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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1092..1852+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001540-T1 ID=KJC3_001540-T1|Name=KJC3_001540-T1|organism=Aspergillus niger KJC3|type=mRNA|length=761bp|location=Sequence derived from alignment at ch2:1092..1852+ (Aspergillus niger KJC3)
ATGAGTGAATACTTTGACACGAGCTACGCGATGTAAGTAGGTCCAGCCTG
GGTCTCATACAGCAATAGCCACTAATTCAATATTACAGTTTTGAAATCAT
AGGGTCGACATTTGTGAAGGCCAAACAGCCTTATCAGCCGCTGTTCTCGA
TGTCCCCTACTATCGACATCTTGAAGCGTTCTGAGTCCCAGACATGGATT
GGGTGCCCCGCAGCACTTCTCTACGTGCTTTCTCTCGTGAATGCGGCTGC
TTCGAGCTCTCACAAAATGCTACCAGGTTCGATTTACAATATTTATTCTC
ATCTGCGGAACTTCTCTCCAATGAAATGGGCAGTTGCGGGTGCGGAAATT
CATTACATAAAACCAAGATATCAATTTGCCTGTGTCTGGCAAGCAGCGAT
CGAGATATACGCACTACAGGTTCTCCCAGTTCTTTTCGAAATCGATCTTT
CCAACGAAAGGAGAATCAGCATTTCACTCAATTCGATCCTTCACCATCTC
AAATCTATAAACCCCACGGATGTCCATCTCAAAGGCATCCTATGGCCTGC
ATTCGTCATTGGCGCCGAAGTACAAACTATGTCTCAAATGGTACTCATTA
CTGATGTGTTTGGGCATCTGTGGACAGTATGGCACTGTTACAATGTGACG
AATGCCTTGAAGGTGCTTGAGAAGATTTGGGCTCGTCGAGCTATTGAAGG
GTCGTCTAGACGATGGATTGAGTATGTCTATGAGTGGGGTGAAGATTGGA
TGTTCATATAG back to topCoding sequence (CDS) from alignment at ch2:1092..1852+ >KJC3_001540-T1 ID=KJC3_001540-T1|Name=KJC3_001540-T1|organism=Aspergillus niger KJC3|type=CDS|length=1410bp|location=Sequence derived from alignment at ch2:1092..1852+ (Aspergillus niger KJC3)
ATGAGTGAATACTTTGACACGAGCTACGCGATTTTTGAAATCATAGGGTC
GACATTTGTGAAGGCCAAACAGCCTTATCAGCCGCTGTTCTCGATGTCCC
CTACTATCGACATCTTGAAGCGTTCTGAGTCCCAGACATGGATTGGGTGC
CCCGCAGCACTTCTCTACGTGCTTTCTCTCGTGAATGCGGCTGCTTCGAG
CTCTCACAAAATGCTACCAGGTTCGATTTACAATATTTATTCTCATCTGC
GGAACTTCTCTCCAATGAAATGGGCAGTTGCGGGTGCGGAAATTCATTAC
ATAAAACCAAGATATCAATTTGCCTGTGTCTGGCAAGCAGCGATCGAGAT
ATACGCACTACAGGTTCTCCCAGTTCTTTTCGAAATCGATCTTTCCAACG
AAAGGAGAATCAGCATTTCACTCAATTCGATCCTTCACCATCTCAAATCT
ATAAACCCCACGGATGTCCATCTCAAAGGCATCCTATGGCCTGCATTCGT
CATTGGCGCCGAAGTACAAACTATGTCTCAAATGGTACTCATTACTGATG
TGTTTGGGCATCTGTGGACAGTATGGCACTGTTACAATGTGACGAATGCC
TTGAAGGTGCTTGAGAAGATTTGGGCTCGTCGAGCTATTGAAGGGTCGTC
TAGACGATGGATTGAGTATGTCTATGAGTGGGGTGAAGATTGGATGTTCA
TATAGATGAGTGAATACTTTGACACGAGCTACGCGATTTTTGAAATCATA
GGGTCGACATTTGTGAAGGCCAAACAGCCTTATCAGCCGCTGTTCTCGAT
GTCCCCTACTATCGACATCTTGAAGCGTTCTGAGTCCCAGACATGGATTG
GGTGCCCCGCAGCACTTCTCTACGTGCTTTCTCTCGTGAATGCGGCTGCT
TCGAGCTCTCACAAAATGCTACCAGGTTCGATTTACAATATTTATTCTCA
TCTGCGGAACTTCTCTCCAATGAAATGGGCAGTTGCGGGTGCGGAAATTC
ATTACATAAAACCAAGATATCAATTTGCCTGTGTCTGGCAAGCAGCGATC
GAGATATACGCACTACAGGTTCTCCCAGTTCTTTTCGAAATCGATCTTTC
CAACGAAAGGAGAATCAGCATTTCACTCAATTCGATCCTTCACCATCTCA
AATCTATAAACCCCACGGATGTCCATCTCAAAGGCATCCTATGGCCTGCA
TTCGTCATTGGCGCCGAAGTACAAACTATGTCTCAAATGGTACTCATTAC
TGATGTGTTTGGGCATCTGTGGACAGTATGGCACTGTTACAATGTGACGA
ATGCCTTGAAGGTGCTTGAGAAGATTTGGGCTCGTCGAGCTATTGAAGGG
TCGTCTAGACGATGGATTGAGTATGTCTATGAGTGGGGTGAAGATTGGAT
GTTCATATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1092..1852 + |
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