTTCAATAGACAAAGCCTTAGCATCCGACTGGT
CCAAAAACGCCGCCCTGGTCCACACAATTTGCGAGAATGCCGACATCAGC
GTCGCGGCCTGGCACTCGCTACTTCCACCCTGCAAGCGAGACCCGCTACG
CAGCGACGGCACCGTCGATGAAATCATGTTCAAAGCCAAGTTCATCCTCC
ACGCATACGCTATAGAGATACATCGTCCATTATCAACCTTGGCGTACAGT
TCCGTCGAGTCGACCTGCAAATGCGCACCCCCGGTACCAGCTGAAGACGC
CCCAGGATCAGACACCACTCAAATCCAGCTCCACACACTCAAATGTTTGC
ACGCGATAGAACAACTCGGGCGGCTCATGATACTCCCCGCTAATATCCAC
GCTCATACCCCATTCATCATCTGCATGATTGCCAACGCCACCATTGCCCA
TTTAGCCGCCTGTCGGTACGTATTTGCCGGGCCGGACCTCCAGCTTGGTC
GTGAGAGAATCCGTCTCAGTATGGGTACTTTAAAGAGGCTGAGTGAACAT
TGGGGGCAGGGAAAGAGAATTTATCGAGAGATGGGGATTGTTGCGAGGGA
GATCCTGTCCCTTGCGGATCGGGAGAAGGGTAGTCATGATCGAGTTGGAT
TCTCTACGAAAGGTACATTATCAGGCATGCCGAATACACCTGCTGCACTG
GAGTTTTCGTCATTCGACATGCATAATATGAACGTGGCAGAGTTCGATTT
CTGTGGGTATTTCGATGGGGCTATTGGTGAGGTAGTTGAGCCTGCTTCAT
TTCTGGTTGTCTGA
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Coding sequence (CDS) from alignment at ch1:4121060..4123723-

>KJC3_001537-T1 ID=KJC3_001537-T1|Name=KJC3_001537-T1|organism=Aspergillus niger KJC3|type=CDS|length=4890bp|location=Sequence derived from alignment at ch1:4121060..4123723- (Aspergillus niger KJC3)
CCTGACACTCCTCAATCGAATTCCTCCCCTCTTTGGCTCCGTCTTCATTC
TCACTGTCTTCGAACATAAGACACACACATGCACTTCCTACAACAACATG
AACGTGCTCGAACTCGACCTGGCGGGCTCATTCCACCAGTCCAAACCAGC
CCGTCGTGTCGGCCTGGCATGTGCGCCCTGTCGCAAAAAACACCTCAGCT
GCGACGCGAGAACCCCCGTATGTGCCCGCTGCATCGCTGACAATAAGCAA
TGCGTCTATGAGAAGTCGCGTCGAGGCGGACGCCGTCGCAAGCCGTCAGA
GTCAGCATCAGGATTGGGATCCGGTGGGAATTCAACAGCATCGTCTGCAC
TTCTGACTCCGGGTCTCCCTGCCGATCAATTGTGGGTCCCGTCATCGTCA
CCGGAGTCTGTCATGGTGCCAGCAGTTCAGGCACAGGCCAGGAGCACAAC
AAGTGGCTCGATGACACATCCTGCACTCTCTGCAACGGCTGAAAATGATG
CCTTAAGAACAGATCGGCTGTATAACCTTTACTACACTTTTTTCCATCCC
GCGCATCCATGCGTTTTACCATGGCGGTTCCTCAGCCAGCGCCTCGAGAC
AGAGCGCGAGACAATACAACCGCTCCTTTATGTGATGCAGTATATCGGGG
CACACTATGCAGATGACGTTGATGCGTCGCCACTGGCGACAATCTCCGAG
TCACGATTAGCTCCTATACGCAGCAAACAAGCCGCTGCGACCGGGTTCGA
CGTGCAGGCCATGATCCTCTACTCGATTGCAGTGTACTGGTGCGATGAAA
TAGACCGGGGTGTTAATTTACTCAAAGAAGCCATTCAAATGGCCTTGAAT
ATACAGATGAACAAGAAAGATTATGCTACACATTCTGGCCAGAATGACCC
GATGCTAGAAGAAAGCTGGCGTCGCACCTGGTGGCTTGTATACATCACGG
ATGCCCACGTGGCTGGTAGCACCCATGTCTACCCATTTCGCACGAGCAAT
ATAGACATGAGTGTCGATCTTCCATGCGAAGAGGAAGACTATGAAGCTGG
GGTAATTTGCCCTCCGACAACCCTCGAAGTATACGACATCCGGGAATTTC
TCCCAGAAGCAGACCGACCCAGCTTCTCCTCTTACGCAGAGCTCATTGGC
TTAACCCGTTCAATAGACAAAGCCTTAGCATCCGACTGGTCCAAAAACGC
CGCCCTGGTCCACACAATTTGCGAGAATGCCGACATCAGCGTCGCGGCCT
GGCACTCGCTACTTCCACCCTGCAAGCGAGACCCGCTACGCAGCGACGGC
ACCGTCGATGAAATCATGTTCAAAGCCAAGTTCATCCTCCACGCATACGC
TATAGAGATACATCGTCCATTATCAACCTTGGCGTACAGTTCCGTCGAGT
CGACCTGCAAATGCGCACCCCCGGTACCAGCTGAAGACGCCCCAGGATCA
GACACCACTCAAATCCAGCTCCACACACTCAAATGTTTGCACGCGATAGA
ACAACTCGGGCGGCTCATGATACTCCCCGCTAATATCCACGCTCATACCC
CATTCATCATCTGCATGATTGCCAACGCCACCATTGCCCATTTAGCCGCC
TGTCGGTACGTATTTGCCGGGCCGGACCTCCAGCTTGGTCGTGAGAGAAT
CCGTCTCAGTATGGGTACTTTAAAGAGGCTGAGTGAACATTGGGGGCAGG
GAAAGAGAATTTATCGAGAGATGGGGATTGTTGCGAGGGAGATCCTGTCC
CTTGCGGATCGGGAGAAGGGTAGTCATGATCGAGTTGGATTCTCTACGAA
AGGTACATTATCAGGCATGCCGAATACACCTGCTGCACTGGAGTTTTCGT
CATTCGACATGCATAATATGAACGTGGCAGAGTTCGATTTCTGTGGGTAT
TTCGATGGGGCTATTGGTGAGGTAGTTGAGCCTGCTTCATTTCTGGTTGT
CTGAATGTCTACCCCCACCGCGAAATTGATCAAGTCCGGCGACATCTGGC
AGATCGAAGGGTACTATGCCTACCGCAACAAAGTCAGAAGAGGAGAGTCA
ACTAACATGATCAGTCGTCCCCGTGAGAACTTCCGAGTTCTCAATGTCTT
CCACCCGCCCAACATCCCCGGCAAATCCATGGTCGTCGGAGTGATCGACA
TGGATCCCAACGGCGCAACACCCTCACACACCCACGGAGGCGCTGCAGTG
GTGGCCATGGTGGCCTCAGGAACCGTCCTCAACCAAATGAATTGCGAGGA
GCCGATTGTTTCCAAGGCAGGGGATATCTGGTACGAGGCTCCCGGATGTC
ACCATGTTCGGTCTGAGAACGCTGGGGGTGGGTCAGAGACGGCGCGGTTT
TTCGCCGTGTTGATAGTGGACGATGAAGTGATCAGGGATGGGGTGCATAA
TATCTTTGTACTGGATGTTGAAAAAGCAGAGAAAGAGAGCGCACACCTGA
CACTCCTCAATCGAATTCCTCCCCTCTTTGGCTCCGTCTTCATTCTCACT
GTCTTCGAACATAAGACACACACATGCACTTCCTACAACAACATGAACGT
GCTCGAACTCGACCTGGCGGGCTCATTCCACCAGTCCAAACCAGCCCGTC
GTGTCGGCCTGGCATGTGCGCCCTGTCGCAAAAAACACCTCAGCTGCGAC
GCGAGAACCCCCGTATGTGCCCGCTGCATCGCTGACAATAAGCAATGCGT
CTATGAGAAGTCGCGTCGAGGCGGACGCCGTCGCAAGCCGTCAGAGTCAG
CATCAGGATTGGGATCCGGTGGGAATTCAACAGCATCGTCTGCACTTCTG
ACTCCGGGTCTCCCTGCCGATCAATTGTGGGTCCCGTCATCGTCACCGGA
GTCTGTCATGGTGCCAGCAGTTCAGGCACAGGCCAGGAGCACAACAAGTG
GCTCGATGACACATCCTGCACTCTCTGCAACGGCTGAAAATGATGCCTTA
AGAACAGATCGGCTGTATAACCTTTACTACACTTTTTTCCATCCCGCGCA
TCCATGCGTTTTACCATGGCGGTTCCTCAGCCAGCGCCTCGAGACAGAGC
GCGAGACAATACAACCGCTCCTTTATGTGATGCAGTATATCGGGGCACAC
TATGCAGATGACGTTGATGCGTCGCCACTGGCGACAATCTCCGAGTCACG
ATTAGCTCCTATACGCAGCAAACAAGCCGCTGCGACCGGGTTCGACGTGC
AGGCCATGATCCTCTACTCGATTGCAGTGTACTGGTGCGATGAAATAGAC
CGGGGTGTTAATTTACTCAAAGAAGCCATTCAAATGGCCTTGAATATACA
GATGAACAAGAAAGATTATGCTACACATTCTGGCCAGAATGACCCGATGC
TAGAAGAAAGCTGGCGTCGCACCTGGTGGCTTGTATACATCACGGATGCC
CACGTGGCTGGTAGCACCCATGTCTACCCATTTCGCACGAGCAATATAGA
CATGAGTGTCGATCTTCCATGCGAAGAGGAAGACTATGAAGCTGGGGTAA
TTTGCCCTCCGACAACCCTCGAAGTATACGACATCCGGGAATTTCTCCCA
GAAGCAGACCGACCCAGCTTCTCCTCTTACGCAGAGCTCATTGGCTTAAC
CCGTTCAATAGACAAAGCCTTAGCATCCGACTGGTCCAAAAACGCCGCCC
TGGTCCACACAATTTGCGAGAATGCCGACATCAGCGTCGCGGCCTGGCAC
TCGCTACTTCCACCCTGCAAGCGAGACCCGCTACGCAGCGACGGCACCGT
CGATGAAATCATGTTCAAAGCCAAGTTCATCCTCCACGCATACGCTATAG
AGATACATCGTCCATTATCAACCTTGGCGTACAGTTCCGTCGAGTCGACC
TGCAAATGCGCACCCCCGGTACCAGCTGAAGACGCCCCAGGATCAGACAC
CACTCAAATCCAGCTCCACACACTCAAATGTTTGCACGCGATAGAACAAC
TCGGGCGGCTCATGATACTCCCCGCTAATATCCACGCTCATACCCCATTC
ATCATCTGCATGATTGCCAACGCCACCATTGCCCATTTAGCCGCCTGTCG
GTACGTATTTGCCGGGCCGGACCTCCAGCTTGGTCGTGAGAGAATCCGTC
TCAGTATGGGTACTTTAAAGAGGCTGAGTGAACATTGGGGGCAGGGAAAG
AGAATTTATCGAGAGATGGGGATTGTTGCGAGGGAGATCCTGTCCCTTGC
GGATCGGGAGAAGGGTAGTCATGATCGAGTTGGATTCTCTACGAAAGGTA
CATTATCAGGCATGCCGAATACACCTGCTGCACTGGAGTTTTCGTCATTC
GACATGCATAATATGAACGTGGCAGAGTTCGATTTCTGTGGGTATTTCGA
TGGGGCTATTGGTGAGGTAGTTGAGCCTGCTTCATTTCTGGTTGTCTGAA
TGTCTACCCCCACCGCGAAATTGATCAAGTCCGGCGACATCTGGCAGATC
GAAGGGTACTATGCCTACCGCAACAAAGTCAGAAGAGGAGAGTCAACTAA
CATGATCAGTCGTCCCCGTGAGAACTTCCGAGTTCTCAATGTCTTCCACC
CGCCCAACATCCCCGGCAAATCCATGGTCGTCGGAGTGATCGACATGGAT
CCCAACGGCGCAACACCCTCACACACCCACGGAGGCGCTGCAGTGGTGGC
CATGGTGGCCTCAGGAACCGTCCTCAACCAAATGAATTGCGAGGAGCCGA
TTGTTTCCAAGGCAGGGGATATCTGGTACGAGGCTCCCGGATGTCACCAT
GTTCGGTCTGAGAACGCTGGGGGTGGGTCAGAGACGGCGCGGTTTTTCGC
CGTGTTGATAGTGGACGATGAAGTGATCAGGGATGGGGTGCATAATATCT
TTGTACTGGATGTTGAAAAAGCAGAGAAAGAGAGCGCACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001537KJC3_001537Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001537-T1KJC3_001537-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001537-T1.cdsKJC3_001537-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001537-T1.exon3KJC3_001537-T1.exon3Aspergillus niger KJC3exon
KJC3_001537-T1.exon2KJC3_001537-T1.exon2Aspergillus niger KJC3exon
KJC3_001537-T1.exon1KJC3_001537-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001537-T1.utr5p2KJC3_001537-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001537-T1.utr5p1KJC3_001537-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:4121060..4123723 -
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