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KJC3_001541-T1, KJC3_001541-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001541-T1
Unique NameKJC3_001541-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2343..3917-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001541-T1 ID=KJC3_001541-T1|Name=KJC3_001541-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1575bp|location=Sequence derived from alignment at ch2:2343..3917- (Aspergillus niger KJC3)
ATGGCTGCCGAGAATCTACACGGAGGGTTCCACACGCCGTGCAAAAGCAG
CTCTCGGTTAACTGTGCCAGGAAATCCTCAAGATGAATCACCATCTGCTC
GGATTGAGCGTCTTGGACGTGAACGTCCATCGGCATTCCCCAATCTGTGG
ACTGAACTCTTCTGCTTGTTTGGCATAATTATGTCACAGTTCTTGACCGA
ATTCTTCGTCTCGGGCTTCACAGTCATCTTGCCACCACTAGCCCGAGAGC
TGAAGATTCCCCAGGCTTCGCAGGTGTGGCCCGCGACTGCCTTTTCGCTT
GTAATTTCGAGCACTTTACTCATATTTGGTCGTCTTGGTGATATGTGCGG
AGGATACCCTCTCTTTTTCGCTGGCCTTGCGTGGCTTCTTATATGGAGCC
TAATCGCCGGATTCAGTGCTAGCCCGGTCATGTTAGACATTTGTCGAGCA
CTTCAGGGCCTCGGAGCTGCTGCCTTTCTCCCAACTGGAGTCATGATTAT
AGGCTCACTCTACCGGCCCGGGCCTCGTAAAAACCTTGTCTTCGCAATCT
ACGGCACCGCGGGTGTTCTGGGCTTTTTTGGTGGCATTGCCATTGCAGGG
ATCGTGGGTCAATTCTTACACTGGAGTTATTACTTTTGGATTGGCGCTGC
ACTTGCAGCGATAACGCTCATTGCATCAATATGTGCTATGCCATATTCGA
CTTTGGCAAACGATTCCCGAAAGAAAGTGAAAATGGACTATCTCGGTGCG
ATTTGCATTGTTTGCGGACTCGTTCTTACGATTTTCGCGATCACCCAATC
TGCACATGCACCCTCGGGATGGAAAACGCCATATGTCCTGGTCATTTTCC
TCCTAGGCATTATGTTCCTTGCCGGGACGTGGTATGTCGAAAAGAATGTT
GTCTCGGATCCACTTTTGCCTGCATCACTCTTCTCGGTGAAATCAATGAC
ACCTTTACTCATTGCCCTCCTCCTACTCTACGGAACCTGGGGTATTTTCT
CCGTCAATGGTTCACTCTACTTCCAAACCGTCTTGTCAGCTTCACCACTT
CAGGTTGTCCTGTGGTACATACCCATTGGCGTCGTTGGGCTTGTCGTCAG
TGTCATTGAAGGGTACATCTTACATCTCGTCCCTGGCCATGTTATCATGA
TAATCTCGGGCTTAGCCGCCGTTGGATCGCAACTCCTCCTCGCTTGTATT
CCACCTAGTGGTGGAAGCTACTGGGCATGGATCTTTCCATCGTCCATTCT
CAGCACTCTTGGCATCGACCTGTCTACTATCTTGATGACAGTTTTCATTA
CGACAGTCGTCCCATCTTCGCAGCAGGGACTGGCAGGGGGTGTGCTAAAC
TCCGTTCTGCAGCTTGGTGTCGCCTTAGTCCTCGGGTTAGCAGACATTAT
TCAGTCGGCCGTGGTCAGGGAGACTGGACTAGAGAAAAGCTATAAAGCAA
CATTCTGGTTCGGAGTCGGTGTTGCTGGAGCCAGTTTGATAATTCTGATG
ATCTGGGGCAGGATACCCAAAGCTGTCAGCTCGCTGACAGCCGATGAAGA
ACAGGAACAGGCTTCTTCGTCCTGA
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Coding sequence (CDS) from alignment at ch2:2343..3917-

>KJC3_001541-T1 ID=KJC3_001541-T1|Name=KJC3_001541-T1|organism=Aspergillus niger KJC3|type=CDS|length=1575bp|location=Sequence derived from alignment at ch2:2343..3917- (Aspergillus niger KJC3)
ATGGCTGCCGAGAATCTACACGGAGGGTTCCACACGCCGTGCAAAAGCAG
CTCTCGGTTAACTGTGCCAGGAAATCCTCAAGATGAATCACCATCTGCTC
GGATTGAGCGTCTTGGACGTGAACGTCCATCGGCATTCCCCAATCTGTGG
ACTGAACTCTTCTGCTTGTTTGGCATAATTATGTCACAGTTCTTGACCGA
ATTCTTCGTCTCGGGCTTCACAGTCATCTTGCCACCACTAGCCCGAGAGC
TGAAGATTCCCCAGGCTTCGCAGGTGTGGCCCGCGACTGCCTTTTCGCTT
GTAATTTCGAGCACTTTACTCATATTTGGTCGTCTTGGTGATATGTGCGG
AGGATACCCTCTCTTTTTCGCTGGCCTTGCGTGGCTTCTTATATGGAGCC
TAATCGCCGGATTCAGTGCTAGCCCGGTCATGTTAGACATTTGTCGAGCA
CTTCAGGGCCTCGGAGCTGCTGCCTTTCTCCCAACTGGAGTCATGATTAT
AGGCTCACTCTACCGGCCCGGGCCTCGTAAAAACCTTGTCTTCGCAATCT
ACGGCACCGCGGGTGTTCTGGGCTTTTTTGGTGGCATTGCCATTGCAGGG
ATCGTGGGTCAATTCTTACACTGGAGTTATTACTTTTGGATTGGCGCTGC
ACTTGCAGCGATAACGCTCATTGCATCAATATGTGCTATGCCATATTCGA
CTTTGGCAAACGATTCCCGAAAGAAAGTGAAAATGGACTATCTCGGTGCG
ATTTGCATTGTTTGCGGACTCGTTCTTACGATTTTCGCGATCACCCAATC
TGCACATGCACCCTCGGGATGGAAAACGCCATATGTCCTGGTCATTTTCC
TCCTAGGCATTATGTTCCTTGCCGGGACGTGGTATGTCGAAAAGAATGTT
GTCTCGGATCCACTTTTGCCTGCATCACTCTTCTCGGTGAAATCAATGAC
ACCTTTACTCATTGCCCTCCTCCTACTCTACGGAACCTGGGGTATTTTCT
CCGTCAATGGTTCACTCTACTTCCAAACCGTCTTGTCAGCTTCACCACTT
CAGGTTGTCCTGTGGTACATACCCATTGGCGTCGTTGGGCTTGTCGTCAG
TGTCATTGAAGGGTACATCTTACATCTCGTCCCTGGCCATGTTATCATGA
TAATCTCGGGCTTAGCCGCCGTTGGATCGCAACTCCTCCTCGCTTGTATT
CCACCTAGTGGTGGAAGCTACTGGGCATGGATCTTTCCATCGTCCATTCT
CAGCACTCTTGGCATCGACCTGTCTACTATCTTGATGACAGTTTTCATTA
CGACAGTCGTCCCATCTTCGCAGCAGGGACTGGCAGGGGGTGTGCTAAAC
TCCGTTCTGCAGCTTGGTGTCGCCTTAGTCCTCGGGTTAGCAGACATTAT
TCAGTCGGCCGTGGTCAGGGAGACTGGACTAGAGAAAAGCTATAAAGCAA
CATTCTGGTTCGGAGTCGGTGTTGCTGGAGCCAGTTTGATAATTCTGATG
ATCTGGGGCAGGATACCCAAAGCTGTCAGCTCGCTGACAGCCGATGAAGA
ACAGGAACAGGCTTCTTCGTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001541KJC3_001541Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001541-T1.cdsKJC3_001541-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001541-T1.exon1KJC3_001541-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001541-T1KJC3_001541-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2343..3917 -
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