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KJC3_001556-T1, KJC3_001556-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001556-T1
Unique NameKJC3_001556-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:53556..55021+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001556-T1 ID=KJC3_001556-T1|Name=KJC3_001556-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1466bp|location=Sequence derived from alignment at ch2:53556..55021+ (Aspergillus niger KJC3)
CCGAGGCTGAGCAGTTCAGCTGGAATGGGTTACACATCCAAGGTCGTCCG
GCAAGGCTGACAGGTGAACAGTGTCTTAAAATGATTAAACATCAAGATAG
ACATGTATGCTAGCTGTAGGTACAACATTGGCCGCATATAAGACTAAGTC
AGTACGCCCCTCTTTGATTCTCCAGTCCCTCCCTCCTTTCTTCCAACGTT
CAATCTTTATAACGTGATCTCAAGCCAAAGTGAATAGTATACCATGGTTG
GACAAGGAAGCTATCAGCTGGCGAGGAGCGATGGCCCCCCTCCTTTACCT
CTTGATCTTCGCGAACACAAATTACATATATCTTTGCAATGGGGGATTAT
TTTACTCACGTCCTGTATAGCACCATTGGTGCTCTATCCAAGTTTACACT
GGGGGGCGGATCTATCCCTAAAGATTTGTCTGTGTCCCATCTATGTCTTC
AAGCTGGTCTTGCCCATATCTTATGATTGGTACTAATGCATCGCGATATC
AGCTCTTAGCGTATCCAGTGCAATCCTAGGGGCATCGACCTTATACTCGT
TGGGCATACGAACATGGCGACTATTCAAATCGACATCGAATTGCCGACCC
CCTACATCTGAAAGTCGATGGAATGTATGCTATATATTTCCAGCCTACTT
CTGAAATATGACAAACTAGGCTCTACTAACACACTCTTCTTCCCTTCCAT
CATAAAGTTTGACTTCTTCCACTGGAACTATCTTCTGGGGTTTGTGCTCG
TCACAATCATTATTGTGGTTGGCTTGACGGAAGATCCTCCTAGTGTACGA
ATGACATCTTTGCCACCGTCTATTCTGCTCGTGCAAGTTGGCCTCACACT
CGTCATTGTCGGAGTTCTGGCAAAGCTTCGCGTACGGCAACCATTTCCAG
TGTCTTCTATGCCCGCAGGTACAGCATTTCGTCCAGGTATCTTAGTGATC
ATCGAAGATGTCGTTGCGGTGGACGGGGGCCGAGGCAGGGCATACCGTTC
AGCCCTAATGGAAAGGTATGCAGCCAGCTTACGGTTCCGACGACTAATTG
AGAATCTCAATTGGTTCTGGGGATTTGGTGGGCTCCTGATGGGAATTGTT
TTGATATGTATACTTGCATCGGTTGGCAGTCAGACCTTTGCGTTTGGGTT
GGGTAAGTTCATGATTGGTCTTTTTCCTGTCGTTATGTACCCCACTTTAA
GGCCCATATCCTGAGATTTCTCTTATACCGAGAGTGAAGGCTAACATAAT
TCTTATTGTTTTTTTCGGATAGGGTGGATTGTCCCATGGATTTGGGCAGG
TGTCTGGGCAGTCATCACGACTTACTGGGTGAAATCTGCGCTGAGGGAAG
AGAAGCTTACCTGGTCGGAGAGCCAGAAAGTAGTGGAGGTGTAGACCTTA
GCTTCTGGATATTTTACTTAACGGGCTCGACGAGGTATGAGGATATGTAT
CGGATTCAAATGAAGG
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Coding sequence (CDS) from alignment at ch2:53556..55021+

>KJC3_001556-T1 ID=KJC3_001556-T1|Name=KJC3_001556-T1|organism=Aspergillus niger KJC3|type=CDS|length=3492bp|location=Sequence derived from alignment at ch2:53556..55021+ (Aspergillus niger KJC3)
ATGGTTGGACAAGGAAGCTATCAGCTGGCGAGGAGCGATGGCCCCCCTCC
TTTACCTCTTGATCTTCGCGAACACAAATTACATATATCTTTGCAATGGG
GGATTATTTTACTCACGTCCTGTATAGCACCATTGGTGCTCTATCCAAGT
TTACACTGGGGGGCGGATCTATCCCTAAAGATTTCTCTTAGCGTATCCAG
TGCAATCCTAGGGGCATCGACCTTATACTCGTTGGGCATACGAACATGGC
GACTATTCAAATCGACATCGAATTGCCGACCCCCTACATCTGAAAGTCGA
TGGAATTTTGACTTCTTCCACTGGAACTATCTTCTGGGGTTTGTGCTCGT
CACAATCATTATTGTGGTTGGCTTGACGGAAGATCCTCCTAGTGTACGAA
TGACATCTTTGCCACCGTCTATTCTGCTCGTGCAAGTTGGCCTCACACTC
GTCATTGTCGGAGTTCTGGCAAAGCTTCGCGTACGGCAACCATTTCCAGT
GTCTTCTATGCCCGCAGGTACAGCATTTCGTCCAGGTATCTTAGTGATCA
TCGAAGATGTCGTTGCGGTGGACGGGGGCCGAGGCAGGGCATACCGTTCA
GCCCTAATGGAAAGGTATGCAGCCAGCTTACGGTTCCGACGACTAATTGA
GAATCTCAATTGGTTCTGGGGATTTGGTGGGCTCCTGATGGGAATTGTTT
TGATATGTATACTTGCATCGGTTGGCAGTCAGACCTTTGCGTTTGGGTTG
GGGTGGATTGTCCCATGGATTTGGGCAGGTGTCTGGGCAGTCATCACGAC
TTACTGGGTGAAATCTGCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGA
GCCAGAAAGTAGTGGAGGTGTAGATGGTTGGACAAGGAAGCTATCAGCTG
GCGAGGAGCGATGGCCCCCCTCCTTTACCTCTTGATCTTCGCGAACACAA
ATTACATATATCTTTGCAATGGGGGATTATTTTACTCACGTCCTGTATAG
CACCATTGGTGCTCTATCCAAGTTTACACTGGGGGGCGGATCTATCCCTA
AAGATTTCTCTTAGCGTATCCAGTGCAATCCTAGGGGCATCGACCTTATA
CTCGTTGGGCATACGAACATGGCGACTATTCAAATCGACATCGAATTGCC
GACCCCCTACATCTGAAAGTCGATGGAATTTTGACTTCTTCCACTGGAAC
TATCTTCTGGGGTTTGTGCTCGTCACAATCATTATTGTGGTTGGCTTGAC
GGAAGATCCTCCTAGTGTACGAATGACATCTTTGCCACCGTCTATTCTGC
TCGTGCAAGTTGGCCTCACACTCGTCATTGTCGGAGTTCTGGCAAAGCTT
CGCGTACGGCAACCATTTCCAGTGTCTTCTATGCCCGCAGGTACAGCATT
TCGTCCAGGTATCTTAGTGATCATCGAAGATGTCGTTGCGGTGGACGGGG
GCCGAGGCAGGGCATACCGTTCAGCCCTAATGGAAAGGTATGCAGCCAGC
TTACGGTTCCGACGACTAATTGAGAATCTCAATTGGTTCTGGGGATTTGG
TGGGCTCCTGATGGGAATTGTTTTGATATGTATACTTGCATCGGTTGGCA
GTCAGACCTTTGCGTTTGGGTTGGGGTGGATTGTCCCATGGATTTGGGCA
GGTGTCTGGGCAGTCATCACGACTTACTGGGTGAAATCTGCGCTGAGGGA
AGAGAAGCTTACCTGGTCGGAGAGCCAGAAAGTAGTGGAGGTGTAGATGG
TTGGACAAGGAAGCTATCAGCTGGCGAGGAGCGATGGCCCCCCTCCTTTA
CCTCTTGATCTTCGCGAACACAAATTACATATATCTTTGCAATGGGGGAT
TATTTTACTCACGTCCTGTATAGCACCATTGGTGCTCTATCCAAGTTTAC
ACTGGGGGGCGGATCTATCCCTAAAGATTTCTCTTAGCGTATCCAGTGCA
ATCCTAGGGGCATCGACCTTATACTCGTTGGGCATACGAACATGGCGACT
ATTCAAATCGACATCGAATTGCCGACCCCCTACATCTGAAAGTCGATGGA
ATTTTGACTTCTTCCACTGGAACTATCTTCTGGGGTTTGTGCTCGTCACA
ATCATTATTGTGGTTGGCTTGACGGAAGATCCTCCTAGTGTACGAATGAC
ATCTTTGCCACCGTCTATTCTGCTCGTGCAAGTTGGCCTCACACTCGTCA
TTGTCGGAGTTCTGGCAAAGCTTCGCGTACGGCAACCATTTCCAGTGTCT
TCTATGCCCGCAGGTACAGCATTTCGTCCAGGTATCTTAGTGATCATCGA
AGATGTCGTTGCGGTGGACGGGGGCCGAGGCAGGGCATACCGTTCAGCCC
TAATGGAAAGGTATGCAGCCAGCTTACGGTTCCGACGACTAATTGAGAAT
CTCAATTGGTTCTGGGGATTTGGTGGGCTCCTGATGGGAATTGTTTTGAT
ATGTATACTTGCATCGGTTGGCAGTCAGACCTTTGCGTTTGGGTTGGGGT
GGATTGTCCCATGGATTTGGGCAGGTGTCTGGGCAGTCATCACGACTTAC
TGGGTGAAATCTGCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGAGCCA
GAAAGTAGTGGAGGTGTAGATGGTTGGACAAGGAAGCTATCAGCTGGCGA
GGAGCGATGGCCCCCCTCCTTTACCTCTTGATCTTCGCGAACACAAATTA
CATATATCTTTGCAATGGGGGATTATTTTACTCACGTCCTGTATAGCACC
ATTGGTGCTCTATCCAAGTTTACACTGGGGGGCGGATCTATCCCTAAAGA
TTTCTCTTAGCGTATCCAGTGCAATCCTAGGGGCATCGACCTTATACTCG
TTGGGCATACGAACATGGCGACTATTCAAATCGACATCGAATTGCCGACC
CCCTACATCTGAAAGTCGATGGAATTTTGACTTCTTCCACTGGAACTATC
TTCTGGGGTTTGTGCTCGTCACAATCATTATTGTGGTTGGCTTGACGGAA
GATCCTCCTAGTGTACGAATGACATCTTTGCCACCGTCTATTCTGCTCGT
GCAAGTTGGCCTCACACTCGTCATTGTCGGAGTTCTGGCAAAGCTTCGCG
TACGGCAACCATTTCCAGTGTCTTCTATGCCCGCAGGTACAGCATTTCGT
CCAGGTATCTTAGTGATCATCGAAGATGTCGTTGCGGTGGACGGGGGCCG
AGGCAGGGCATACCGTTCAGCCCTAATGGAAAGGTATGCAGCCAGCTTAC
GGTTCCGACGACTAATTGAGAATCTCAATTGGTTCTGGGGATTTGGTGGG
CTCCTGATGGGAATTGTTTTGATATGTATACTTGCATCGGTTGGCAGTCA
GACCTTTGCGTTTGGGTTGGGGTGGATTGTCCCATGGATTTGGGCAGGTG
TCTGGGCAGTCATCACGACTTACTGGGTGAAATCTGCGCTGAGGGAAGAG
AAGCTTACCTGGTCGGAGAGCCAGAAAGTAGTGGAGGTGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001556KJC3_001556Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001556-T1KJC3_001556-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001556-T1.utr5p1KJC3_001556-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001556-T1.exon1KJC3_001556-T1.exon1Aspergillus niger KJC3exon
KJC3_001556-T1.exon2KJC3_001556-T1.exon2Aspergillus niger KJC3exon
KJC3_001556-T1.exon3KJC3_001556-T1.exon3Aspergillus niger KJC3exon
KJC3_001556-T1.exon4KJC3_001556-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001556-T1.cdsKJC3_001556-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001556-T1.utr3p1KJC3_001556-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:53556..55021 +
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