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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:83572..84641- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001566-T1 ID=KJC3_001566-T1|Name=KJC3_001566-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1070bp|location=Sequence derived from alignment at ch2:83572..84641- (Aspergillus niger KJC3)
ATGTCCTCCCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGG
AGCCAGCTGGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAA
CAGACCCAGCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAG
TATTGCTCCGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAA
GAATTACACATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACA
TGATTCAAGAAGTCAGTGGCCGGTCATCCTTAGAGCTCCTCTGCAGTTCG
TCATGCATGCTAACTATTATGATAGAATGGGCCAGAAAGACTAGACTTCA
AACGCCGTCTATTCGCGCACTTGGACGCAAAGACCCCTTCCCATATCCTC
ATCGCATCCTCCTCCTCCGGCCTTCCGTCGTCAGAATTTGTCACAGAATG
CACAAATAACCCATCTCGAATCCTCATCGGTCACCCTTTCAACCCTCCCC
ACTTAGTACCTCTGGTCGAGGTCGTGCCTCATCCAGGAACAAGCCAAGAC
TATGTGGCGGCTGCATACCAATTCTACAAGGGTCTAGACAAGGATCCGGT
GATTGTGAATCAAGAAACTCCTGGCTTTATCGCCAACCGGTTACAAGCCG
CAATGTGTGCCGAGGCATACAGCCTCGTTACACGAAGGATTGTCTCTGCA
GAAGACCTGGGTGAGCATTAATCTTCCTCCTGTTGCAATATGGAAGAACT
TCTAATGGCGTATAGACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGG
GCGCTGACAGGGCCAATTATGACGAATACCCTCGGCGGCGGGGGAGACTT
CACCCATTTTATGGATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACG
ATATGGAACAGAATAAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGC
TTGAAGAAGAACGTCAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGT
TGAGGGGGATCGTGATGTGCTGTTGACTGATTTGGTTAAGCGTAAACTGG
ACCAAACGGAGAATCAATAG back to topCoding sequence (CDS) from alignment at ch2:83572..84641- >KJC3_001566-T1 ID=KJC3_001566-T1|Name=KJC3_001566-T1|organism=Aspergillus niger KJC3|type=CDS|length=2853bp|location=Sequence derived from alignment at ch2:83572..84641- (Aspergillus niger KJC3)
ACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCCA
ATTATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGGA
TCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAATA
AATTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGTC
AATGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTGA
TGTGCTGTTGACTGATTTGGTTAAGCGTAAACTGGACCAAACGGAGAATC
AATAGAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTCGCGCAC
TTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTCCTCCGG
CCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCATCTCGAA
TCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTGGTCGAG
GTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGCATACCA
ATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAGAAACTC
CTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAGGCATAC
AGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGATGTCCTCCC
CAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGGAGCCAGCTGG
ACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAACAGACCCAGC
GCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAGTATTGCTCCG
CAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAAGAATTACACA
TTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACATGATTCAAGA
AACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCC
AATTATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGG
ATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAAT
AAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGT
CAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTG
ATGTGCTGTTGACTGATTTGGTTAAGCGTAAACTGGACCAAACGGAGAAT
CAATAGAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTCGCGCA
CTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTCCTCCG
GCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCATCTCGA
ATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTGGTCGA
GGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGCATACC
AATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAGAAACT
CCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAGGCATA
CAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGATGTCCTCC
CCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGGAGCCAGCTG
GACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAACAGACCCAG
CGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAGTATTGCTCC
GCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAAGAATTACAC
ATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACATGATTCAAG
AAACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGC
CAATTATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATG
GATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAA
TAAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACG
TCAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGT
GATGTGCTGTTGACTGATTTGGTTAAGCGTAAACTGGACCAAACGGAGAA
TCAATAGAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTCGCGC
ACTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTCCTCC
GGCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCATCTCG
AATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTGGTCG
AGGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGCATAC
CAATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAGAAAC
TCCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAGGCAT
ACAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGATGTCCTC
CCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGGAGCCAGCT
GGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAACAGACCCA
GCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAGTATTGCTC
CGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAAGAATTACA
CATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACATGATTCAA
GAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006631 | fatty acid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR006176 |
| DBxref | InterPro:IPR006108 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:83572..84641 - |
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